MELO3C022813 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C022813
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
Locationchr9 : 12249861 .. 12251016 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATCTCAAGAGTCTCACAAGCTATTAAGCAACCAAAGAACAACACAAACAATGGAAATGGTAATGAAATTCCAGCTCCTGCGACAAGGCCGGCCTCTTCTCCTTCAAAAGCTCTCAGCAGCCTTTCACAAAATAAAACCTACATTTGGCAATCCCCAAAACGTTCCTCCAGGTGGGCCCCTCAACCGTTTTCTACCTCTCCAATAATCCCTCCAGGAGCTGTCTTCTGTATGCCCATCTTACCCTTACATTTATATGTGTGAATGATCGGGGGCCCAACAATTTTCTTCTTTATAAAAAGTTTTCTCAACTCACTCCAAGCAATTATTTCTTATTCAGGTTTATTGCTGGAAAGGCCTTCGGTTTTCAGCTCGGCAGGATTTAGAAGGATTTTCTCGGGTATGGTTCAAATTCAATAAATTTTTTTTAGCATTTTTATCTGATGAAAATCTGATACTGTTGTTTCAACGTGGAATTTGCAGTTCACCGACCATGGCATTGAAGGTGTTGTGCCATTGGAACTCCTGCCACCTGATGTACGAGCCAAGTACCAAGCCAAACCAAATGAGAGATCTAAACGTGCTAAAAGGGAAGAAGCAAAAGGGGCAGTCCAGCAAGTTGATGAAAATCAGGTAGACTTCAATTTAGATGCATTTGTCATACATTGGTCCTTTTAGGGTAATGTCAATGTTTTACTGGGTGTTTAAACTGGTCTCTGAAGAATGTAGATTTGAAATAACATGTTCGAAATTCTTCCAAATGGTAAGACAATGATTATGGGGTCTTGTGGACTTCAATTTTTCATTTTAATTTTTAGCTTTCATGTTCTCTATTCAAGTTTTTATTTTCTAGATTGTTCTAATATTTTCTATCAATGGATTTTGGCACAAGATGGCAACTCCAGCTAGTGAGAATGATGGCGAAGGAACCAGAAGTGATCCTGATGGGCCATCGGCAGGGATGGATGTCGATACAGCTATTGCCACGGGCAATGTATCTCAAGGTGGTATTTCAACTCCAGAAGAAAATAAACTAAGCTCTGACACGGATATTGGTCAAGAGGCAGGCCAGTTGGAAGCCGATGCTGAGGTAGAGCCGGGCATGATTGATGGCGAGACAGATGCAGAGGTTGATTTGGACACTGCAGGTTGA

mRNA sequence

ATGGAAATCTCAAGAGTCTCACAAGCTATTAAGCAACCAAAGAACAACACAAACAATGGAAATGGTAATGAAATTCCAGCTCCTGCGACAAGGCCGGCCTCTTCTCCTTCAAAAGCTCTCAGCAGCCTTTCACAAAATAAAACCTACATTTGGCAATCCCCAAAACGTTCCTCCAGGTGGGCCCCTCAACCGTTTTCTACCTCTCCAATAATCCCTCCAGGAGCTGTCTTCTCTCGGCAGGATTTAGAAGGATTTTCTCGGTTCACCGACCATGGCATTGAAGGTGTTGTGCCATTGGAACTCCTGCCACCTGATGTACGAGCCAAGTACCAAGCCAAACCAAATGAGAGATCTAAACGTGCTAAAAGGGAAGAAGCAAAAGGGGCAGTCCAGCAAGTTGATGAAAATCAGATGGCAACTCCAGCTAGTGAGAATGATGGCGAAGGAACCAGAAGTGATCCTGATGGGCCATCGGCAGGGATGGATGTCGATACAGCTATTGCCACGGGCAATGTATCTCAAGGTGGTATTTCAACTCCAGAAGAAAATAAACTAAGCTCTGACACGGATATTGGTCAAGAGGCAGGCCAGTTGGAAGCCGATGCTGAGGTAGAGCCGGGCATGATTGATGGCGAGACAGATGCAGAGGTTGATTTGGACACTGCAGGTTGA

