MELO3C023055 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C023055
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Dead box ATP-dependent RNA helicase, putative
Location	chr5 : 6697366 .. 6698202 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCAGAATCAATGCAGTCTATGTCTTCTCAAAAGAGAAGGCTAAAGAGGAAGAAAACCCAGAAAGATCCAGAATTCGAACGTCTCGATTCACTCCCATGGAATTCATCGATCCCTATCGACGACACTTTATCTGCATTTATTGGTTCCAATGATCTCGAAGGAGGTTTGTACTTGTTTGTTCGTTCTTCTGTATGCTTTTCTTTAGAGGTTTTCGTTATATTTGTGTGCATTCTAAACGAATACAGTTGTGTCTGTGACCATTACTTTCTGCAGTCTTCAAATGTATGCATCTATATCGTTTGTTTATTGTTACAACCTCTGAACATTTCTTCATCTTGTCAAGTTATTATTCAGTTTATAGTTTTATATATCTTTTTTAATCGGCAGTGCTGACAAATAATTGGGATGGGCATTGAATTATTATTATTTTTTAAATTGGCTTGACACATATTATTGATGCTGAACGAAAATTTATGTTGGGTTTTACTGTTCAATTGAACCCTTTAGTAATCAGTTCAAATATTTTAATATACTATAGGCTTTCTTTCCCTTGAGGAGATTGACGAAGCTGAGTATGGCTTGGTGATTCCTGAACCTGACACAATGAAACACAAATTGATACCAAAAGCCAGTGGAAATTCAAGGAAAGAGGAGCAAAATAATGCTGATTTCTGTGGGGATGCATCACGAGGTAGCAATGATAGTATTGATAAGGAAGCTGTGGGGCACAACGTGAATACGAAAACTAGCAAAAAAGGGAAAAAAAAGGAGAAGAAGAAAAAGAAGAAAAAAAGGTCATTCTTGAAGTCCCAACGACAGAGGAAGCTGTAG

mRNA sequence

ATGGCCGCAGAATCAATGCAGTCTATGTCTTCTCAAAAGAGAAGGCTAAAGAGGAAGAAAACCCAGAAAGATCCAGAATTCGAACGTCTCGATTCACTCCCATGGAATTCATCGATCCCTATCGACGACACTTTATCTGCATTTATTGGTTCCAATGATCTCGAAGGAGGCTTTCTTTCCCTTGAGGAGATTGACGAAGCTGAGTATGGCTTGGTGATTCCTGAACCTGACACAATGAAACACAAATTGATACCAAAAGCCAGTGGAAATTCAAGGAAAGAGGAGCAAAATAATGCTGATTTCTGTGGGGATGCATCACGAGGTAGCAATGATAGTATTGATAAGGAAGCTGTGGGGCACAACGTGAATACGAAAACTAGCAAAAAAGGGAAAAAAAAGGAGAAGAAGAAAAAGAAGAAAAAAAGGTCATTCTTGAAGTCCCAACGACAGAGGAAGCTGTAG

Coding sequence (CDS)

ATGGCCGCAGAATCAATGCAGTCTATGTCTTCTCAAAAGAGAAGGCTAAAGAGGAAGAAAACCCAGAAAGATCCAGAATTCGAACGTCTCGATTCACTCCCATGGAATTCATCGATCCCTATCGACGACACTTTATCTGCATTTATTGGTTCCAATGATCTCGAAGGAGGCTTTCTTTCCCTTGAGGAGATTGACGAAGCTGAGTATGGCTTGGTGATTCCTGAACCTGACACAATGAAACACAAATTGATACCAAAAGCCAGTGGAAATTCAAGGAAAGAGGAGCAAAATAATGCTGATTTCTGTGGGGATGCATCACGAGGTAGCAATGATAGTATTGATAAGGAAGCTGTGGGGCACAACGTGAATACGAAAACTAGCAAAAAAGGGAAAAAAAAGGAGAAGAAGAAAAAGAAGAAAAAAAGGTCATTCTTGAAGTCCCAACGACAGAGGAAGCTGTAG

