MELO3C022450 (gene) Melon (DHL92) v3.5.1

NameMELO3C022450
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAmaranthin-like lectin
Locationchr11 : 30765988 .. 30766609 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTACCTTCCCAAGTTTGCAGCACTAAAATCTAAGTACAACAACAAGTACTTACGCTATGTGAATGAAAAATCTTCACCAGTCCGTACATTTCTACAATACTCAGGAGACGAAATTCTTACGCCGTTTACGAAGTTCGAGTTTGAAAAAGCTCATTCTGATCCATCTTCGTACCATATAAAATGTTGTTACAACAACAAATATTTGGTTAGTGCTTCTTCTTCAGATCATCATTATATTGTTGCAGGAGCTGATCAAAAACAAGAAGACAAATCCAAATGGACATGCACTTTGTTTCGTCCAACCTATGACAACTATCATCAATCATTTCGATTCTCTCATGTGTATCTTGGTTCTCATGTTGTGTTGTGGAGATTCCATGCTCCTTATGGAGAATGCTTGCGAGCACAATCATCATATCATACTAAAGATCATCCTTGTGATCTCAACATGGTTATTAACATGGAGTCTTTGATTGCATTACCAAAATTTCTTGCTTTTACAGGTGACAATGGTCTTTATCTTCGTGAAATCAAGAGGGGCAGTAATAATGTTCCATACTTGCAATTTGGATCAAGCTCTGTTGATGATTCCACCATTCGAATGGAGTCCTTCATAA

mRNA sequence

ATGGTGTACCTTCCCAAGTTTGCAGCACTAAAATCTAAGTACAACAACAAGTACTTACGCTATGTGAATGAAAAATCTTCACCAGTCCGTACATTTCTACAATACTCAGGAGACGAAATTCTTACGCCGTTTACGAAGTTCGAGTTTGAAAAAGCTCATTCTGATCCATCTTCGTACCATATAAAATGTTGTTACAACAACAAATATTTGGTTAGTGCTTCTTCTTCAGATCATCATTATATTGTTGCAGGAGCTGATCAAAAACAAGAAGACAAATCCAAATGGACATGCACTTTGTTTCGTCCAACCTATGACAACTATCATCAATCATTTCGATTCTCTCATGTGTATCTTGGTTCTCATGTTGTGTTGTGGAGATTCCATGCTCCTTATGGAGAATGCTTGCGAGCACAATCATCATATCATACTAAAGATCATCCTTGTGATCTCAACATGGTGACAATGGTCTTTATCTTCGTGAAATCAAGAGGGGCAGTAATAATGTTCCATACTTGCAATTTGGATCAAGCTCTGTTGATGATTCCACCATTCGAATGGAGTCCTTCATAA

Coding sequence (CDS)

ATGGTGTACCTTCCCAAGTTTGCAGCACTAAAATCTAAGTACAACAACAAGTACTTACGCTATGTGAATGAAAAATCTTCACCAGTCCGTACATTTCTACAATACTCAGGAGACGAAATTCTTACGCCGTTTACGAAGTTCGAGTTTGAAAAAGCTCATTCTGATCCATCTTCGTACCATATAAAATGTTGTTACAACAACAAATATTTGGTTAGTGCTTCTTCTTCAGATCATCATTATATTGTTGCAGGAGCTGATCAAAAACAAGAAGACAAATCCAAATGGACATGCACTTTGTTTCGTCCAACCTATGACAACTATCATCAATCATTTCGATTCTCTCATGTGTATCTTGGTTCTCATGTTGTGTTGTGGAGATTCCATGCTCCTTATGGAGAATGCTTGCGAGCACAATCATCATATCATACTAAAGATCATCCTTGTGATCTCAACATGGTGACAATGGTCTTTATCTTCGTGAAATCAAGAGGGGCAGTAATAATGTTCCATACTTGCAATTTGGATCAAGCTCTGTTGATGATTCCACCATTCGAATGGAGTCCTTCATAA

Protein sequence

MVYLPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYHIKCCYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTYDNYHQSFRFSHVYLGSHVVLWRFHAPYGECLRAQSSYHTKDHPCDLNMVTMVFIFVKSRGAVIMFHTCNLDQALLMIPPFEWSPS*
BLAST of MELO3C022450 vs. TrEMBL
Match: A0A0A0K956_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080920 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 9.5e-73
Identity = 136/153 (88.89%), Postives = 140/153 (91.50%), Query Frame = 1