Coding sequence (CDS)

ATGGAAATCTCAAGAGTCTCACAAGCTATTAAGCAACCAAAGAACAACACAAACAATGGAAATGGTAATGAAATTCCAGCTCCTGCGACAAGGCCGGCCTCTTCTCCTTCAAAAGCTCTCAGCAGCCTTTCACAAAATAAAACCTACATTTGGCAATCCCCAAAACGTTCCTCCAGGTGGGCCCCTCAACCGTTTTCTACCTCTCCAATAATCCCTCCAGGAGCTGTCTTCTCTCGGCAGGATTTAGAAGGATTTTCTCGGTTCACCGACCATGGCATTGAAGGTGTTGTGCCATTGGAACTCCTGCCACCTGATGTACGAGCCAAGTACCAAGCCAAACCAAATGAGAGATCTAAACGTGCTAAAAGGGAAGAAGCAAAAGGGGCAGTCCAGCAAGTTGATGAAAATCAGATGGCAACTCCAGCTAGTGAGAATGATGGCGAAGGAACCAGAAGTGATCCTGATGGGCCATCGGCAGGGATGGATGTCGATACAGCTATTGCCACGGGCAATGTATCTCAAGGTGGTATTTCAACTCCAGAAGAAAATAAACTAAGCTCTGACACGGATATTGGTCAAGAGGCAGGCCAGTTGGAAGCCGATGCTGAGGTAGAGCCGGGCATGATTGATGGCGAGACAGATGCAGAGGTTGATTTGGACACTGCAGGTTGA

Protein sequence

MEISRVSQAIKQPKNNTNNGNGNEIPAPATRPASSPSKALSSLSQNKTYIWQSPKRSSRWAPQPFSTSPIIPPGAVFSRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQMATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQLEADAEVEPGMIDGETDAEVDLDTAG*
Homology
[Close]
BLAST of MELO3C022813 vs. Swiss-Prot
Match: THOC1_ARATH (THO complex subunit 1 OS=Arabidopsis thaliana GN=THO1 PE=1 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-28
Identity = 69/139 (49.64%), Postives = 87/139 (62.59%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDLEGFSRFT+ GIEGVVP+ELLPP+VR+KYQAKPNE++KRAK+EE KG   + + NQ
Sbjct: 466 ARQDLEGFSRFTEMGIEGVVPVELLPPEVRSKYQAKPNEKAKRAKKEETKGGSHETEGNQ 525

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKL--SSDTDIGQEA 197
           +    SE + EG R D +   +    DT             TPEE +    SDT+ GQEA
Sbjct: 526 IGVSNSEAEAEGGRGDAETMESDAIADT------------PTPEEQQRLGGSDTENGQEA 585

Query: 198 GQLEADAEVEPGMIDGETD 215
           GQ+E     E G++D + D
Sbjct: 586 GQIEDGETEEAGLMDTDLD 592

[Close]
BLAST of MELO3C022813 vs. TrEMBL
Match: A0A0A0KTL0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G407100 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 3.1e-75
Identity = 144/146 (98.63%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAK+EEAKGAVQQVDENQ
Sbjct: 469 ARQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKKEEAKGAVQQVDENQ 528

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 197
           MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ
Sbjct: 529 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 588

Query: 198 LEADAEVEPGMIDGETDAEVDLDTAG 224
           LEADAEVEPGMIDGETDAEVDLDTAG
Sbjct: 589 LEADAEVEPGMIDGETDAEVDLDTAG 614

[Close]
BLAST of MELO3C022813 vs. TrEMBL
Match: B9GLX5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s06900g PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-51
Identity = 104/147 (70.75%), Postives = 122/147 (82.99%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDL+GFSRFTDHGIEGVVPLELLPPDVR+KYQAKPN+RSKRAK++E KGA+ QV++NQ
Sbjct: 462 ARQDLDGFSRFTDHGIEGVVPLELLPPDVRSKYQAKPNDRSKRAKKDEPKGALHQVEDNQ 521