Protein sequence

MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLSLEEIDEAEYGLVIPEPDTMKHKLIPKASGNSRKEEQNNADFCGDASRGSNDSIDKEAVGHNVNTKTSKKGKKKEKKKKKKKRSFLKSQRQRKL*

Homology

[Close]

BLAST of MELO3C023055 vs. Swiss-Prot
Match: RH13_ARATH (DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana GN=RH13 PE=2 SV=3)

HSP 1 Score: 92.4 bits (228), Expect = 4.5e-18
Identity = 57/155 (36.77%), Postives = 82/155 (52.90%), Query Frame = 1


Query: 1   MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDT------LSAFIGSNDL 60
           M     +S   +KR  +  K +++ +FER+DSLPW+SSIPI +        + F GS  L
Sbjct: 1   MVTGDKESSLMKKRNKRSHKRKREEDFERIDSLPWSSSIPIGEDDEGESFSTLFSGSGQL 60

Query: 61  EGGFLSLEEIDEAEYGLVIP--EPDTMKHKLIPKASGNSRKE-----EQNNADFCGDASR 120
           +GGFLSLEEIDEA+Y L +P  E +  + K  P+   ++ +      E   A+  G+   
Sbjct: 61  DGGFLSLEEIDEADYHLTLPTIESEITERKQSPEDDDDTNETVDEMIEGEEAEEDGEGRD 120

Query: 121 GSNDSIDKEAVGHNVNTKTSKKGKKKEKKKKKKKR 143
             +D  D+E            K KKKEKKKKK+K+
Sbjct: 121 DEDDEDDEETRKKKEKKAKRNKEKKKEKKKKKQKK 155

[Close]

BLAST of MELO3C023055 vs. TrEMBL
Match: A0A0A0LNK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169750 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 3.3e-68
Identity = 131/141 (92.91%), Postives = 136/141 (96.45%), Query Frame = 1


Query: 1   MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS 60
           MAAES QS SSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS
Sbjct: 1   MAAESTQSTSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS 60

Query: 61  LEEIDEAEYGLVIPEPDTMKHKLIPKASGNSRKEEQNNADFCGDASRGSNDSIDKEAVGH 120
           LEEIDEAEYG+VIPEPDT KHKLIPKASGN+RKEEQNNAD+C DASRGSNDSIDKEA GH
Sbjct: 61  LEEIDEAEYGMVIPEPDTRKHKLIPKASGNTRKEEQNNADYCEDASRGSNDSIDKEAAGH 120

Query: 121 NVNTKTSKKGKKKEKKKKKKK 142
           NVNTKTSKKGKK++KKKKKKK
Sbjct: 121 NVNTKTSKKGKKEKKKKKKKK 141

[Close]

BLAST of MELO3C023055 vs. TrEMBL
Match: I1KIF1_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_07G074800 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 9.2e-26
Identity = 71/147 (48.30%), Postives = 93/147 (63.27%), Query Frame = 1


Query: 2   AAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPI---DDTLSAFIGSNDLEGGF 61
           AA +  + S +K + KR   + DPE +RLDSLPWNS++P    DD  S FIGSN+LEGGF
Sbjct: 3   AAAATANSSQRKPKRKRASAKSDPELDRLDSLPWNSALPQNDDDDAFSLFIGSNELEGGF 62

Query: 62  LSLEEIDEAEYGLVIPEPDTMKHKLIPKAS---GNSRKEEQNNADFCGDASRGSNDSIDK 121
           LSLEEIDEAEYGL IPEP+  K K   K S    N +K++Q+  D     S  S+D++ +
Sbjct: 63  LSLEEIDEAEYGLSIPEPEVDKRKTKKKKSEQNENVKKQQQDGVD-----SACSDDTVVE 122

Query: 122 EAVGHNVNTKTSKKGKKKEKKKKKKKR 143
             +  ++ +K  KK KKK K KKK  R
Sbjct: 123 AELDESLKSKEKKKKKKKTKNKKKDAR 144

