MELO3C022818 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C022818
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Glutathione-regulated potassium-efflux system ancillary protein KefF
Location	chr9 : 12374813 .. 12375171 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTGTGAAGATTGATGTGGTTAGTAAATTGCCACTGCCTTCTGATTTAAAACCATTACGAAGCTTTTTGAGACATGTTGGGTTCTATCGCAGATTCATCAAAGGATTTTTCCAAATCGCCAAAGCACTGAGAAACGTATTGAGCGTAAATCAACCTACATCTTTGATGAGAAGTGCCACCAGGCATTCCAAACATTAAAAGACATGTTGACCCCAACGTCTATCCTCATCACTCCTGATTGGTTGCAACCATTTGAATTGATGTGCGACACAAGTGATGTGACGGTAGGAGCTATATTAGGTCAAAAGAAGGATAAAGTGATCCACCCGATATACTACGCGGGATACAAATGA

mRNA sequence

ATGGATCTTGTGAAGATTGATGTGATTCATCAAAGGATTTTTCCAAATCGCCAAAGCACTGAGAAACGTATTGAGCGTAAATCAACCTACATCTTTGATGAGAAGTGCCACCAGGCATTCCAAACATTAAAAGACATGTTGACCCCAACGTCTATCCTCATCACTCCTGATTGGTTGCAACCATTTGAATTGATGTGCGACACAAGTGATGTGACGGTAGGAGCTATATTAGGTCAAAAGAAGGATAAAGTGATCCACCCGATATACTACGCGGGATACAAATGA

Coding sequence (CDS)

ATGGATCTTGTGAAGATTGATGTGATTCATCAAAGGATTTTTCCAAATCGCCAAAGCACTGAGAAACGTATTGAGCGTAAATCAACCTACATCTTTGATGAGAAGTGCCACCAGGCATTCCAAACATTAAAAGACATGTTGACCCCAACGTCTATCCTCATCACTCCTGATTGGTTGCAACCATTTGAATTGATGTGCGACACAAGTGATGTGACGGTAGGAGCTATATTAGGTCAAAAGAAGGATAAAGTGATCCACCCGATATACTACGCGGGATACAAATGA

Protein sequence

MDLVKIDVIHQRIFPNRQSTEKRIERKSTYIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKKDKVIHPIYYAGYK*

Homology

[Close]

BLAST of MELO3C022818 vs. TrEMBL
Match: A0A151RMX9_CAJCA (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan GN=KK1_034672 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.0e-14
Identity = 35/68 (51.47%), Postives = 52/68 (76.47%), Query Frame = 1


Query: 24  IERKSTYIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKKDK 83
           + ++  ++FDE+C +AF TLK+ LT T +++ PDW + FELMCD +D  VGA+LGQ+++K
Sbjct: 546 LNKEQPFLFDEECMKAFLTLKNKLTTTPVIVAPDWSESFELMCDANDYAVGAVLGQQRNK 605

Query: 84  VIHPIYYA 92
           V H IYYA
Sbjct: 606 VFHSIYYA 613

[Close]

BLAST of MELO3C022818 vs. TrEMBL
Match: A0A151SCK3_CAJCA (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan GN=KK1_025496 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-14
Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 1


Query: 24  IERKSTYIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKKDK 83
           + +  +++FDE+C +AF TLK+ LT   +++ PDW   FELMCD SD  VGA+LGQ+++K
Sbjct: 137 LNKDQSFLFDEECMKAFLTLKNKLTTAPVIVAPDWSDDFELMCDASDYAVGAVLGQRRNK 196

Query: 84  VIHPIYYA 92
           V H IYYA
Sbjct: 197 VFHSIYYA 204

[Close]

BLAST of MELO3C022818 vs. TrEMBL
Match: A0A151QNZ0_CAJCA (Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment) OS=Cajanus cajan GN=KK1_047401 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 2.2e-14
Identity = 35/68 (51.47%), Postives = 50/68 (73.53%), Query Frame = 1


Query: 24  IERKSTYIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKKDK 83
           + +   ++FDE+C +AF TLK+ LT   +++ PDW + FELMCD SD  VGA+LGQ+++K
Sbjct: 486 LNKDQPFLFDEECMKAFLTLKNKLTTAPVIVAPDWSESFELMCDASDYAVGAVLGQRRNK 545

Query: 84  VIHPIYYA 92
           V H IYYA
Sbjct: 546 VFHSIYYA 553

[Close]