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEEN-KLSSDTDIGQEAG 197
           ++TPASE DGEG R D +  +A MD D    TG++SQ G  TP+E+ K  SDTD GQEAG
Sbjct: 522 ISTPASEIDGEGIRIDLEASAAPMDTDVTATTGSISQSGTPTPDEHQKQGSDTDGGQEAG 581

Query: 198 QLEADAEVEPGMIDGETDAEVDLDTAG 224
           QLEADAE E GMIDGETDAEVDL+  G
Sbjct: 582 QLEADAEAEAGMIDGETDAEVDLEAVG 608

[Close]
BLAST of MELO3C022813 vs. TrEMBL
Match: A0A0B2PTA1_GLYSO (THO complex subunit 1 OS=Glycine soja GN=glysoja_034427 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.3e-49
Identity = 106/147 (72.11%), Postives = 122/147 (82.99%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDLEGFS+FTDHGIEGVVPLELLPPDVR+KYQAKPN+RSKR+K+EE KG   Q++ENQ
Sbjct: 297 ARQDLEGFSKFTDHGIEGVVPLELLPPDVRSKYQAKPNDRSKRSKKEETKGTAHQIEENQ 356

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEE-NKLSSDTDIGQEAG 197
           +AT A+E DG+G R+D    S  M+ D A A G  +QGG +TPEE  KLSSDTD GQEAG
Sbjct: 357 IATNATEIDGDGIRTDTTATS--MEFDAATAPG--TQGGTTTPEELQKLSSDTDGGQEAG 416

Query: 198 QLEADAEVEPGMIDGETDAEVDLDTAG 224
           QLEADAEVE GMIDGETDA+VDLDT G
Sbjct: 417 QLEADAEVEAGMIDGETDADVDLDTVG 439

[Close]
BLAST of MELO3C022813 vs. TrEMBL
Match: A0A0R4J354_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G133800 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 2.3e-49
Identity = 106/147 (72.11%), Postives = 122/147 (82.99%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDLEGFS+FTDHGIEGVVPLELLPPDVR+KYQAKPN+RSKR+K+EE KG   Q++ENQ
Sbjct: 463 ARQDLEGFSKFTDHGIEGVVPLELLPPDVRSKYQAKPNDRSKRSKKEETKGTAHQIEENQ 522

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEE-NKLSSDTDIGQEAG 197
           +AT A+E DG+G R+D    S  M+ D A A G  +QGG +TPEE  KLSSDTD GQEAG
Sbjct: 523 IATNATEIDGDGIRTDTTATS--MEFDAATAPG--TQGGTTTPEELQKLSSDTDGGQEAG 582

Query: 198 QLEADAEVEPGMIDGETDAEVDLDTAG 224
           QLEADAEVE GMIDGETDA+VDLDT G
Sbjct: 583 QLEADAEVEAGMIDGETDADVDLDTVG 605

[Close]
BLAST of MELO3C022813 vs. TrEMBL
Match: A0A0S3SIY3_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G155700 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47
Identity = 102/147 (69.39%), Postives = 120/147 (81.63%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDLEGFS+FTDHGIEGVVPLELLPPDVR+KYQAKPN+RSKR+K+EE KG+  QV+ENQ
Sbjct: 38  ARQDLEGFSKFTDHGIEGVVPLELLPPDVRSKYQAKPNDRSKRSKKEETKGSAHQVEENQ 97

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEE-NKLSSDTDIGQEAG 197
           +AT A+E DG+G R+  D  +  M+ D A   G  +QGG  TPEE  K SSDTD+GQEAG
Sbjct: 98  IATTATEMDGDGIRT--DNTATPMEFDGASVPG--TQGGTPTPEELQKHSSDTDVGQEAG 157