[Close]

BLAST of MELO3C023055 vs. TrEMBL
Match: V7AMY8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G094600g PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-24
Identity = 73/151 (48.34%), Postives = 97/151 (64.24%), Query Frame = 1


Query: 4   ESMQSMSSQKRRLKRKKT--QKDPEFERLDSLPWNSSIPIDD---TLSAFIGSNDLEGGF 63
           E+    +S +R+LKRK+T  + DPEF+RL+SLPWNSS+P +D     S FIGSN+LEGGF
Sbjct: 2   EAATVATSSQRKLKRKRTLAKSDPEFDRLNSLPWNSSLPQNDDDGAFSIFIGSNELEGGF 61

Query: 64  LSLEEIDEAEYGLVIPEPDTMKHKLIPKASGNSRKEEQNNADFCGDASRGSNDSIDKEAV 123
           LSLEEIDEAEYGL IPEP+  K K   K S      ++   D  G A   S+D ++ E  
Sbjct: 62  LSLEEIDEAEYGLNIPEPEYGKRK-TKKKSVQDEDVKKQQQDGVGGA---SSDEVEAEL- 121

Query: 124 GHNVNTKTSKKGKKKEKKKKKKKRSFLKSQR 150
             + + K  +K KKK+KKKK KK+   + Q+
Sbjct: 122 --DESVKAKEKKKKKKKKKKTKKKDATEDQK 145

[Close]

BLAST of MELO3C023055 vs. TrEMBL
Match: A0A0S3SY31_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G148000 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 6.6e-24
Identity = 69/144 (47.92%), Postives = 92/144 (63.89%), Query Frame = 1


Query: 1   MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPI---DDTLSAFIGSNDLEGG 60
           M A ++ + S +K + KR   + DPE ERL+SLPWNSS+P    DD  S FIG+N+LEGG
Sbjct: 1   MEAATVATSSLKKLKRKRNLAKSDPELERLNSLPWNSSLPQNDDDDAFSLFIGTNELEGG 60

Query: 61  FLSLEEIDEAEYGLVIPEPDTMKHKLIPKASGNS--RKEEQNNADFCGDASRGSNDSIDK 120
           FLSLEEIDEAEYGL IPEP+  K K   K+  N   +K++Q+  D        S+D ++ 
Sbjct: 61  FLSLEEIDEAEYGLNIPEPEDGKRKTKKKSIQNEDVKKQQQDGGD------GASSDEVEA 120

Query: 121 EAVGHNVNTKTSKKGKKKEKKKKK 140
           E +  +V  K  KK KKK+ KKK+
Sbjct: 121 E-LDESVKAKEKKKKKKKKTKKKE 137

[Close]

BLAST of MELO3C023055 vs. TrEMBL
Match: A0A0L9VR32_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g037000 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.1e-23
Identity = 69/144 (47.92%), Postives = 92/144 (63.89%), Query Frame = 1


Query: 1   MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPI---DDTLSAFIGSNDLEGG 60
           M A ++ + S +K + KR   + DPE ERL+SLPWNSS+P    DD  S FIG+N+LEGG
Sbjct: 1   MEAATVATSSLKKLKRKRNLAKGDPELERLNSLPWNSSLPQNDDDDAFSLFIGTNELEGG 60

Query: 61  FLSLEEIDEAEYGLVIPEPDTMKHKLIPKASGNS--RKEEQNNADFCGDASRGSNDSIDK 120
           FLSLEEIDEAEYGL IPEP+  K K   K+  N   +K++Q+  D        S+D ++ 
Sbjct: 61  FLSLEEIDEAEYGLNIPEPEDGKRKTKKKSIQNEDVKKQQQDGGD------GASSDEVEA 120

Query: 121 EAVGHNVNTKTSKKGKKKEKKKKK 140
           E +  +V  K  KK KKK+ KKK+
Sbjct: 121 E-LDESVKAKEKKKKKKKKTKKKE 137

[Close]

