MELO3C022943 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C022943
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Sulfate adenylyltransferase subunit 2
Location	chr10 : 24957352 .. 24957612 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGCCTTGGTAGCTTCACAGTACCCTACTCGATAGGCGAAATGGACTTGGGTCGTGCTCTATCTGACCTTGGAGCGAGCATCAACTTGATGCCTCTTTCTATTTTCAAGAAATTAGAGATATGGGAGGTTCAACCAACTGACATGAGGCTCCAGTTTGTTGACAGATCCATTGCCAAGCCAGAGGGTAAGATTGAAGATGTTTTGGTGAAGGTGGATAAACTTTTGTTGCCCGTAGACTTCGTTATTCTGGGTTAA

mRNA sequence

ATGACAGGCCTTGGTAGCTTCACAGTACCCTACTCGATAGGCGAAATGGACTTGGGTCGTGCTCTATCTGACCTTGGAGCGAGCATCAACTTGATGCCTCTTTCTATTTTCAAGAAATTAGAGATATGGGAGGTTCAACCAACTGACATGAGGCTCCAGTTTGTTGACAGATCCATTGCCAAGCCAGAGGGTAAGATTGAAGATGTTTTGGTGAAGGTGGATAAACTTTTGTTGCCCGTAGACTTCGTTATTCTGGGTTAA

Coding sequence (CDS)

ATGACAGGCCTTGGTAGCTTCACAGTACCCTACTCGATAGGCGAAATGGACTTGGGTCGTGCTCTATCTGACCTTGGAGCGAGCATCAACTTGATGCCTCTTTCTATTTTCAAGAAATTAGAGATATGGGAGGTTCAACCAACTGACATGAGGCTCCAGTTTGTTGACAGATCCATTGCCAAGCCAGAGGGTAAGATTGAAGATGTTTTGGTGAAGGTGGATAAACTTTTGTTGCCCGTAGACTTCGTTATTCTGGGTTAA

Protein sequence

MTGLGSFTVPYSIGEMDLGRALSDLGASINLMPLSIFKKLEIWEVQPTDMRLQFVDRSIAKPEGKIEDVLVKVDKLLLPVDFVILG*

Homology

[Close]

BLAST of MELO3C022943 vs. TrEMBL
Match: A0A0S3RK86_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G063900 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.8e-21
Identity = 53/81 (65.43%), Postives = 65/81 (80.25%), Query Frame = 1


Query: 5   GSFTVPYSIGEMDLGRALSDLGASINLMPLSIFKKLEIWEVQPTDMRLQFVDRSIAKPEG 64
           GSFT+P +IGE+ +G AL DLGASINLMPLS+FKK+   E++PT M LQ  DRSI  P+G
Sbjct: 109 GSFTIPCTIGELAIGNALIDLGASINLMPLSMFKKIGELELKPTRMTLQLADRSIKYPQG 168

Query: 65  KIEDVLVKVDKLLLPVDFVIL 86
            +EDVLVKVDK L PVDFV++
Sbjct: 169 VVEDVLVKVDKFLFPVDFVVM 189

[Close]

BLAST of MELO3C022943 vs. TrEMBL
Match: A0A0S3QWS7_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G023800 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-19
Identity = 51/81 (62.96%), Postives = 62/81 (76.54%), Query Frame = 1


Query: 5   GSFTVPYSIGEMDLGRALSDLGASINLMPLSIFKKLEIWEVQPTDMRLQFVDRSIAKPEG 64
           GSF +P  IG + +G+AL DLGASINLMPLSIFK+L I EV+PT + LQ  DRS+  P G
Sbjct: 131 GSFVIPCEIGNITVGKALCDLGASINLMPLSIFKRLGIGEVKPTMITLQLADRSMTYPYG 190

Query: 65  KIEDVLVKVDKLLLPVDFVIL 86
            +EDVLVKVDK + P DFV+L
Sbjct: 191 IVEDVLVKVDKFIFPTDFVVL 211

[Close]

BLAST of MELO3C022943 vs. TrEMBL
Match: A0A0S3S1V0_PHAAN (Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis GN=Vigan.05G014200 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.6e-19
Identity = 51/81 (62.96%), Postives = 63/81 (77.78%), Query Frame = 1


Query: 5  GSFTVPYSIGEMDLGRALSDLGASINLMPLSIFKKLEIWEVQPTDMRLQFVDRSIAKPEG 64
          GSFT+P +IG  D+GRAL DLGASINL+PLS+ KK+   EV+PT M LQ  DRSI  P G
Sbjct: 13 GSFTIPCTIGNHDIGRALVDLGASINLIPLSMLKKIGGLEVKPTRMMLQLADRSIKYPYG 72

Query: 65 KIEDVLVKVDKLLLPVDFVIL 86
           +EDV+VK+DKL  PVDFV++
Sbjct: 73 VVEDVVVKIDKLQFPVDFVVM 93

[Close]

