MELO3C022911 (gene) Melon (DHL92) v3.5.1

NameMELO3C022911
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionXanthine dehydrogenase molybdenum-binding subunit
Locationchr10 : 24168879 .. 24169202 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGTAAATAATGGCTCCTCTCTCTCCCAAGCCACAATAGATCAAGAAAAAGAAAGAAACCCTGATCCAAATGGAAAGAAGATAGTAACCAGCTCTAAGAAGCAATCTGAAAATCTCTGTCAAAGGCCCAATTTGAGCAAGTGTTTTGGCTGTGGTCAAATTGACCACCACTCTAATTCTTGGCCTAAGAGAAAAATATTATCAATTTTAGATGACGATGGAGATTCCAAGAATGAACAAGAAGAAGGTTTTGATCAAGAAGAAGAATCCCTTGAACTGGATGATGGGAGAGGCTCTCTTGTGTACTCCAAAGGGTTTTGA

mRNA sequence

ATGGCTGTAAATAATGGCTCCTCTCTCTCCCAAGCCACAATAGATCAAGAAAAAGAAAGAAACCCTGATCCAAATGGAAAGAAGATAGTAACCAGCTCTAAGAAGCAATCTGAAAATCTCTGTCAAAGGCCCAATTTGAGCAAGTGTTTTGGCTGTGGTCAAATTGACCACCACTCTAATTCTTGGCCTAAGAGAAAAATATTATCAATTTTAGATGACGATGGAGATTCCAAGAATGAACAAGAAGAAGGTTTTGATCAAGAAGAAGAATCCCTTGAACTGGATGATGGGAGAGGCTCTCTTGTGTACTCCAAAGGGTTTTGA

Coding sequence (CDS)

ATGGCTGTAAATAATGGCTCCTCTCTCTCCCAAGCCACAATAGATCAAGAAAAAGAAAGAAACCCTGATCCAAATGGAAAGAAGATAGTAACCAGCTCTAAGAAGCAATCTGAAAATCTCTGTCAAAGGCCCAATTTGAGCAAGTGTTTTGGCTGTGGTCAAATTGACCACCACTCTAATTCTTGGCCTAAGAGAAAAATATTATCAATTTTAGATGACGATGGAGATTCCAAGAATGAACAAGAAGAAGGTTTTGATCAAGAAGAAGAATCCCTTGAACTGGATGATGGGAGAGGCTCTCTTGTGTACTCCAAAGGGTTTTGA

Protein sequence

MAVNNGSSLSQATIDQEKERNPDPNGKKIVTSSKKQSENLCQRPNLSKCFGCGQIDHHSNSWPKRKILSILDDDGDSKNEQEEGFDQEEESLELDDGRGSLVYSKGF*
BLAST of MELO3C022911 vs. NCBI nr
Match: gi|659125686|ref|XP_008462813.1| (PREDICTED: uncharacterized protein LOC103501094 [Cucumis melo])

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-18
Identity = 49/88 (55.68%), Postives = 62/88 (70.45%), Query Frame = 1

Query: 10 SQATIDQEKERNPDPNGKKIVTSSKKQSENLCQRPNLSKCFGCGQIDHHSNSWPKRKILS 69
          S  T ++EK++   PNGKK     KKQ+EN+ QRPNLSKCF  GQ DH SN +PKRK ++
Sbjct: 5  SSLTKEEEKDKTSAPNGKKTEAIPKKQTENVYQRPNLSKCFHFGQADHFSNFFPKRKTIA 64

Query: 70 ILDDDGDSKNEQEEGFDQEEESLELDDG 98
          IL++D D   EQE  FDQ+EE LE D+G
Sbjct: 65 ILEEDEDVAEEQEGNFDQDEEILEPDEG 92

BLAST of MELO3C022911 vs. NCBI nr
Match: gi|778697731|ref|XP_011654385.1| (PREDICTED: uncharacterized protein LOC105435376 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 9.9e-12
Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = 1

Query: 15 DQEKERNPDPNGKKIVTSSKKQSENLCQRPNLSKCFGCGQIDHHSNSWPKRKILSILDDD 74
          DQEK++  + NGKK       Q+EN  QR NLSKCF  GQ  H SN++PKRK ++I+++D
Sbjct: 7  DQEKDKTNETNGKK-------QAENAYQRSNLSKCFHSGQTGHLSNAFPKRKTVAIIEED 66

Query: 75 GDSKNEQEEGFDQEEESLELDDG 98
           D   EQEE   Q EE LE DDG
Sbjct: 67 EDYVEEQEEDLSQ-EEVLEPDDG 81

BLAST of MELO3C022911 vs. NCBI nr
Match: gi|659094543|ref|XP_008448119.1| (PREDICTED: uncharacterized protein LOC103490407 [Cucumis melo])

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-07
Identity = 38/106 (35.85%), Postives = 61/106 (57.55%), Query Frame = 1

Query: 5   NGSSLSQATIDQEKERNPDP---NG-KKIVTSSKKQSENLCQRPNLSKCFGCGQIDHHSN 64
           N +S    T  Q K +  D    NG K+  T++  +S+N    P+L KCF CGQ  H SN
Sbjct: 50  NKASDQSFTSSQGKGKEVDTQELNGEKRKETANGSKSQNNYTHPSLGKCFRCGQTGHLSN 109

Query: 65  SWPKRKILSILDDDGDSKNEQEEGFDQEEESLELDDG-RGSLVYSK 106
           + P+RK +++ D++ DS +E  +  ++E E +E DDG R S ++ +
Sbjct: 110 TCPQRKTIALADEEEDSMSENNKEAEEEVELIEADDGDRVSCIFQR 155

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659125686|ref|XP_008462813.1|1.1e-1855.68PREDICTED: uncharacterized protein LOC103501094 [Cucumis melo][more]
gi|778697731|ref|XP_011654385.1|9.9e-1251.81PREDICTED: uncharacterized protein LOC105435376 [Cucumis sativus][more]
gi|659094543|ref|XP_008448119.1|1.5e-0735.85PREDICTED: uncharacterized protein LOC103490407 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022911T1MELO3C022911T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None