Query: 198 QLEADAEVEPGMIDGETDAEVDLDTAG 224
           QLEADAEVE G+IDGETDA+ DLDT G
Sbjct: 158 QLEADAEVEAGIIDGETDADADLDTVG 180

[Close]
BLAST of MELO3C022813 vs. TAIR10
Match: AT5G09860.1 (AT5G09860.1 nuclear matrix protein-related)

HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29
Identity = 69/139 (49.64%), Postives = 87/139 (62.59%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDLEGFSRFT+ GIEGVVP+ELLPP+VR+KYQAKPNE++KRAK+EE KG   + + NQ
Sbjct: 466 ARQDLEGFSRFTEMGIEGVVPVELLPPEVRSKYQAKPNEKAKRAKKEETKGGSHETEGNQ 525

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKL--SSDTDIGQEA 197
           +    SE + EG R D +   +    DT             TPEE +    SDT+ GQEA
Sbjct: 526 IGVSNSEAEAEGGRGDAETMESDAIADT------------PTPEEQQRLGGSDTENGQEA 585

Query: 198 GQLEADAEVEPGMIDGETD 215
           GQ+E     E G++D + D
Sbjct: 586 GQIEDGETEEAGLMDTDLD 592

[Close]
BLAST of MELO3C022813 vs. NCBI nr
Match: gi|659121088|ref|XP_008460496.1| (PREDICTED: THO complex subunit 1 [Cucumis melo])

HSP 1 Score: 290.8 bits (743), Expect = 2.0e-75
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ
Sbjct: 469 ARQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 528

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 197
           MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ
Sbjct: 529 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 588

Query: 198 LEADAEVEPGMIDGETDAEVDLDTAG 224
           LEADAEVEPGMIDGETDAEVDLDTAG
Sbjct: 589 LEADAEVEPGMIDGETDAEVDLDTAG 614

[Close]
BLAST of MELO3C022813 vs. NCBI nr
Match: gi|778702512|ref|XP_011655214.1| (PREDICTED: THO complex subunit 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 4.5e-75
Identity = 144/146 (98.63%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAK+EEAKGAVQQVDENQ
Sbjct: 469 ARQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKKEEAKGAVQQVDENQ 528

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 197
           MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ
Sbjct: 529 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 588

Query: 198 LEADAEVEPGMIDGETDAEVDLDTAG 224
           LEADAEVEPGMIDGETDAEVDLDTAG
Sbjct: 589 LEADAEVEPGMIDGETDAEVDLDTAG 614

[Close]
BLAST of MELO3C022813 vs. NCBI nr
Match: gi|778702526|ref|XP_011655218.1| (PREDICTED: THO complex subunit 1 isoform X4 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 4.5e-75
Identity = 144/146 (98.63%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAK+EEAKGAVQQVDENQ
Sbjct: 469 ARQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKKEEAKGAVQQVDENQ 528

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 197
           MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ
Sbjct: 529 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 588

Query: 198 LEADAEVEPGMIDGETDAEVDLDTAG 224
           LEADAEVEPGMIDGETDAEVDLDTAG
Sbjct: 589 LEADAEVEPGMIDGETDAEVDLDTAG 614

[Close]
BLAST of MELO3C022813 vs. NCBI nr
Match: gi|778702518|ref|XP_011655216.1| (PREDICTED: THO complex subunit 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 4.5e-75
Identity = 144/146 (98.63%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAK+EEAKGAVQQVDENQ
Sbjct: 468 ARQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKKEEAKGAVQQVDENQ 527

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 197
           MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ
Sbjct: 528 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 587

Query: 198 LEADAEVEPGMIDGETDAEVDLDTAG 224
           LEADAEVEPGMIDGETDAEVDLDTAG
Sbjct: 588 LEADAEVEPGMIDGETDAEVDLDTAG 613

[Close]
BLAST of MELO3C022813 vs. NCBI nr
Match: gi|778702521|ref|XP_011655217.1| (PREDICTED: THO complex subunit 1 isoform X3 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 4.5e-75
Identity = 144/146 (98.63%), Postives = 146/146 (100.00%), Query Frame = 1 