BLAST of MELO3C022943 vs. TrEMBL
Match: A0A151RR60_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_033488 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-19
Identity = 50/81 (61.73%), Postives = 63/81 (77.78%), Query Frame = 1


Query: 5   GSFTVPYSIGEMDLGRALSDLGASINLMPLSIFKKLEIWEVQPTDMRLQFVDRSIAKPEG 64
           GSFT+P SIG + +G+AL DLGASINLMPLS+ KK+   EV+PT M LQ  DRSI  P G
Sbjct: 210 GSFTLPVSIGNLSVGKALLDLGASINLMPLSMLKKIGEVEVRPTRMTLQLADRSIKIPHG 269

Query: 65  KIEDVLVKVDKLLLPVDFVIL 86
            +ED++VKVDK + PVDFV++
Sbjct: 270 IVEDMIVKVDKFMFPVDFVVM 290

[Close]

BLAST of MELO3C022943 vs. TrEMBL
Match: A0A151QYK1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_043639 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-19
Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 1


Query: 5   GSFTVPYSIGEMDLGRALSDLGASINLMPLSIFKKLEIWEVQPTDMRLQFVDRSIAKPEG 64
           GSFT+P SIG + +G+AL DLGAS+NLMPLS+ KK+   EV+PT M LQ  DRSI  P G
Sbjct: 228 GSFTLPVSIGNLSVGKALLDLGASVNLMPLSMLKKIGEVEVRPTRMTLQLADRSIKLPHG 287

Query: 65  KIEDVLVKVDKLLLPVDFVIL 86
            +ED++VKVDK + PVDFV++
Sbjct: 288 IVEDMIVKVDKFMFPVDFVVM 308

[Close]

BLAST of MELO3C022943 vs. NCBI nr
Match: gi|659130345|ref|XP_008465121.1| (PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo])

HSP 1 Score: 124.4 bits (311), Expect = 9.7e-26
Identity = 66/85 (77.65%), Postives = 68/85 (80.00%), Query Frame = 1


Query: 1   MTGLGSFTVPYSIGEMDLGRALSDLGASINLMPLSIFKKLEIWEVQPTDMRLQFVDRSIA 60
           MT   SFTVP SI  MDLG  L DLGASINLMPLSIFKKLEI EVQP  MRLQFVDRSIA
Sbjct: 31  MTDCRSFTVPCSINNMDLGHVLCDLGASINLMPLSIFKKLEIEEVQPMHMRLQFVDRSIA 90

Query: 61  KPEGKIEDVLVKVDKLLLPVDFVIL 86
           K EGKIED+LVKVDK L   DF+IL
Sbjct: 91  KHEGKIEDILVKVDKFLFHADFIIL 115

[Close]

BLAST of MELO3C022943 vs. NCBI nr
Match: gi|659093662|ref|XP_008447648.1| (PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo])

HSP 1 Score: 115.9 bits (289), Expect = 3.5e-23
Identity = 62/85 (72.94%), Postives = 65/85 (76.47%), Query Frame = 1


Query: 1   MTGLGSFTVPYSIGEMDLGRALSDLGASINLMPLSIFKKLEIWEVQPTDMRLQFVDRSIA 60
           MT  GSF VP SI  MDLG  L DLGASINLMPLSIFKKL+I EVQPT MR Q  DRSI 
Sbjct: 42  MTYPGSFKVPCSIDGMDLGHVLCDLGASINLMPLSIFKKLKIKEVQPTHMRFQLADRSIT 101

Query: 61  KPEGKIEDVLVKVDKLLLPVDFVIL 86
            P+GKIEDVLVKVDK L   DF+IL
Sbjct: 102 NPKGKIEDVLVKVDKFLFFADFIIL 126

[Close]

BLAST of MELO3C022943 vs. NCBI nr
Match: gi|659111569|ref|XP_008455795.1| (PREDICTED: uncharacterized protein LOC103495890 [Cucumis melo])

HSP 1 Score: 113.2 bits (282), Expect = 2.2e-22
Identity = 59/85 (69.41%), Postives = 66/85 (77.65%), Query Frame = 1


Query: 1   MTGLGSFTVPYSIGEMDLGRALSDLGASINLMPLSIFKKLEIWEVQPTDMRLQFVDRSIA 60
           MT   SFTV  SI +MDLG  L +LGASINLM LSIFKKL +WE QPT M LQFVDRSI 
Sbjct: 51  MTYPRSFTVSCSIDDMDLGHTLCNLGASINLMHLSIFKKLGMWEAQPTKMVLQFVDRSIT 110

Query: 61  KPEGKIEDVLVKVDKLLLPVDFVIL 86
           +PEGKI+DVL+KVDK L   DF+IL
Sbjct: 111 RPEGKIDDVLIKVDKFLFLADFIIL 135

[Close]

BLAST of MELO3C022943 vs. NCBI nr
Match: gi|985471186|ref|XP_015381177.1| (PREDICTED: uncharacterized protein LOC107174641 [Citrus sinensis])

