MELO3C022784 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C022784
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATP phosphoribosyltransferase regulatory subunit
Locationchr9 : 11678507 .. 11678782 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCCATATTATGATGATCAGTCCTATGTGTTCGGCAAAGATCAGGCTACAAGAGCACATTTAGAGACCTTTGTTGATGTGAGGTTTAATGTGCCAAACAATTTCGATGGTGTTCCCCTTGGTGATTCACATGATCCGAAGATCCTGATGATATATATCCAGACAGTGGATATGTTACCAGATGAAATGTTGGGAACACGGGTAGGTCGATCAAGTGAAGGAAAAAAATGTTTCAAGTGGAAGCAAGAGGAAATGAGGTGGCCAATTGTTTGA

mRNA sequence

ATGTTTCCATATTATGATGATCAGTCCTATGTGTTCGGCAAAGATCAGGCTACAAGAGCACATTTAGAGACCTTTGTTGATGTGAGGTTTAATGTGCCAAACAATTTCGATGGTGTTCCCCTTGGTGATTCACATGATCCGAAGATCCTGATGATATATATCCAGACAGTGGATATGTTACCAGATGAAATGTTGGGAACACGGGTAGGTCGATCAAGTGAAGGAAAAAAATGTTTCAAGTGGAAGCAAGAGGAAATGAGGTGGCCAATTGTTTGA

Coding sequence (CDS)

ATGTTTCCATATTATGATGATCAGTCCTATGTGTTCGGCAAAGATCAGGCTACAAGAGCACATTTAGAGACCTTTGTTGATGTGAGGTTTAATGTGCCAAACAATTTCGATGGTGTTCCCCTTGGTGATTCACATGATCCGAAGATCCTGATGATATATATCCAGACAGTGGATATGTTACCAGATGAAATGTTGGGAACACGGGTAGGTCGATCAAGTGAAGGAAAAAAATGTTTCAAGTGGAAGCAAGAGGAAATGAGGTGGCCAATTGTTTGA

Protein sequence

MFPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNFDGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRSSEGKKCFKWKQEEMRWPIV*
Homology
[Close]
BLAST of MELO3C022784 vs. TrEMBL
Match: A0A0A0M036_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G654880 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 5.7e-15
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 

Query: 14 KDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRS 73
          KDQAT   LE FVD++ NVPN F DGVP GDSHDP ILM+Y Q +DM  DEMLGT VG++
Sbjct: 25 KDQATEGRLEIFVDIKSNVPNQFNDGVPFGDSHDPNILMMYSQGMDMSSDEMLGTCVGQT 84

Query: 74 SEGK 77
          SEG+
Sbjct: 85 SEGR 88

[Close]
BLAST of MELO3C022784 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-07
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 1 

Query: 2   FPYYDDQSYVFGKDQATRAHLETFVDVRFNVP-NNFDGVPLGDSHDPKILMIYIQTVDML 61
           FPYYD+ +YVFG+D+AT    ETF DV  N P   +D   +GD ++     +Y + VD+L
Sbjct: 443 FPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE-DFPPVYSRGVDIL 502

Query: 62  PDEMLGTRVGRSSEGK 77
            D++  +R  R+SEGK
Sbjct: 503 QDDVRASRPSRASEGK 517

[Close]
BLAST of MELO3C022784 vs. NCBI nr
Match: gi|659111565|ref|XP_008455793.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-17
Identity = 48/78 (61.54%), Postives = 56/78 (71.79%), Query Frame = 1 

Query: 2   FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDML 61
           FPYYDD +YVFGKD+AT A  ETFVDV  NVPN F D +PLGDSHD  I  +Y Q V + 
Sbjct: 75  FPYYDDLTYVFGKDRATGARSETFVDVGSNVPNMFNDTIPLGDSHDEDIPTMYSQGVHIS 134

Query: 62  PDEMLGTRVGRSSEGKKC 79
           PDEM G R G++SE + C
Sbjct: 135 PDEMFGIRAGQASERRNC 152

[Close]
BLAST of MELO3C022784 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 5.7e-16
Identity = 47/78 (60.26%), Postives = 54/78 (69.23%), Query Frame = 1 