BLAST of MELO3C023055 vs. TAIR10
Match: AT3G16840.1 (AT3G16840.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 92.4 bits (228), Expect = 2.6e-19
Identity = 57/155 (36.77%), Postives = 82/155 (52.90%), Query Frame = 1


Query: 1   MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDT------LSAFIGSNDL 60
           M     +S   +KR  +  K +++ +FER+DSLPW+SSIPI +        + F GS  L
Sbjct: 1   MVTGDKESSLMKKRNKRSHKRKREEDFERIDSLPWSSSIPIGEDDEGESFSTLFSGSGQL 60

Query: 61  EGGFLSLEEIDEAEYGLVIP--EPDTMKHKLIPKASGNSRKE-----EQNNADFCGDASR 120
           +GGFLSLEEIDEA+Y L +P  E +  + K  P+   ++ +      E   A+  G+   
Sbjct: 61  DGGFLSLEEIDEADYHLTLPTIESEITERKQSPEDDDDTNETVDEMIEGEEAEEDGEGRD 120

Query: 121 GSNDSIDKEAVGHNVNTKTSKKGKKKEKKKKKKKR 143
             +D  D+E            K KKKEKKKKK+K+
Sbjct: 121 DEDDEDDEETRKKKEKKAKRNKEKKKEKKKKKQKK 155

[Close]

BLAST of MELO3C023055 vs. NCBI nr
Match: gi|659121594|ref|XP_008460737.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 1.3e-70
Identity = 134/141 (95.04%), Postives = 140/141 (99.29%), Query Frame = 1


Query: 1   MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS 60
           MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS
Sbjct: 1   MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS 60

Query: 61  LEEIDEAEYGLVIPEPDTMKHKLIPKASGNSRKEEQNNADFCGDASRGSNDSIDKEAVGH 120
           LEEIDEAEYGLVIPEPDTMKHKLIPKASGNSRKEEQNNADFCGDASRGSNDSIDKEAVGH
Sbjct: 61  LEEIDEAEYGLVIPEPDTMKHKLIPKASGNSRKEEQNNADFCGDASRGSNDSIDKEAVGH 120

Query: 121 NVNTKTSKKGKKKEKKKKKKK 142
           NVNTKTSKKGK++ +K++KK+
Sbjct: 121 NVNTKTSKKGKRRRRKRRKKE 141

[Close]

BLAST of MELO3C023055 vs. NCBI nr
Match: gi|449458872|ref|XP_004147170.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 4.8e-68
Identity = 131/141 (92.91%), Postives = 136/141 (96.45%), Query Frame = 1


Query: 1   MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS 60
           MAAES QS SSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS
Sbjct: 1   MAAESTQSTSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS 60

Query: 61  LEEIDEAEYGLVIPEPDTMKHKLIPKASGNSRKEEQNNADFCGDASRGSNDSIDKEAVGH 120
           LEEIDEAEYG+VIPEPDT KHKLIPKASGN+RKEEQNNAD+C DASRGSNDSIDKEA GH
Sbjct: 61  LEEIDEAEYGMVIPEPDTRKHKLIPKASGNTRKEEQNNADYCEDASRGSNDSIDKEAAGH 120

Query: 121 NVNTKTSKKGKKKEKKKKKKK 142
           NVNTKTSKKGKK++KKKKKKK
Sbjct: 121 NVNTKTSKKGKKEKKKKKKKK 141

[Close]

BLAST of MELO3C023055 vs. NCBI nr
Match: gi|700206432|gb|KGN61551.1| (hypothetical protein Csa_2G169750 [Cucumis sativus])

HSP 1 Score: 265.8 bits (678), Expect = 4.8e-68
Identity = 131/141 (92.91%), Postives = 136/141 (96.45%), Query Frame = 1


Query: 1   MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS 60
           MAAES QS SSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS
Sbjct: 1   MAAESTQSTSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPIDDTLSAFIGSNDLEGGFLS 60