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-21
Identity = 54/85 (63.53%), Postives = 66/85 (77.65%), Query Frame = 1


Query: 1   MTGLGSFTVPYSIGEMDLGRALSDLGASINLMPLSIFKKLEIWEVQPTDMRLQFVDRSIA 60
           M  LGSFT+PYS+G    G+ L DLGASINLMPLS+FK+L + E +PT + LQ  D+S A
Sbjct: 272 MKDLGSFTIPYSMGTKYSGKTLCDLGASINLMPLSVFKQLGVGERRPTTVTLQLADKSHA 331

Query: 61  KPEGKIEDVLVKVDKLLLPVDFVIL 86
            PEGKIEDVLVKVDK + PVDF++L
Sbjct: 332 YPEGKIEDVLVKVDKFIFPVDFIVL 356

[Close]

BLAST of MELO3C022943 vs. NCBI nr
Match: gi|985467958|ref|XP_015389858.1| (PREDICTED: uncharacterized protein LOC107178784 [Citrus sinensis])

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-21
Identity = 55/82 (67.07%), Postives = 65/82 (79.27%), Query Frame = 1


Query: 4   LGSFTVPYSIGEMDLGRALSDLGASINLMPLSIFKKLEIWEVQPTDMRLQFVDRSIAKPE 63
           LGSFT+P SIG    GRAL DLGASINLMPLS+FK+L + + +PT + LQ  DRS A PE
Sbjct: 55  LGSFTIPCSIGTRYAGRALYDLGASINLMPLSVFKQLGVGDCRPTTVTLQLADRSHAYPE 114

Query: 64  GKIEDVLVKVDKLLLPVDFVIL 86
           GKIEDVLVKVDK + PVDF++L
Sbjct: 115 GKIEDVLVKVDKFIFPVDFIVL 136

The following BLAST results are available for this feature:

BLAST of MELO3C022943 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0S3RK86_PHAAN	3.8e-21	65.43	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.03G063900 PE=...	[more]
A0A0S3QWS7_PHAAN	1.2e-19	62.96	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G023800 PE=...	[more]
A0A0S3S1V0_PHAAN	1.6e-19	62.96	Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis GN=Vigan.05...	[more]
A0A151RR60_CAJCA	2.1e-19	61.73	Uncharacterized protein OS=Cajanus cajan GN=KK1_033488 PE=4 SV=1	[more]
A0A151QYK1_CAJCA	2.1e-19	60.49	Uncharacterized protein OS=Cajanus cajan GN=KK1_043639 PE=4 SV=1	[more]

BLAST of MELO3C022943 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130345\|ref\|XP_008465121.1\|	9.7e-26	77.65	PREDICTED: uncharacterized protein LOC103502805 [Cucumis melo]	[more]
gi\|659093662\|ref\|XP_008447648.1\|	3.5e-23	72.94	PREDICTED: uncharacterized protein LOC103490055 [Cucumis melo]	[more]
gi\|659111569\|ref\|XP_008455795.1\|	2.2e-22	69.41	PREDICTED: uncharacterized protein LOC103495890 [Cucumis melo]	[more]
gi\|985471186\|ref\|XP_015381177.1\|	1.5e-21	63.53	PREDICTED: uncharacterized protein LOC107174641 [Citrus sinensis]	[more]
gi\|985467958\|ref\|XP_015389858.1\|	1.5e-21	67.07	PREDICTED: uncharacterized protein LOC107178784 [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022943T1	MELO3C022943T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33067	FAMILY NOT NAMED	coord: 5..85 score: 1.7
None	No IPR available	PANTHER	PTHR33067:SF2	SUBFAMILY NOT NAMED	coord: 5..85 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C022943	Wax gourd	mewgoB088
MELO3C022943	Cucumber (Gy14) v1	cgymeB330
MELO3C022943	Cucurbita maxima (Rimu)	cmameB646
MELO3C022943	Cucurbita moschata (Rifu)	cmomeB639
MELO3C022943	Wild cucumber (PI 183967)	cpimeB376
MELO3C022943	Cucumber (Chinese Long) v2	cumeB381
MELO3C022943	Watermelon (Charleston Gray)	mewcgB046
MELO3C022943	Watermelon (Charleston Gray)	mewcgB050
MELO3C022943	Watermelon (97103) v1	mewmB073
MELO3C022943	Watermelon (97103) v1	mewmB080
MELO3C022943	Cucurbita pepo (Zucchini)	cpemeB371
MELO3C022943	Cucumber (Gy14) v2	cgybmeB325
MELO3C022943	Bottle gourd (USVL1VR-Ls)	lsimeB082
MELO3C022943	Cucumber (Chinese Long) v3	cucmeB388
MELO3C022943	Watermelon (97103) v2	mewmbB050
MELO3C022943	Watermelon (97103) v2	mewmbB052