Query: 2   FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDML 61
           FPYYDD SYVFGKD+AT A  ETF +V  NV N F D +PLGDSHD  I  +Y Q V M 
Sbjct: 126 FPYYDDLSYVFGKDRATGARSETFPNVGSNVSNMFNDTIPLGDSHDEDIPTMYSQGVHMS 185

Query: 62  PDEMLGTRVGRSSEGKKC 79
           PDEM G R G++SE + C
Sbjct: 186 PDEMFGIRAGQASERRNC 203

[Close]
BLAST of MELO3C022784 vs. NCBI nr
Match: gi|659113923|ref|XP_008456820.1| (PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo])

HSP 1 Score: 88.6 bits (218), Expect = 6.3e-15
Identity = 47/74 (63.51%), Postives = 51/74 (68.92%), Query Frame = 1 

Query: 2   FPYYDDQSYVFGKDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDML 61
           FPYYDD SYVFG D AT AH ETF D   NV N F DGVPLGDSH+  IL IY Q V M 
Sbjct: 83  FPYYDDLSYVFGNDGATGAHSETFADGGSNVSNMFNDGVPLGDSHNQDILTIYSQGVHMS 142

Query: 62  PDEMLGTRVGRSSE 75
            DE+ G R G++SE
Sbjct: 143 LDEIFGIRAGQASE 156

[Close]
BLAST of MELO3C022784 vs. NCBI nr
Match: gi|700211563|gb|KGN66659.1| (hypothetical protein Csa_1G654880 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 8.2e-15
Identity = 43/64 (67.19%), Postives = 50/64 (78.12%), Query Frame = 1 

Query: 14 KDQATRAHLETFVDVRFNVPNNF-DGVPLGDSHDPKILMIYIQTVDMLPDEMLGTRVGRS 73
          KDQAT   LE FVD++ NVPN F DGVP GDSHDP ILM+Y Q +DM  DEMLGT VG++
Sbjct: 25 KDQATEGRLEIFVDIKSNVPNQFNDGVPFGDSHDPNILMMYSQGMDMSSDEMLGTCVGQT 84

Query: 74 SEGK 77
          SEG+
Sbjct: 85 SEGR 88

[Close]
BLAST of MELO3C022784 vs. NCBI nr
Match: gi|307135889|gb|ADN33754.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-07
Identity = 33/76 (43.42%), Postives = 48/76 (63.16%), Query Frame = 1 

Query: 2   FPYYDDQSYVFGKDQATRAHLETFVDVRFNVP-NNFDGVPLGDSHDPKILMIYIQTVDML 61
           FPYYD+ +YVFG+D+AT    ETF DV  N P   +D   +GD ++     +Y + VD+L
Sbjct: 443 FPYYDELTYVFGRDRATGRFAETFADVGSNEPGGGYDRFDMGDGNE-DFPPVYSRGVDIL 502

Query: 62  PDEMLGTRVGRSSEGK 77
            D++  +R  R+SEGK
Sbjct: 503 QDDVRASRPSRASEGK 517

The following BLAST results are available for this feature:
BLAST of MELO3C022784 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0M036_CUCSA5.7e-1567.19Uncharacterized protein OS=Cucumis sativus GN=Csa_1G654880 PE=4 SV=1[more]
E5GBB2_CUCME1.5e-0743.42Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
BLAST of MELO3C022784 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659111565|ref|XP_008455793.1|2.3e-1761.54PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo][more]
gi|659082641|ref|XP_008441954.1|5.7e-1660.26PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo][more]
gi|659113923|ref|XP_008456820.1|6.3e-1563.51PREDICTED: uncharacterized protein LOC103496659 [Cucumis melo][more]
gi|700211563|gb|KGN66659.1|8.2e-1567.19hypothetical protein Csa_1G654880 [Cucumis sativus][more]
gi|307135889|gb|ADN33754.1|2.2e-0743.42retrotransposon protein [Cucumis melo subsp. melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022784T1MELO3C022784T1mRNA