MELO3C022984 (gene) Melon (DHL92) v3.5.1

NameMELO3C022984
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionSerine/threonine-protein phosphatase 7 long form like
Locationchr5 : 5526171 .. 5526914 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTGACTCAAAAATACATCCATTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCCGTGGGTCATCTGGTACATATTTAAATATTGTTTATATATTACTTAAATTATTTATTCAATTAAATATTTTTAATTTGTTTTTACAATTTACAGAGATCGAACAACGCAAAACTTCGTGATGTAGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATAGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCTCCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTGTAAGAAGTGCCTCATATGACACAAACACAGAGCCAAACTGGTTATGATAGTCTGATGACGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGTTTGGTACAGGATATTATGATGCAGGGGTCGATCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACATGGACGTGACTATGGGGAACATAACAAATATCTGTATCATGAAGCATCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACCACATATAGTTCAGAGTCGACGTCGACGACCAGCTCGAAATCGGCGACGTTCGGGTTGTGAACACATTGATTTTCTTTTATCAATCAAATAA

mRNA sequence

ATGGATGTGACTCAAAAATACATCCATTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCCGTGGGTCATCTGAGATCGAACAACGCAAAACTTCGTGATGTAGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATAGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCTCCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTTCTGATGACGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGTTTGGTACAGGATATTATGATGCAGGGGTCGATCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACATGGACGTGACTATGGGGAACATAACAAATATCTGTATCATGAAGCATCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACCACATATAGTTCAGAGTCGACGTCGACGACCAGCTCGAAATCGGCGACGTTCGGGTTGTGAACACATTGATTTTCTTTTATCAATCAAATAA

Coding sequence (CDS)

ATGGATGTGACTCAAAAATACATCCATTGGTATAATAATATTACGAGGCTCTACATCACTCGACCAGGAGCAGCCGTGGGTCATCTGAGATCGAACAACGCAAAACTTCGTGATGTAGCAGATGATCCACAACAAGTCCTTGATATATGTAATAATAATGAGAGGTACATAGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCCTCCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTACCATAATGTTCTGATGACGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGTTTGGTACAGGATATTATGATGCAGGGGTCGATCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACATGCATGGACATGGACGTGACTATGGGGAACATAACAAATATCTGTATCATGAAGCATCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACCACATATAGTTCAGAGTCGACGTCGACGACCAGCTCGAAATCGGCGACGTTCGGGTTGTGAACACATTGATTTTCTTTTATCAATCAAATAA

Protein sequence

MDVTQKYIHWYNNITRLYITRPGAAVGHLRSNNAKLRDVADDPQQVLDICNNNERYIEEIHNMYDLPIVPPPVHRGRVRVEEAELDEVYHNVLMTMMPTFGAGYCDSKFGTGYYDAGVDPSSSYMDVGPSTSYMHGHGRDYGEHNKYLYHEASADVSDRQEYQQEPENQEDREPHIVQSRRRRPARNRRRSGCEHIDFLLSIK*
BLAST of MELO3C022984 vs. TrEMBL
Match: A0A0A0KDI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014710 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 1.2e-12
Identity = 41/62 (66.13%), Postives = 45/62 (72.58%), Query Frame = 1

Query: 31 SNNAKLRDVADDPQQVLDICNNNERYIEEIHNMYDLPIVPPPVHRGRVRVEEAELDEVYH 90
          SNN  L DVAD  Q +LDI NNNERY+EEIH      IVPP V RG VRVEE ELDE+YH
Sbjct: 18 SNNISLHDVADVQQHILDISNNNERYMEEIHY-----IVPPSVRRGHVRVEEVELDEIYH 74

Query: 91 NV 93
          N+
Sbjct: 78 NL 74

BLAST of MELO3C022984 vs. NCBI nr
Match: gi|659069376|ref|XP_008449513.1| (PREDICTED: GATA zinc finger domain-containing protein 10-like [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 4.1e-51
Identity = 120/241 (49.79%), Postives = 154/241 (63.90%), Query Frame = 1

Query: 1   MDVTQKYIHWYNNITRLYITRPGAAVGHLRSNNAKLRDVADDPQQVLDICNNNERYIEEI 60
           MDVTQ+YIHWY NI++LYIT+PGAA+ HLRSNN +LR++ADDPQQVL+ICN+NE+Y+E I
Sbjct: 21  MDVTQEYIHWYKNISKLYITQPGAAMSHLRSNNTRLRNIADDPQQVLNICNDNEQYMENI 80