BLAST of MELO3C022818 vs. TrEMBL
Match: A0A151SIL7_CAJCA (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan GN=KK1_000798 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.5e-14
Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = 1


Query: 24  IERKSTYIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKKDK 83
           + +   ++F+E+C +AF TLK+ LT   +++ PDW + FELMCD SD  VGA+LGQ+++K
Sbjct: 137 LNKDQPFLFEEECMKAFLTLKNKLTTAPVIVAPDWSENFELMCDASDYAVGAVLGQRRNK 196

Query: 84  VIHPIYYA 92
           V H IYYA
Sbjct: 197 VFHSIYYA 204

[Close]

BLAST of MELO3C022818 vs. TrEMBL
Match: A0A151RAN6_CAJCA (Retrovirus-related Pol polyprotein from transposon 412 family OS=Cajanus cajan GN=KK1_039243 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 8.5e-14
Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = 1


Query: 24  IERKSTYIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKKDK 83
           + +   ++FDE+C +AF TLK+ LT   +++ PDW + FELMCD S+  VGA+LGQ+++K
Sbjct: 122 LNKDQPFLFDEECMKAFLTLKNKLTTAPVIVAPDWSESFELMCDASNYAVGAVLGQRRNK 181

Query: 84  VIHPIYYA 92
           V H IYYA
Sbjct: 182 VFHSIYYA 189

[Close]

BLAST of MELO3C022818 vs. NCBI nr
Match: gi|971541668|ref|XP_015162004.1| (PREDICTED: uncharacterized protein LOC107059719 [Solanum tuberosum])

HSP 1 Score: 91.3 bits (225), Expect = 1.0e-15
Identity = 40/62 (64.52%), Postives = 48/62 (77.42%), Query Frame = 1


Query: 30 YIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKKDKVIHPIY 89
          ++FDEKC QAF+ LK  L    ILI P+W  PFELMCDTSD+ VGA+LGQ+KDK+ H IY
Sbjct: 3  FVFDEKCWQAFEVLKKKLIEAPILIAPNWELPFELMCDTSDIEVGAVLGQRKDKMFHSIY 62

Query: 90 YA 92
          YA
Sbjct: 63 YA 64

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BLAST of MELO3C022818 vs. NCBI nr
Match: gi|955314103|ref|XP_014629757.1| (PREDICTED: uncharacterized protein LOC106798275 [Glycine max])

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-15
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1


Query: 24   IERKSTYIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKKDK 83
            + +   + FDE+C  AFQTLKD LT   ++ITPDW + FELMCD SD  +GA+LGQ+ DK
Sbjct: 1206 LNKDVAFKFDEECSAAFQTLKDKLTTAPVMITPDWSKDFELMCDASDYAIGAVLGQRHDK 1265

Query: 84   VIHPIYYA 92
            V H IYYA
Sbjct: 1266 VFHAIYYA 1273

[Close]

BLAST of MELO3C022818 vs. NCBI nr
Match: gi|698522389|ref|XP_009758014.1| (PREDICTED: uncharacterized protein LOC104210751 [Nicotiana sylvestris])

HSP 1 Score: 90.5 bits (223), Expect = 1.7e-15
Identity = 37/69 (53.62%), Postives = 53/69 (76.81%), Query Frame = 1


Query: 22  KRIERKSTYIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKK 81
           K +E+ + ++FDE C  AF+ LK  LT   I++TPDW  PFELMCD S V++GA+LGQ++
Sbjct: 80  KLLEKDAKFVFDENCLIAFEELKQRLTTAPIIVTPDWSLPFELMCDASGVSIGAMLGQRQ 139

Query: 82  DKVIHPIYY 91
           +KV+HP+YY
Sbjct: 140 NKVLHPVYY 148

[Close]

BLAST of MELO3C022818 vs. NCBI nr
Match: gi|698488340|ref|XP_009790776.1| (PREDICTED: uncharacterized protein LOC104238179 [Nicotiana sylvestris])

HSP 1 Score: 90.1 bits (222), Expect = 2.2e-15
Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = 1


Query: 24  IERKSTYIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKKDK 83
           +E+   + FD+ C +AF+ LK  L    I+I PDW QPFELMCD SD+TVGA+LGQ+++K
Sbjct: 682 LEKDVAFKFDDACLKAFEELKGRLVTAPIIIAPDWEQPFELMCDASDLTVGAVLGQRRNK 741

