MELO3C022575.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C022575.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic
Locationchr10 : 16124939 .. 16125467 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGAGGGGGCGCGGCTCGGCTGGGAATCGGCTCGCAGAGAGGGCGCAGGCGCGAGTGCATGCGGGCACGACTTGATGCTCGGGCGCAGCTTGACGCTCGAGTGGGACTTGACGCTTGGGCGCGACTTGACGCTCGGGCGCGACTTGACGCTCGGGCGCGACTTGACGCTCAGATCGGGTGGCAGCGCGGAGCGACTGGATGCACGAGTCGAGTTTTGGGTCGAAGGCGCGGCGTTTCAGTTCGGGTCGGAACTACTCGGCTGGGTGACGCGGCCTTCGAACGGTTAGGAGTCTTCATCCTTTCTCTTTTTGTTCATGCATAGGCGCTGCTCGGCGATGTGACGGGGGCTACGGCAACCGGCGACCGGCGAACCTCACAGTGGCGGCGTTGGTTGGGGCGCGACGAATGACGGAAGAAAACGGGGCGCGGCTTAGAGAGGCGCGGGTCAGCTGCGCTTCGCAAGCCTTCACTCGGACGCGACGGCTGGCGGAAGAACTCGGTGGCGCGGCGGGCTGTGGTCGGCAGTGA

mRNA sequence

CAGGAGGGGGCGCGGCTCGGCTGGGAATCGGCTCGCAGAGAGGGCGCAGGCGCGAGTGCATGCGGGCACGACTTGATGCTCGGGCGCAGCTTGACGCTCGAGTGGGACTTGACGCTTGGGCGCGACTTGACGCTCGGGCGCGACTTGACGCTCGGGCGCGACTTGACGCTCAGATCGGGTGGCAGCGCGGAGCGACTGGATGCACGAGTCGAGTTTTGGGTCGAAGGCGCGGCGTTTCAGTTCGGGTCGGAACTACTCGGCTGGGTGACGCGGCCTTCGAACGGCGCTGCTCGGCGATGTGACGGGGGCTACGGCAACCGGCGACCGGCGAACCTCACAGTGGCGGCGTTGGTTGGGGCGCGACGAATGACGGAAGAAAACGGGGCGCGGCTTAGAGAGGCGCGGGTCAGCTGCGCTTCGCAAGCCTTCACTCGGACGCGACGGCTGGCGGAAGAACTCGGTGGCGCGGCGGGCTGTGGTCGGCAGTGA

Coding sequence (CDS)

ATGCTCGGGCGCAGCTTGACGCTCGAGTGGGACTTGACGCTTGGGCGCGACTTGACGCTCGGGCGCGACTTGACGCTCGGGCGCGACTTGACGCTCAGATCGGGTGGCAGCGCGGAGCGACTGGATGCACGAGTCGAGTTTTGGGTCGAAGGCGCGGCGTTTCAGTTCGGGTCGGAACTACTCGGCTGGGTGACGCGGCCTTCGAACGGCGCTGCTCGGCGATGTGACGGGGGCTACGGCAACCGGCGACCGGCGAACCTCACAGTGGCGGCGTTGGTTGGGGCGCGACGAATGACGGAAGAAAACGGGGCGCGGCTTAGAGAGGCGCGGGTCAGCTGCGCTTCGCAAGCCTTCACTCGGACGCGACGGCTGGCGGAAGAACTCGGTGGCGCGGCGGGCTGTGGTCGGCAGTGA

Protein sequence

MLGRSLTLEWDLTLGRDLTLGRDLTLGRDLTLRSGGSAERLDARVEFWVEGAAFQFGSELLGWVTRPSNGAARRCDGGYGNRRPANLTVAALVGARRMTEENGARLREARVSCASQAFTRTRRLAEELGGAAGCGRQ
Homology
The following BLAST results are available for this feature:
BLAST of MELO3C022575.2 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO3C022575.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C022575.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C022575.2 vs. TrEMBL
Match NameE-valueIdentityDescription
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0006629 lipid metabolic process
biological_process GO:2001295 malonyl-CoA biosynthetic process
cellular_component GO:0009317 acetyl-CoA carboxylase complex
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009536 plastid
molecular_function GO:0003989 acetyl-CoA carboxylase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022575.2.1MELO3C022575.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C022575.2Cucumber (Gy14) v2cgybmedB311
MELO3C022575.2Cucumber (Gy14) v1cgymedB459
MELO3C022575.2Cucurbita maxima (Rimu)cmamedB734
MELO3C022575.2Cucurbita moschata (Rifu)cmomedB729
MELO3C022575.2Cucurbita pepo (Zucchini)cpemedB430
MELO3C022575.2Wild cucumber (PI 183967)cpimedB365
MELO3C022575.2Cucumber (Chinese Long) v2cumedB360
MELO3C022575.2Bottle gourd (USVL1VR-Ls)lsimedB088
MELO3C022575.2Watermelon (Charleston Gray)medwcgB044
MELO3C022575.2Watermelon (97103) v1medwmB077
MELO3C022575.2Silver-seed gourdcarmedB0669
MELO3C022575.2Cucumber (Chinese Long) v3cucmedB363
MELO3C022575.2Watermelon (97103) v2medwmbB044