Query: 61  HNMYDLPIVPPPVHRGRVRVEEA-ELDEV-----------------YHNVL--MTMMPTF 120
           H MYD+PIVP PV R R  V+E+ +L+EV                  HN +  + MMPTF
Sbjct: 81  HYMYDVPIVPAPVQRRRPLVQESDQLEEVDQHGEEVPPMTQTQTQSEHNYVSPVMMMPTF 140

Query: 121 GAGYCD------SKFGTGYYDAGVDPSSS-----YMDVG--PSTSYMHGHGRDYGEHNKY 180
           G  Y D      S FG GYY++    SS+     Y D+G  PS+SYMHGHGR  GEHN+Y
Sbjct: 141 GMTYYDSGVGQSSDFGRGYYNSEAGQSSTDFGQQYYDLGSDPSSSYMHGHGRGRGEHNEY 200

Query: 181 LYHEASADV---SDRQEY------------QQEPENQEDREPHIVQSRRRRPARNRRRSG 194
           LY++  A V   SD Q+             QQ+ EN E+ +   VQ RRR+ A+NR+R G
Sbjct: 201 LYYKVPAAVPEQSDEQQQQENAAVPEQSDEQQQQENHEEIQQQRVQIRRRQLAKNRQRPG 260

BLAST of MELO3C022984 vs. NCBI nr
Match: gi|659126257|ref|XP_008463092.1| (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo])

HSP 1 Score: 94.4 bits (233), Expect = 2.5e-16
Identity = 41/54 (75.93%), Postives = 51/54 (94.44%), Query Frame = 1

Query: 1   MDVTQKYIHWYNNITRLYITRPGAAVGHLRSNNAKLRDVADDPQQVLDICNNNE 55
           MDVTQ+YI+WY NI++LYIT+PGAA+ HLRSNN +LR+VADDPQQVL+ICN+NE
Sbjct: 112 MDVTQEYINWYKNISKLYITQPGAAMSHLRSNNIRLRNVADDPQQVLNICNDNE 165

BLAST of MELO3C022984 vs. NCBI nr
Match: gi|700190647|gb|KGN45851.1| (hypothetical protein Csa_6G014710 [Cucumis sativus])

HSP 1 Score: 81.6 bits (200), Expect = 1.7e-12
Identity = 41/62 (66.13%), Postives = 45/62 (72.58%), Query Frame = 1

Query: 31 SNNAKLRDVADDPQQVLDICNNNERYIEEIHNMYDLPIVPPPVHRGRVRVEEAELDEVYH 90
          SNN  L DVAD  Q +LDI NNNERY+EEIH      IVPP V RG VRVEE ELDE+YH
Sbjct: 18 SNNISLHDVADVQQHILDISNNNERYMEEIHY-----IVPPSVRRGHVRVEEVELDEIYH 74

Query: 91 NV 93
          N+
Sbjct: 78 NL 74

BLAST of MELO3C022984 vs. NCBI nr
Match: gi|659123450|ref|XP_008461670.1| (PREDICTED: CASP-like protein RCOM_0464280 isoform X1 [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-09
Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 1

Query: 30  RSNNAKLRDVADDPQQVLDICNNNERYIEEIHNMYDLPIVPPPVHRGRVRVEEA-ELDEV 89
           RS N +L++VADDPQQVL+ICN+NE+Y+E IH MY++ IVP  V R R  V+E+ +L+EV
Sbjct: 162 RSKNIRLQNVADDPQQVLNICNDNEQYMENIHYMYNVLIVPALVQRRRPLVQESNQLEEV 221

Query: 90  YHNV 93
             +V
Sbjct: 222 VQHV 225

BLAST of MELO3C022984 vs. NCBI nr
Match: gi|659123452|ref|XP_008461671.1| (PREDICTED: CASP-like protein RCOM_0464280 isoform X2 [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-09
Identity = 36/64 (56.25%), Postives = 50/64 (78.12%), Query Frame = 1