Query: 84  VIHPIYYA 92
           + HPIYYA
Sbjct: 742 IFHPIYYA 749

[Close]

BLAST of MELO3C022818 vs. NCBI nr
Match: gi|697182464|ref|XP_009600236.1| (PREDICTED: uncharacterized protein LOC104095751, partial [Nicotiana tomentosiformis])

HSP 1 Score: 89.7 bits (221), Expect = 2.9e-15
Identity = 39/70 (55.71%), Postives = 48/70 (68.57%), Query Frame = 1


Query: 22  KRIERKSTYIFDEKCHQAFQTLKDMLTPTSILITPDWLQPFELMCDTSDVTVGAILGQKK 81
           K +E    ++F   C  AF+ LK  L  T I++ PDW QPFE+MCD SD  VGA+LGQ K
Sbjct: 584 KLLENDHPFVFSADCRVAFEELKKRLVTTPIIVAPDWEQPFEMMCDASDYVVGAVLGQLK 643

Query: 82  DKVIHPIYYA 92
           DKV+HPIYYA
Sbjct: 644 DKVMHPIYYA 653

The following BLAST results are available for this feature:

BLAST of MELO3C022818 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A151RMX9_CAJCA	1.0e-14	51.47	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan GN=KK1_...	[more]
A0A151SCK3_CAJCA	2.2e-14	51.47	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan GN=KK1_...	[more]
A0A151QNZ0_CAJCA	2.2e-14	51.47	Retrovirus-related Pol polyprotein from transposon 17.6 (Fragment) OS=Cajanus ca...	[more]
A0A151SIL7_CAJCA	8.5e-14	50.00	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Cajanus cajan GN=KK1_...	[more]
A0A151RAN6_CAJCA	8.5e-14	50.00	Retrovirus-related Pol polyprotein from transposon 412 family OS=Cajanus cajan G...	[more]

BLAST of MELO3C022818 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|971541668\|ref\|XP_015162004.1\|	1.0e-15	64.52	PREDICTED: uncharacterized protein LOC107059719 [Solanum tuberosum]	[more]
gi\|955314103\|ref\|XP_014629757.1\|	1.7e-15	57.35	PREDICTED: uncharacterized protein LOC106798275 [Glycine max]	[more]
gi\|698522389\|ref\|XP_009758014.1\|	1.7e-15	53.62	PREDICTED: uncharacterized protein LOC104210751 [Nicotiana sylvestris]	[more]
gi\|698488340\|ref\|XP_009790776.1\|	2.2e-15	55.88	PREDICTED: uncharacterized protein LOC104238179 [Nicotiana sylvestris]	[more]
gi\|697182464\|ref\|XP_009600236.1\|	2.9e-15	55.71	PREDICTED: uncharacterized protein LOC104095751, partial [Nicotiana tomentosifor...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022818T1	MELO3C022818T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12876	N4BP1-RELATED	coord: 17..91 score: 4.6
None	No IPR available	PANTHER	PTHR12876:SF31	SUBFAMILY NOT NAMED	coord: 17..91 score: 4.6
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 27..93 score: 2.08

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C022818	Cucurbita moschata (Rifu)	cmomeB240
MELO3C022818	Cucurbita moschata (Rifu)	cmomeB626
MELO3C022818	Wild cucumber (PI 183967)	cpimeB343
MELO3C022818	Cucumber (Chinese Long) v2	cumeB347
MELO3C022818	Watermelon (Charleston Gray)	mewcgB023
MELO3C022818	Watermelon (97103) v1	mewmB013
MELO3C022818	Cucurbita pepo (Zucchini)	cpemeB158
MELO3C022818	Cucurbita pepo (Zucchini)	cpemeB360
MELO3C022818	Bottle gourd (USVL1VR-Ls)	lsimeB014
MELO3C022818	Cucumber (Gy14) v2	cgybmeB294
MELO3C022818	Silver-seed gourd	carmeB0531
MELO3C022818	Silver-seed gourd	carmeB0822
MELO3C022818	Cucumber (Chinese Long) v3	cucmeB351
MELO3C022818	Watermelon (97103) v2	mewmbB020
MELO3C022818	Wax gourd	mewgoB015
MELO3C022818	Cucumber (Gy14) v1	cgymeB007
MELO3C022818	Cucurbita maxima (Rimu)	cmameB252
MELO3C022818	Cucurbita maxima (Rimu)	cmameB636