MELO3C022614 (gene) Melon (DHL92) v3.5.1

NameMELO3C022614
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionZinc finger E-box-binding homeobox 1
Locationchr10 : 16270953 .. 16271196 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATCAAGAATAATGGTATTCCCAATGCCTTTTTTGGGATTTTCCGATGCCACGCGACTGCGTCGGGAAATTCCCTTTATAAACGATTCAGTTCTGTATTTCACAGAATTGAAATTGAAAGGGGAAAGGAAGAAGAGAACTGCGTTGAGGCTTCCGTTTCGTCGTCATTATCGTCGCTGCCTTCCGTTCCATCGTCGTTGCCGTCCCTCGCCGTTGTTCTACCGCCTTCTGCCACCTTAG

mRNA sequence

ATGAACATCAAGAATAATGGTATTCCCAATGCCTTTTTTGGGATTTTCCGATGCCACGCGACTGCGTCGGGAAATTCCCTTTATAAACGATTCAGTTCTGTATTTCACAGAATTGAAATTGAAAGGGGAAAGGAAGAAGAGAACTGCGTTGAGGCTTCCGTTTCGTCGTCATTATCGTCGCTGCCTTCCGTTCCATCGTCGTTGCCGTCCCTCGCCGTTGTTCTACCGCCTTCTGCCACCTTAG

Coding sequence (CDS)

ATGAACATCAAGAATAATGGTATTCCCAATGCCTTTTTTGGGATTTTCCGATGCCACGCGACTGCGTCGGGAAATTCCCTTTATAAACGATTCAGTTCTGTATTTCACAGAATTGAAATTGAAAGGGGAAAGGAAGAAGAGAACTGCGTTGAGGCTTCCGTTTCGTCGTCATTATCGTCGCTGCCTTCCGTTCCATCGTCGTTGCCGTCCCTCGCCGTTGTTCTACCGCCTTCTGCCACCTTAG

Protein sequence

MNIKNNGIPNAFFGIFRCHATASGNSLYKRFSSVFHRIEIERGKEEENCVEASVSSSLSSLPSVPSSLPSLAVVLPPSATL
BLAST of MELO3C022614 vs. TrEMBL
Match: E5GCF4_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 5.0e-07
Identity = 41/81 (50.62%), Postives = 45/81 (55.56%), Query Frame = 1

Query: 1  MNIKNNGIPNAFFGIFRCHATASGNSLYKRFSSVFHRIEIERGKEEENCVEASVSSSLSS 60
          M+I N   P+A  GI RC  T SGN LYKRFSSV +R E ERG        AS+      
Sbjct: 1  MSIGNPLFPDALLGISRCCTTGSGNPLYKRFSSVKYRTETERG--------ASIFRRYCR 60

Query: 61 LPSVPSSLPSLAVVLPPSATL 82
               SSL SLA V PPSATL
Sbjct: 61 RRLSLSSLLSLAAVPPPSATL 73

BLAST of MELO3C022614 vs. NCBI nr
Match: gi|307136332|gb|ADN34153.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 61.6 bits (148), Expect = 7.2e-07
Identity = 41/81 (50.62%), Postives = 45/81 (55.56%), Query Frame = 1

Query: 1  MNIKNNGIPNAFFGIFRCHATASGNSLYKRFSSVFHRIEIERGKEEENCVEASVSSSLSS 60
          M+I N   P+A  GI RC  T SGN LYKRFSSV +R E ERG        AS+      
Sbjct: 1  MSIGNPLFPDALLGISRCCTTGSGNPLYKRFSSVKYRTETERG--------ASIFRRYCR 60

Query: 61 LPSVPSSLPSLAVVLPPSATL 82
               SSL SLA V PPSATL
Sbjct: 61 RRLSLSSLLSLAAVPPPSATL 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
E5GCF4_CUCME5.0e-0750.62Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|307136332|gb|ADN34153.1|7.2e-0750.62hypothetical protein [Cucumis melo subsp. melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022614T1MELO3C022614T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C022614Cucumber (Gy14) v2cgybmeB312
MELO3C022614Cucumber (Chinese Long) v3cucmeB372
MELO3C022614Watermelon (97103) v2mewmbB048
MELO3C022614Wax gourdmewgoB056
MELO3C022614Watermelon (Charleston Gray)mewcgB044
MELO3C022614Bottle gourd (USVL1VR-Ls)lsimeB083