Query: 61  LEEIDEAEYGLVIPEPDTMKHKLIPKASGNSRKEEQNNADFCGDASRGSNDSIDKEAVGH 120
           LEEIDEAEYG+VIPEPDT KHKLIPKASGN+RKEEQNNAD+C DASRGSNDSIDKEA GH
Sbjct: 61  LEEIDEAEYGMVIPEPDTRKHKLIPKASGNTRKEEQNNADYCEDASRGSNDSIDKEAAGH 120

Query: 121 NVNTKTSKKGKKKEKKKKKKK 142
           NVNTKTSKKGKK++KKKKKKK
Sbjct: 121 NVNTKTSKKGKKEKKKKKKKK 141

[Close]

BLAST of MELO3C023055 vs. NCBI nr
Match: gi|356520440|ref|XP_003528870.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine max])

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-25
Identity = 71/147 (48.30%), Postives = 93/147 (63.27%), Query Frame = 1


Query: 2   AAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPI---DDTLSAFIGSNDLEGGF 61
           AA +  + S +K + KR   + DPE +RLDSLPWNS++P    DD  S FIGSN+LEGGF
Sbjct: 3   AAAATANSSQRKPKRKRASAKSDPELDRLDSLPWNSALPQNDDDDAFSLFIGSNELEGGF 62

Query: 62  LSLEEIDEAEYGLVIPEPDTMKHKLIPKAS---GNSRKEEQNNADFCGDASRGSNDSIDK 121
           LSLEEIDEAEYGL IPEP+  K K   K S    N +K++Q+  D     S  S+D++ +
Sbjct: 63  LSLEEIDEAEYGLSIPEPEVDKRKTKKKKSEQNENVKKQQQDGVD-----SACSDDTVVE 122

Query: 122 EAVGHNVNTKTSKKGKKKEKKKKKKKR 143
             +  ++ +K  KK KKK K KKK  R
Sbjct: 123 AELDESLKSKEKKKKKKKTKNKKKDAR 144

[Close]

BLAST of MELO3C023055 vs. NCBI nr
Match: gi|951036489|ref|XP_014516628.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Vigna radiata var. radiata])

HSP 1 Score: 121.3 bits (303), Expect = 1.5e-24
Identity = 70/146 (47.95%), Postives = 94/146 (64.38%), Query Frame = 1


Query: 1   MAAESMQSMSSQKRRLKRKKTQKDPEFERLDSLPWNSSIPI---DDTLSAFIGSNDLEGG 60
           M A ++ + S +K + KR   + DPE ERL+SLPWNSS+P    DD  S FIG+N+LEGG
Sbjct: 1   MEAATVATSSLKKLKRKRALAKSDPELERLNSLPWNSSLPQNDDDDAFSLFIGTNELEGG 60

Query: 61  FLSLEEIDEAEYGLVIPEPDTMKHKLIPKAS---GNSRKEEQNNADFCGDASRGSNDSID 120
           FLSLEEIDEA+YGL IPEP+  K K   K S    + +K++Q+  D       GS+D ++
Sbjct: 61  FLSLEEIDEADYGLSIPEPEDSKRKAKKKKSIQNEDVKKQQQDGVD------GGSSDEVE 120

Query: 121 KEAVGHNVNTKTSKKGKKKEKKKKKK 141
            + +  +V  K  KK KKK+KK KKK
Sbjct: 121 AQ-LDESVKAKEKKKKKKKKKKTKKK 139

The following BLAST results are available for this feature:

BLAST of MELO3C023055 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RH13_ARATH	4.5e-18	36.77	DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana GN=RH13 PE=2 SV=3	[more]

BLAST of MELO3C023055 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNK8_CUCSA	3.3e-68	92.91	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G169750 PE=4 SV=1	[more]
I1KIF1_SOYBN	9.2e-26	48.30	Uncharacterized protein OS=Glycine max GN=GLYMA_07G074800 PE=4 SV=1	[more]
V7AMY8_PHAVU	1.0e-24	48.34	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G094600g PE=4 SV=1	[more]
A0A0S3SY31_PHAAN	6.6e-24	47.92	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.09G148000 PE=...	[more]
A0A0L9VR32_PHAAN	1.1e-23	47.92	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan11g037000 PE=3 SV=1	[more]