Query: 1   MVYLPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYH 60
           MVYLPKFAALKSKYNNKYL YVNEKSS VRTFL+YSGDEILTPFTK EFE+A SDPSSYH
Sbjct: 1   MVYLPKFAALKSKYNNKYLCYVNEKSSTVRTFLRYSGDEILTPFTKLEFEQAQSDPSSYH 60

Query: 61  IKCCYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTYDNYHQSFRFSHVYLGS 120
           IKCCYNNKYLVSASS DHHYIVAGADQKQEDKSKWTCTLFRP YDNYHQSF+FSHV+LGS
Sbjct: 61  IKCCYNNKYLVSASS-DHHYIVAGADQKQEDKSKWTCTLFRPAYDNYHQSFQFSHVFLGS 120

Query: 121 HVVLWRFHAPYGECLRAQSSYHTKDHPCDLNMV 154
           HVVLWR  APYGECLRAQSS  T DH  DLNMV
Sbjct: 121 HVVLWRSTAPYGECLRAQSSDPTTDHLSDLNMV 152

BLAST of MELO3C022450 vs. TrEMBL
Match: D7U3H5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06000 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 8.7e-34
Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 1

Query: 4   LPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYHIKC 63
           LP++  LKSKYN+KYLRY++E    +  FLQ+SG+E++TP++K++ E+A +     HI+C
Sbjct: 3   LPRYVVLKSKYNDKYLRYIHEDVQ-IHGFLQFSGEEVVTPYSKYQVERAKNGKGLVHIRC 62

Query: 64  CYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTY-DNYHQSFRFSHVYLGSHV 123
           CYNNKY V   S +H +IVAGAD+  ED+S W+CTLF P + D   Q+ RF HV LG + 
Sbjct: 63  CYNNKYWV-RWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGNAQTLRFRHVQLGHYA 122

Query: 124 VLWRFHAPYGECLRAQSSYHTKDHPCDL 151
            LWR   PYG CL A S+   KD  CD+
Sbjct: 123 CLWRLPPPYGSCLFAGSASPNKD-LCDV 147

BLAST of MELO3C022450 vs. TrEMBL
Match: F6HZZ6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06090 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.9e-33
Identity = 74/148 (50.00%), Postives = 100/148 (67.57%), Query Frame = 1

Query: 4   LPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYHIKC 63
           LP++  LKSKYNNKYLRY++E    +  FLQ+SG+E++TP++K++ E+A +     HI+C
Sbjct: 3   LPRYVVLKSKYNNKYLRYIHEDVQ-IHGFLQFSGEEVVTPYSKYQVERAKNGGGLVHIRC 62

Query: 64  CYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTY-DNYHQSFRFSHVYLGSHV 123
           CYNNKY V   S +H +IVAGAD+  ED+S W+CTLF P + D   Q+ RF HV LG + 
Sbjct: 63  CYNNKYWV-RWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGDAQTLRFRHVQLGHYA 122

Query: 124 VLWRFHAPYGECLRAQSSYHTKDHPCDL 151
            LWR   PYG CL A S+    D  CD+
Sbjct: 123 CLWRLPPPYGSCLFAGSTSADND-LCDV 147

BLAST of MELO3C022450 vs. TrEMBL
Match: F6HZZ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06110 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.5e-33
Identity = 74/148 (50.00%), Postives = 99/148 (66.89%), Query Frame = 1

Query: 4   LPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYHIKC 63
           LP++  LKSKYNNKYLRY++E    +  FLQ+SG+E++TP++K++ E A +     HI+C
Sbjct: 3   LPRYVVLKSKYNNKYLRYIHEDVQ-IHGFLQFSGEEVVTPYSKYQVEMAKNGKGLVHIRC 62

Query: 64  CYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTY-DNYHQSFRFSHVYLGSHV 123
           CYNNKY V   S +H +IVAGAD+  ED+S W+CTLF P Y D   Q+ +F HV LG + 
Sbjct: 63  CYNNKYWV-RWSKNHWWIVAGADEPDEDQSSWSCTLFEPVYVDGDAQTLQFRHVQLGHYA 122

Query: 124 VLWRFHAPYGECLRAQSSYHTKDHPCDL 151
            LWR   PYG CL A S+    D  CD+
Sbjct: 123 CLWRLPPPYGSCLFAGSTSPDND-LCDV 147

BLAST of MELO3C022450 vs. TrEMBL
Match: A5AYS3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020655 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.3e-33
Identity = 73/143 (51.05%), Postives = 94/143 (65.73%), Query Frame = 1