Query: 30  RSNNAKLRDVADDPQQVLDICNNNERYIEEIHNMYDLPIVPPPVHRGRVRVEEA-ELDEV 89
           RS N +L++VADDPQQVL+ICN+NE+Y+E IH MY++ IVP  V R R  V+E+ +L+EV
Sbjct: 155 RSKNIRLQNVADDPQQVLNICNDNEQYMENIHYMYNVLIVPALVQRRRPLVQESNQLEEV 214

Query: 90  YHNV 93
             +V
Sbjct: 215 VQHV 218

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KDI9_CUCSA1.2e-1266.13Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014710 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659069376|ref|XP_008449513.1|4.1e-5149.79PREDICTED: GATA zinc finger domain-containing protein 10-like [Cucumis melo][more]
gi|659126257|ref|XP_008463092.1|2.5e-1675.93PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis mel... [more]
gi|700190647|gb|KGN45851.1|1.7e-1266.13hypothetical protein Csa_6G014710 [Cucumis sativus][more]
gi|659123450|ref|XP_008461670.1|1.8e-0956.25PREDICTED: CASP-like protein RCOM_0464280 isoform X1 [Cucumis melo][more]
gi|659123452|ref|XP_008461671.1|1.8e-0956.25PREDICTED: CASP-like protein RCOM_0464280 isoform X2 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022984T1MELO3C022984T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C022984Cucumber (Chinese Long) v2cumeB131
MELO3C022984Cucumber (Chinese Long) v2cumeB231
MELO3C022984Watermelon (Charleston Gray)mewcgB385
MELO3C022984Watermelon (Charleston Gray)mewcgB388
MELO3C022984Watermelon (Charleston Gray)mewcgB402
MELO3C022984Watermelon (97103) v1mewmB410
MELO3C022984Watermelon (97103) v1mewmB413
MELO3C022984Watermelon (97103) v1mewmB430
MELO3C022984Cucurbita pepo (Zucchini)cpemeB137
MELO3C022984Cucurbita pepo (Zucchini)cpemeB310
MELO3C022984Cucurbita pepo (Zucchini)cpemeB578
MELO3C022984Cucurbita pepo (Zucchini)cpemeB694
MELO3C022984Cucurbita pepo (Zucchini)cpemeB804
MELO3C022984Bottle gourd (USVL1VR-Ls)lsimeB025
MELO3C022984Bottle gourd (USVL1VR-Ls)lsimeB360
MELO3C022984Bottle gourd (USVL1VR-Ls)lsimeB364
MELO3C022984Cucumber (Gy14) v2cgybmeB122
MELO3C022984Cucumber (Gy14) v2cgybmeB195
MELO3C022984Silver-seed gourdcarmeB0233
MELO3C022984Silver-seed gourdcarmeB0238
MELO3C022984Silver-seed gourdcarmeB0778
MELO3C022984Silver-seed gourdcarmeB0939
MELO3C022984Silver-seed gourdcarmeB1046
MELO3C022984Cucumber (Chinese Long) v3cucmeB143
MELO3C022984Cucumber (Chinese Long) v3cucmeB232
MELO3C022984Watermelon (97103) v2mewmbB384
MELO3C022984Watermelon (97103) v2mewmbB388
MELO3C022984Watermelon (97103) v2mewmbB403
MELO3C022984Wax gourdmewgoB450
MELO3C022984Wax gourdmewgoB479
MELO3C022984Melon (DHL92) v3.5.1memeB147
MELO3C022984Cucumber (Gy14) v1cgymeB434
MELO3C022984Cucumber (Gy14) v1cgymeB624
MELO3C022984Cucurbita maxima (Rimu)cmameB234
MELO3C022984Cucurbita maxima (Rimu)cmameB338
MELO3C022984Cucurbita maxima (Rimu)cmameB576
MELO3C022984Cucurbita maxima (Rimu)cmameB760
MELO3C022984Cucurbita maxima (Rimu)cmameB845
MELO3C022984Cucurbita moschata (Rifu)cmomeB221
MELO3C022984Cucurbita moschata (Rifu)cmomeB331
MELO3C022984Cucurbita moschata (Rifu)cmomeB467
MELO3C022984Cucurbita moschata (Rifu)cmomeB752
MELO3C022984Cucurbita moschata (Rifu)cmomeB828
MELO3C022984Wild cucumber (PI 183967)cpimeB141
MELO3C022984Wild cucumber (PI 183967)cpimeB226