MELO3C022918 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C022918
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionBrassinosteroid receptor
Locationchr10 : 24280376 .. 24280564 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGCTACTCTCGAGGAGGAGGTAAAAGAGCATAAAGATGAGAGCGATATTAGTAAAAGTGATCGTCATTGGAAGAGACCTTTAAAGAAAGCGAAGGTATCAGTTGATGATCCCGACGGAAGAGGTTCAAGTGCTTTGGGAGTCCCTGATGTTCCACCACTAGTTTGCACAAAAATGACTTATTAA

mRNA sequence

ATGGATGCTACTCTCGAGGAGGAGGTAAAAGAGCATAAAGATGAGAGCGATATTAGTAAAAGTGATCGTCATTGGAAGAGACCTTTAAAGAAAGCGAAGGTATCAGTTGATGATCCCGACGGAAGAGGTTCAAGTGCTTTGGGAGTCCCTGATGTTCCACCACTAGTTTGCACAAAAATGACTTATTAA

Coding sequence (CDS)

ATGGATGCTACTCTCGAGGAGGAGGTAAAAGAGCATAAAGATGAGAGCGATATTAGTAAAAGTGATCGTCATTGGAAGAGACCTTTAAAGAAAGCGAAGGTATCAGTTGATGATCCCGACGGAAGAGGTTCAAGTGCTTTGGGAGTCCCTGATGTTCCACCACTAGTTTGCACAAAAATGACTTATTAA

Protein sequence

MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPDGRGSSALGVPDVPPLVCTKMTY*
Homology
[Close]
BLAST of MELO3C022918 vs. TrEMBL
Match: E5GCB9_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.9e-10
Identity = 34/40 (85.00%), Postives = 34/40 (85.00%), Query Frame = 1 

Query: 1   MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPD 41
           M   LEEEVKEHKDESD SKSDRHWKRPLKKAKVS D PD
Sbjct: 344 MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPD 383

[Close]
BLAST of MELO3C022918 vs. TrEMBL
Match: A0A0A0KQU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264300 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.5e-06
Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 1 

Query: 1  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDP 40
          M  TLE++V EHKDESD +KSDRHWKRPLKKAK     P
Sbjct: 1  MAPTLEKDVAEHKDESDNNKSDRHWKRPLKKAKTPAAKP 39

[Close]
BLAST of MELO3C022918 vs. NCBI nr
Match: gi|307136292|gb|ADN34118.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 71.2 bits (173), Expect = 7.1e-10
Identity = 34/40 (85.00%), Postives = 34/40 (85.00%), Query Frame = 1 

Query: 1   MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDPD 41
           M   LEEEVKEHKDESD SKSDRHWKRPLKKAKVS D PD
Sbjct: 344 MAPNLEEEVKEHKDESDSSKSDRHWKRPLKKAKVSGDHPD 383

[Close]
BLAST of MELO3C022918 vs. NCBI nr
Match: gi|700195620|gb|KGN50797.1| (hypothetical protein Csa_5G264300 [Cucumis sativus])

HSP 1 Score: 58.9 bits (141), Expect = 3.6e-06
Identity = 27/39 (69.23%), Postives = 30/39 (76.92%), Query Frame = 1 

Query: 1  MDATLEEEVKEHKDESDISKSDRHWKRPLKKAKVSVDDP 40
          M  TLE++V EHKDESD +KSDRHWKRPLKKAK     P
Sbjct: 1  MAPTLEKDVAEHKDESDNNKSDRHWKRPLKKAKTPAAKP 39

The following BLAST results are available for this feature:
BLAST of MELO3C022918 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GCB9_CUCME4.9e-1085.00Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KQU9_CUCSA2.5e-0669.23Uncharacterized protein OS=Cucumis sativus GN=Csa_5G264300 PE=4 SV=1[more]
BLAST of MELO3C022918 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|307136292|gb|ADN34118.1|7.1e-1085.00hypothetical protein [Cucumis melo subsp. melo][more]
gi|700195620|gb|KGN50797.1|3.6e-0669.23hypothetical protein Csa_5G264300 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022918T1MELO3C022918T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C022918Silver-seed gourdcarmeB0281
MELO3C022918Cucumber (Chinese Long) v3cucmeB384
MELO3C022918Watermelon (97103) v2mewmbB050
MELO3C022918Wax gourdmewgoB065
MELO3C022918Wax gourdmewgoB088
MELO3C022918Cucumber (Gy14) v1cgymeB339
MELO3C022918Cucurbita maxima (Rimu)cmameB646
MELO3C022918Cucurbita moschata (Rifu)cmomeB639
MELO3C022918Wild cucumber (PI 183967)cpimeB374
MELO3C022918Cucumber (Chinese Long) v2cumeB380
MELO3C022918Watermelon (Charleston Gray)mewcgB046
MELO3C022918Watermelon (97103) v1mewmB080
MELO3C022918Cucurbita pepo (Zucchini)cpemeB371
MELO3C022918Bottle gourd (USVL1VR-Ls)lsimeB082
MELO3C022918Cucumber (Gy14) v2cgybmeB323