Query: 4   LPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYHIKC 63
           LP++   KSKYNNK LRY++E    +  FLQ+SG+E++TP++K+  E A +     HI+C
Sbjct: 3   LPRYVVFKSKYNNKXLRYIHEDGE-IHGFLQFSGEEVMTPYSKYHVEMAKNGKGLVHIRC 62

Query: 64  CYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTY-DNYHQSFRFSHVYLGSHV 123
           CYNNKY V   S +H +IVAGAD+  ED+S WTCTLF P Y D   Q+ RF HV LG + 
Sbjct: 63  CYNNKYWV-RWSENHWWIVAGADETDEDQSLWTCTLFEPVYVDGDAQTLRFRHVQLGHYA 122

Query: 124 VLWRFHAPYGECLRAQSSYHTKD 146
            LWR   PYG CL A S+   KD
Sbjct: 123 CLWRLPPPYGSCLFAGSASPDKD 143

BLAST of MELO3C022450 vs. NCBI nr
Match: gi|659120444|ref|XP_008460197.1| (PREDICTED: uncharacterized protein LOC103499082 [Cucumis melo])

HSP 1 Score: 331.6 bits (849), Expect = 8.8e-88
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1

Query: 1   MVYLPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYH 60
           MVYLPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYH
Sbjct: 1   MVYLPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYH 60

Query: 61  IKCCYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTYDNYHQSFRFSHVYLGS 120
           IKCCYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTYDNYHQSFRFSHVYLGS
Sbjct: 61  IKCCYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTYDNYHQSFRFSHVYLGS 120

Query: 121 HVVLWRFHAPYGECLRAQSSYHTKDHPCDLNMV 154
           HVVLWRFHAPYGECLRAQSSYHTKDHPCDLNMV
Sbjct: 121 HVVLWRFHAPYGECLRAQSSYHTKDHPCDLNMV 153

BLAST of MELO3C022450 vs. NCBI nr
Match: gi|449454680|ref|XP_004145082.1| (PREDICTED: uncharacterized protein LOC101206536 [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 1.4e-72
Identity = 136/153 (88.89%), Postives = 140/153 (91.50%), Query Frame = 1

Query: 1   MVYLPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYH 60
           MVYLPKFAALKSKYNNKYL YVNEKSS VRTFL+YSGDEILTPFTK EFE+A SDPSSYH
Sbjct: 1   MVYLPKFAALKSKYNNKYLCYVNEKSSTVRTFLRYSGDEILTPFTKLEFEQAQSDPSSYH 60

Query: 61  IKCCYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTYDNYHQSFRFSHVYLGS 120
           IKCCYNNKYLVSASS DHHYIVAGADQKQEDKSKWTCTLFRP YDNYHQSF+FSHV+LGS
Sbjct: 61  IKCCYNNKYLVSASS-DHHYIVAGADQKQEDKSKWTCTLFRPAYDNYHQSFQFSHVFLGS 120

Query: 121 HVVLWRFHAPYGECLRAQSSYHTKDHPCDLNMV 154
           HVVLWR  APYGECLRAQSS  T DH  DLNMV
Sbjct: 121 HVVLWRSTAPYGECLRAQSSDPTTDHLSDLNMV 152

BLAST of MELO3C022450 vs. NCBI nr
Match: gi|225465417|ref|XP_002264098.1| (PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera])

HSP 1 Score: 151.8 bits (382), Expect = 1.2e-33
Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 1

Query: 4   LPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYHIKC 63
           LP++  LKSKYN+KYLRY++E    +  FLQ+SG+E++TP++K++ E+A +     HI+C
Sbjct: 3   LPRYVVLKSKYNDKYLRYIHEDVQ-IHGFLQFSGEEVVTPYSKYQVERAKNGKGLVHIRC 62

Query: 64  CYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTY-DNYHQSFRFSHVYLGSHV 123
           CYNNKY V   S +H +IVAGAD+  ED+S W+CTLF P + D   Q+ RF HV LG + 
Sbjct: 63  CYNNKYWV-RWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGNAQTLRFRHVQLGHYA 122

Query: 124 VLWRFHAPYGECLRAQSSYHTKDHPCDL 151
            LWR   PYG CL A S+   KD  CD+
Sbjct: 123 CLWRLPPPYGSCLFAGSASPNKD-LCDV 147

BLAST of MELO3C022450 vs. NCBI nr
Match: gi|225465425|ref|XP_002264858.1| (PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera])

HSP 1 Score: 150.6 bits (379), Expect = 2.8e-33
Identity = 74/148 (50.00%), Postives = 100/148 (67.57%), Query Frame = 1

