MELO3C022503.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C022503.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr11 : 34141394 .. 34141543 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGATCTGAGAGAGAATGGCGTGGCGGGAGAGGAGACAACCAGATCTGAGAAATTGAGAGTGGTGTGGCAGCCGGCTGGAGGTGAGGCGGGCGGAGGTGAGAGTCGGAGAGGTAGACGAAAGTGGAGCGGTGGCCGTGGACGGTGA

mRNA sequence

ATGGCAGATCTGAGAGAGAATGGCGTGGCGGGAGAGGAGACAACCAGATCTGAGAAATTGAGAGTGGTGTGGCAGCCGGCTGGAGGTGAGGCGGGCGGAGGTGAGAGTCGGAGAGGTAGACGAAAGTGGAGCGGTGGCCGTGGACGGTGA

Coding sequence (CDS)

ATGGCAGATCTGAGAGAGAATGGCGTGGCGGGAGAGGAGACAACCAGATCTGAGAAATTGAGAGTGGTGTGGCAGCCGGCTGGAGGTGAGGCGGGCGGAGGTGAGAGTCGGAGAGGTAGACGAAAGTGGAGCGGTGGCCGTGGACGGTGA

Protein sequence

MADLRENGVAGEETTRSEKLRVVWQPAGGEAGGGESRRGRRKWSGGRGR
Homology
[Close]
BLAST of MELO3C022503.2 vs. NCBI nr
Match: KGN46239.1 (hypothetical protein Csa_6G077360 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 4.5e-08
Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 12 EETTRSEKLRVVWQPAGGEAGGGESRRGRRKWSGGRGR 50
          EETTRSEKLRVVWQPAGGEAG GES RGRRKWS GRGR
Sbjct: 3  EETTRSEKLRVVWQPAGGEAGLGESWRGRRKWSSGRGR 40

[Close]
BLAST of MELO3C022503.2 vs. TrEMBL
Match: tr|A0A0A0KBK6|A0A0A0KBK6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077360 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.0e-08
Identity = 35/38 (92.11%), Postives = 35/38 (92.11%), Query Frame = 0 

Query: 12 EETTRSEKLRVVWQPAGGEAGGGESRRGRRKWSGGRGR 50
          EETTRSEKLRVVWQPAGGEAG GES RGRRKWS GRGR
Sbjct: 3  EETTRSEKLRVVWQPAGGEAGLGESWRGRRKWSSGRGR 40

The following BLAST results are available for this feature:
BLAST of MELO3C022503.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46239.14.5e-0892.11hypothetical protein Csa_6G077360 [Cucumis sativus][more]
BLAST of MELO3C022503.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C022503.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C022503.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KBK6|A0A0A0KBK6_CUCSA3.0e-0892.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077360 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022503.2.1MELO3C022503.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..49

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C022503.2Watermelon (97103) v2medwmbB115
MELO3C022503.2Watermelon (97103) v2medwmbB116
MELO3C022503.2Watermelon (97103) v2medwmbB118
MELO3C022503.2Wax gourdmedwgoB096
MELO3C022503.2Wax gourdmedwgoB105
MELO3C022503.2Cucumber (Gy14) v2cgybmedB151
MELO3C022503.2Cucumber (Gy14) v2cgybmedB381
MELO3C022503.2Cucumber (Gy14) v1cgymedB423
MELO3C022503.2Cucumber (Gy14) v1cgymedB426
MELO3C022503.2Cucumber (Gy14) v1cgymedB586
MELO3C022503.2Cucurbita maxima (Rimu)cmamedB239
MELO3C022503.2Cucurbita maxima (Rimu)cmamedB329
MELO3C022503.2Cucurbita maxima (Rimu)cmamedB368
MELO3C022503.2Cucurbita maxima (Rimu)cmamedB848
MELO3C022503.2Cucurbita maxima (Rimu)cmamedB920
MELO3C022503.2Cucurbita moschata (Rifu)cmomedB221
MELO3C022503.2Cucurbita moschata (Rifu)cmomedB316
MELO3C022503.2Cucurbita moschata (Rifu)cmomedB354
MELO3C022503.2Cucurbita moschata (Rifu)cmomedB842
MELO3C022503.2Cucurbita moschata (Rifu)cmomedB909
MELO3C022503.2Cucurbita pepo (Zucchini)cpemedB141
MELO3C022503.2Cucurbita pepo (Zucchini)cpemedB219
MELO3C022503.2Cucurbita pepo (Zucchini)cpemedB334
MELO3C022503.2Cucurbita pepo (Zucchini)cpemedB655
MELO3C022503.2Cucurbita pepo (Zucchini)cpemedB932
MELO3C022503.2Wild cucumber (PI 183967)cpimedB167
MELO3C022503.2Wild cucumber (PI 183967)cpimedB168
MELO3C022503.2Wild cucumber (PI 183967)cpimedB431
MELO3C022503.2Cucumber (Chinese Long) v2cumedB167
MELO3C022503.2Cucumber (Chinese Long) v2cumedB422
MELO3C022503.2Melon (DHL92) v3.6.1medmedB050
MELO3C022503.2Melon (DHL92) v3.6.1medmedB051
MELO3C022503.2Bottle gourd (USVL1VR-Ls)lsimedB019
MELO3C022503.2Bottle gourd (USVL1VR-Ls)lsimedB362
MELO3C022503.2Watermelon (Charleston Gray)medwcgB117
MELO3C022503.2Watermelon (Charleston Gray)medwcgB119
MELO3C022503.2Watermelon (97103) v1medwmB095
MELO3C022503.2Watermelon (97103) v1medwmB096
MELO3C022503.2Watermelon (97103) v1medwmB138
MELO3C022503.2Silver-seed gourdcarmedB0238
MELO3C022503.2Silver-seed gourdcarmedB0628
MELO3C022503.2Silver-seed gourdcarmedB1057
MELO3C022503.2Cucumber (Chinese Long) v3cucmedB169
MELO3C022503.2Cucumber (Chinese Long) v3cucmedB170
MELO3C022503.2Cucumber (Chinese Long) v3cucmedB435