BLAST of MELO3C023055 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G16840.1	2.6e-19	36.77	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]

BLAST of MELO3C023055 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659121594\|ref\|XP_008460737.1\|	1.3e-70	95.04	PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Cucumis melo]	[more]
gi\|449458872\|ref\|XP_004147170.1\|	4.8e-68	92.91	PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Cucumis sativus]	[more]
gi\|700206432\|gb\|KGN61551.1\|	4.8e-68	92.91	hypothetical protein Csa_2G169750 [Cucumis sativus]	[more]
gi\|356520440\|ref\|XP_003528870.1\|	1.3e-25	48.30	PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine max]	[more]
gi\|951036489\|ref\|XP_014516628.1\|	1.5e-24	47.95	PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Vigna radiata var. radiata]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU47444	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C023055T1	MELO3C023055T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU47444	MU47444	transcribed_cluster

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C023055	Csa2G169750	Cucumber (Chinese Long) v2	cumeB131
MELO3C023055	Cla007628	Watermelon (97103) v1	mewmB430
MELO3C023055	ClCG06G007360	Watermelon (Charleston Gray)	mewcgB388
MELO3C023055	CSPI02G09890	Wild cucumber (PI 183967)	cpimeB141

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C023055	Cucumber (Gy14) v1	cgymeB434
MELO3C023055	Cucumber (Gy14) v1	cgymeB624
MELO3C023055	Cucurbita maxima (Rimu)	cmameB234
MELO3C023055	Cucurbita maxima (Rimu)	cmameB338
MELO3C023055	Cucurbita maxima (Rimu)	cmameB760
MELO3C023055	Cucurbita maxima (Rimu)	cmameB845
MELO3C023055	Cucurbita moschata (Rifu)	cmomeB221
MELO3C023055	Cucurbita moschata (Rifu)	cmomeB331
MELO3C023055	Cucurbita moschata (Rifu)	cmomeB752
MELO3C023055	Cucurbita moschata (Rifu)	cmomeB828
MELO3C023055	Wild cucumber (PI 183967)	cpimeB226
MELO3C023055	Cucumber (Chinese Long) v2	cumeB231
MELO3C023055	Watermelon (Charleston Gray)	mewcgB385
MELO3C023055	Watermelon (97103) v1	mewmB413
MELO3C023055	Cucurbita pepo (Zucchini)	cpemeB137
MELO3C023055	Cucurbita pepo (Zucchini)	cpemeB310
MELO3C023055	Cucurbita pepo (Zucchini)	cpemeB578
MELO3C023055	Cucurbita pepo (Zucchini)	cpemeB804
MELO3C023055	Bottle gourd (USVL1VR-Ls)	lsimeB025
MELO3C023055	Bottle gourd (USVL1VR-Ls)	lsimeB360
MELO3C023055	Cucumber (Gy14) v2	cgybmeB122
MELO3C023055	Cucumber (Gy14) v2	cgybmeB195
MELO3C023055	Silver-seed gourd	carmeB0233
MELO3C023055	Silver-seed gourd	carmeB0238
MELO3C023055	Silver-seed gourd	carmeB0939
MELO3C023055	Silver-seed gourd	carmeB1046
MELO3C023055	Cucumber (Chinese Long) v3	cucmeB143
MELO3C023055	Cucumber (Chinese Long) v3	cucmeB232
MELO3C023055	Watermelon (97103) v2	mewmbB384
MELO3C023055	Watermelon (97103) v2	mewmbB388
MELO3C023055	Wax gourd	mewgoB446
MELO3C023055	Wax gourd	mewgoB450
MELO3C023055	Melon (DHL92) v3.5.1	memeB147