Query: 4   LPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYHIKC 63
           LP++  LKSKYNNKYLRY++E    +  FLQ+SG+E++TP++K++ E+A +     HI+C
Sbjct: 3   LPRYVVLKSKYNNKYLRYIHEDVQ-IHGFLQFSGEEVVTPYSKYQVERAKNGGGLVHIRC 62

Query: 64  CYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTY-DNYHQSFRFSHVYLGSHV 123
           CYNNKY V   S +H +IVAGAD+  ED+S W+CTLF P + D   Q+ RF HV LG + 
Sbjct: 63  CYNNKYWV-RWSKNHWWIVAGADEPDEDQSSWSCTLFEPVHVDGDAQTLRFRHVQLGHYA 122

Query: 124 VLWRFHAPYGECLRAQSSYHTKDHPCDL 151
            LWR   PYG CL A S+    D  CD+
Sbjct: 123 CLWRLPPPYGSCLFAGSTSADND-LCDV 147

BLAST of MELO3C022450 vs. NCBI nr
Match: gi|225465427|ref|XP_002264911.1| (PREDICTED: uncharacterized protein LOC100263724 [Vitis vinifera])

HSP 1 Score: 150.2 bits (378), Expect = 3.6e-33
Identity = 74/148 (50.00%), Postives = 99/148 (66.89%), Query Frame = 1

Query: 4   LPKFAALKSKYNNKYLRYVNEKSSPVRTFLQYSGDEILTPFTKFEFEKAHSDPSSYHIKC 63
           LP++  LKSKYNNKYLRY++E    +  FLQ+SG+E++TP++K++ E A +     HI+C
Sbjct: 3   LPRYVVLKSKYNNKYLRYIHEDVQ-IHGFLQFSGEEVVTPYSKYQVEMAKNGKGLVHIRC 62

Query: 64  CYNNKYLVSASSSDHHYIVAGADQKQEDKSKWTCTLFRPTY-DNYHQSFRFSHVYLGSHV 123
           CYNNKY V   S +H +IVAGAD+  ED+S W+CTLF P Y D   Q+ +F HV LG + 
Sbjct: 63  CYNNKYWV-RWSKNHWWIVAGADEPDEDQSSWSCTLFEPVYVDGDAQTLQFRHVQLGHYA 122

Query: 124 VLWRFHAPYGECLRAQSSYHTKDHPCDL 151
            LWR   PYG CL A S+    D  CD+
Sbjct: 123 CLWRLPPPYGSCLFAGSTSPDND-LCDV 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K956_CUCSA9.5e-7388.89Uncharacterized protein OS=Cucumis sativus GN=Csa_6G080920 PE=4 SV=1[more]
D7U3H5_VITVI8.7e-3450.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06000 PE=4 SV=... [more]
F6HZZ6_VITVI1.9e-3350.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06090 PE=4 SV=... [more]
F6HZZ7_VITVI2.5e-3350.00Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g06110 PE=4 SV=... [more]
A5AYS3_VITVI3.3e-3351.05Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_020655 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659120444|ref|XP_008460197.1|8.8e-88100.00PREDICTED: uncharacterized protein LOC103499082 [Cucumis melo][more]
gi|449454680|ref|XP_004145082.1|1.4e-7288.89PREDICTED: uncharacterized protein LOC101206536 [Cucumis sativus][more]
gi|225465417|ref|XP_002264098.1|1.2e-3350.00PREDICTED: uncharacterized protein LOC100256767 [Vitis vinifera][more]
gi|225465425|ref|XP_002264858.1|2.8e-3350.00PREDICTED: uncharacterized protein LOC100241465 [Vitis vinifera][more]
gi|225465427|ref|XP_002264911.1|3.6e-3350.00PREDICTED: uncharacterized protein LOC100263724 [Vitis vinifera][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008998Agglutinin
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009405 pathogenesis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022450T1MELO3C022450T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008998Agglutinin domainPFAMPF07468Agglutinincoord: 4..140
score: 2.7
IPR008998Agglutinin domainSMARTSM00791agglutinincoord: 2..154
score: 1.
IPR008998Agglutinin domainunknownSSF50382Agglutinincoord: 3..146
score: 2.62
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 3..146
score: 1.4
NoneNo IPR availablePANTHERPTHR39244FAMILY NOT NAMEDcoord: 1..139
score: 1.8
NoneNo IPR availablePANTHERPTHR39244:SF1SUBFAMILY NOT NAMEDcoord: 1..139
score: 1.8