Query: 78  SRQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKREEAKGAVQQVDENQ 137
           +RQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAK+EEAKGAVQQVDENQ
Sbjct: 468 ARQDLEGFSRFTDHGIEGVVPLELLPPDVRAKYQAKPNERSKRAKKEEAKGAVQQVDENQ 527

Query: 138 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 197
           MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ
Sbjct: 528 MATPASENDGEGTRSDPDGPSAGMDVDTAIATGNVSQGGISTPEENKLSSDTDIGQEAGQ 587

Query: 198 LEADAEVEPGMIDGETDAEVDLDTAG 224
           LEADAEVEPGMIDGETDAEVDLDTAG
Sbjct: 588 LEADAEVEPGMIDGETDAEVDLDTAG 613

The following BLAST results are available for this feature:
BLAST of MELO3C022813 vs. Swiss-Prot
Match NameE-valueIdentityDescription
THOC1_ARATH2.4e-2849.64THO complex subunit 1 OS=Arabidopsis thaliana GN=THO1 PE=1 SV=1[more]
BLAST of MELO3C022813 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTL0_CUCSA3.1e-7598.63Uncharacterized protein OS=Cucumis sativus GN=Csa_5G407100 PE=4 SV=1[more]
B9GLX5_POPTR2.4e-5170.75Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s06900g PE=4 SV=1[more]
A0A0B2PTA1_GLYSO2.3e-4972.11THO complex subunit 1 OS=Glycine soja GN=glysoja_034427 PE=4 SV=1[more]
A0A0R4J354_SOYBN2.3e-4972.11Uncharacterized protein OS=Glycine max GN=GLYMA_04G133800 PE=4 SV=1[more]
A0A0S3SIY3_PHAAN1.6e-4769.39Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G155700 PE=... [more]
BLAST of MELO3C022813 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09860.11.4e-2949.64 nuclear matrix protein-related[more]
BLAST of MELO3C022813 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659121088|ref|XP_008460496.1|2.0e-7599.32PREDICTED: THO complex subunit 1 [Cucumis melo][more]
gi|778702512|ref|XP_011655214.1|4.5e-7598.63PREDICTED: THO complex subunit 1 isoform X1 [Cucumis sativus][more]
gi|778702526|ref|XP_011655218.1|4.5e-7598.63PREDICTED: THO complex subunit 1 isoform X4 [Cucumis sativus][more]
gi|778702518|ref|XP_011655216.1|4.5e-7598.63PREDICTED: THO complex subunit 1 isoform X2 [Cucumis sativus][more]
gi|778702521|ref|XP_011655217.1|4.5e-7598.63PREDICTED: THO complex subunit 1 isoform X3 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU43258melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022813T1MELO3C022813T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU43258MU43258transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C022813Silver-seed gourdcarmeB0531
MELO3C022813Silver-seed gourdcarmeB0822
MELO3C022813Cucumber (Chinese Long) v3cucmeB351
MELO3C022813Watermelon (97103) v2mewmbB020
MELO3C022813Wax gourdmewgoB015
MELO3C022813Cucumber (Gy14) v1cgymeB007
MELO3C022813Cucurbita maxima (Rimu)cmameB252
MELO3C022813Cucurbita maxima (Rimu)cmameB636
MELO3C022813Cucurbita moschata (Rifu)cmomeB240
MELO3C022813Cucurbita moschata (Rifu)cmomeB626
MELO3C022813Wild cucumber (PI 183967)cpimeB343
MELO3C022813Cucumber (Chinese Long) v2cumeB347
MELO3C022813Watermelon (Charleston Gray)mewcgB023
MELO3C022813Watermelon (97103) v1mewmB013
MELO3C022813Cucurbita pepo (Zucchini)cpemeB158
MELO3C022813Cucurbita pepo (Zucchini)cpemeB360
MELO3C022813Bottle gourd (USVL1VR-Ls)lsimeB014
MELO3C022813Cucumber (Gy14) v2cgybmeB294