MELO3C022421.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C022421.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionABC transporter F family-like protein
Locationchr11 : 33583144 .. 33587636 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTCTTGGTGGACTTGTTTTACCAAGGATATGCAGGCACGACTCACCCATTCGTTTAGTGGTGGATGGAGGATGAGAATTTCATTGGCTCGGGCTCTTTTTGTTCAACCAATCATTTACATCTCAGCGCTGTTCTTTGGTTGGAGGAGTATTTCCGTCGGTGGAAGAAAACTCTCGTTGTCGTGTCACACGATCGAGATTTCCTCAGCACTGATTGCAACGAGATTATTCACTTCATGACTTTTTGCTTCATTTTTATCGTGGAAATTTCGATGATTTCGAAAGTGGGTACGAGCAACGTGGGAAAGAAATGAACAAGAAGTTTGAGATATATGATAAGGAGGTAGAAGCTGCTAAGAGAGATCTGGAAGCAGAGCTCAACAAGAGAAGGTGAAAGACCGAGCAAAGTTTGCTGCTCTGCTAAGGAAGCCTAAAAAAACAAGTCGAAGGTAAAGGTTGATGAGGACGATCCCTTACCCGAGGCCCCCAGAAAATGGAGAGATTACAGTATAGAGTTCCACTTCCCTGAACCCACAGAGCTCACCCCACCATTATTACAATTGATTGAATTCAATTTCAGTTATCCAAATAGGAAAGGTTTTAGACTTTCTGAAGTCGATGTAGGCATTGACATGGGAACACGTGTTGCTATTGTCGGACCGAATGGAGCAGGAAAATCAACTCTTTTGAATCTGCTAGCAGGTGATCTCGTTCCAACTTCCAACAGAAGGGGAAGTACGCAGGAGTCAAAAGTTGAGAATTGGGAGGTAGTCGCAACATTTTGTAGACCTTCTATCAATGGAGGAAACACCAGTTCAGTGTCTTCTTCGTCTTTATCCCGATCAAGACGGTCTAAGCAAACAGGAAGCTGTTCGTGCTAAGTTAGGCAAATTCGGACTCCCTAGTCACAATATCACCTCACCCAAATTGCTAAATTATCTGGAGGACGGAAAGCCACAGTTGTTTTTACATCAATTCCCATGTCAAAGCCTCACATATTACTGCTTGATGAACCTACAAATCACTTAGATGTGCAACGTACTGATGCATTAGCAGATGCCTTAGATGAATTCAGTGGTGGAGTCGTTTGGTTAGCCATGATTCAAGACTCATATCAAGTGTGTGTGAGGATGAAGAAAAAAGTGAAATTTGGGTGGGTTGAAAACTTGAAATGGTAGCGTAGAATCATTCCTCGGAACTTTTGCGAAATACAAGGAAAAACTACAAATGGAGATTAAAGCTGAGGTTGATGATTAGAAGAAGATTTGAAGCATTCTCAAAGGAAGGTGCCAAATTTTCAAGTAATACTAAAACCTTTCTACTTAAATCTTTTTTGGTCTTTTAGCACTAATTTTATTACCTCATAACTGTTATAAAAGTTTCCATTCACCATTCACTCTATTGTTACTCCGGCGAGTTTAATGATGTGTTTGAGGGTGATTTAGGTAGAATAATTCGAAGTTTTGAAATGGATATAAGTAATTATAAAAAAAAATGTTATCCTTTTTTGGGTTTGACAAAAGATATTTGAATTAAATTTGGCTTTTGATCTTGGTAGAGTTTTTAATTAATATTTAATTTTCAAATTTATCCCTTAAATCTTAGATTCATTTTATATATGTCTATCTATTACTCACCTAATCAAGTCTTTCTTCTCATTTTTATAAGTGGAATGAATCAATTTTTTTTTATAAATGTATTCCATATTAACTTCTTTTTAAAAATAGTAATTAATTCTCTTACCATTTGAAAATTGATCTATAACAAACATAACATATCTTTTTAAACTATTATTTAAAATTTAAAATTATCAAAAAAAAAAACTCATTACATTGTATTTGAAAATGCTAAAGAAAATCTATATTAATCTTTTTATTTATTTACCGAATATTATAACCTATTGTTTTAAGTTAAAATTTGTTATTTTAATTTAACATTAGAAAGACGATTCATCCTTGAAGCAATTTATAAGGAGAGTCGTTATGGATGACATAAAATAATTAAACTTTCAAACTATGATTTTTTTTTAATTCTATGGATTTTGTATATCGTAAATAGTTTAAATATTTTACTATTTTTTAAAATATTTTATTTTGAAATCTATTTTTTAGAAAAAGTGACCGTAATTTTAAAATTATAATTAGAAAAACATACGTTTTTAGGTGTTCAGCAGGTATCCAATAGAACAATGCCACGTATGCCGTAAAACGTGGCGGCGTCCAATAATAGTCTGACTGTGACGCAAAATCCGGGAACCATATCAATGCGAGCCATTAAGGCGAACTATTTAATCCCCAAATTTGCAAATCGAAGAATCAAAGTCAACATTCAATCTCTTTCGATCAGAGTGGTGACCGGAGAGAAGACTAGCCGGCCGGCCAGGAGGAGGATCGATTCGCTGCAATTCTTCTTCATCTCTCCGGCTACCCAATTTCTTACGAAATCATGGTAATTTTCCTTCTCAAATTGTAATTGTGATGGATTATTGTTCTAGGTTCTAGATCTCCTATTCGTGTTATTCGTCTTTATCTAGAGTTGGATCTTGTAATTATCTAGATTAGCACTTGTTGATTTTGGATCCTTTTTCTGTTTTCTTTGCCGAGGATTCAATCTGAATCTGTTCTGTTTCCCCTTTATAGGGTTTTTTTTCTTCTTCTCCGGTTTGGCTTTTGGTTAATTGCCTAAGGTTGAATCTCACTACCGGAATTAAGTGGTTAAAATGTTTGTATCTTGGTCTTTAGACATTGTATTATGTGAGTAATTTGGATTGCCCAAGTCTCTTGATTCGAAAGGCTCTTTAGTTCGCCTAGATCTCCAGATGAAACCTACCGGAGAAGATTGAGCAAAACGTTGTTTACAAGCGGGAACATTTTTTATAGTGAAGAGAAATATTCGGCATTCGAATGGTTGAATATTGTTTCCTTGTTTGAATTTAAGTTGTGGGAAAAGGAAATCACGCTTGGCCGCTAATCTAAGTTGAGGATTGTTTTCACATGTTTCACTTTTTAAATTTAGATCATGTTAAACTGAGATTTTTGGTTGGAAAATGGCAAGGGCATTATTTTTAAGGTAGAAAATCTTGAGCTTCGTGATGATATCGTTTGGTTTTGAATTCTTAGTGTTACTCAAATGAGACTATATATTATATTTAATCTCGATATCTTGAGCTGCCTTTCTGAACAATAGTTGATGAACCTAACCTTTTGTAGACAACATCAAGGCGTCTTGCGGACCGAAAGGTGGGGAAGTTTGAGAGGAATATCACAAAGAGGGGGTCTGTTCCAGAGACCTCCGTTAAGAAGGGGAAGGAGTATCCTGTTGGGCCCCTGCTGCTTGGATTCTTCATATTTGTTGTCATCGGATCATGTAAGTCTAATCCTTTGTAGTATCTATATCATTTTAGTTTTTGCTTTATCTGATAGATAATTGTTGTGGCTAACCAAGTAAAGTATACAAGTCTTAGTTCTAGGTAAAGCATGGAACCAAGGACACAAGATAGTATATACTATATAATAAAAATAAGTTCTCTTTATATATTTTCACTTAGGCCATATATACAAAGTTAGAGTAGACCTTTATCCCCACTCATTCAATTTATTGATGGTGCATTCGGTAAGCTTTGTCGGTATCCATCTCTTGAGCCGACAAAAATGTCGATCTTTCTCCCAACTCTCATGTGATTCATCTTTCTCCTCGTCTCTTCTGCACATATTATGCTTTTAAGTGCAATCTTGTTCCTCAGCGTAGCTTCCTAAATCTGGGTAGATCCTTTACTTACATTTTAGGTGGTTTAAACCTCGTCGTGTTAGAACAACCTTCATTACTTGTTTTACTATGGCTATACACTGTTAACAATAATCACCGGATTTCAATTTGAATATCTTATTAGGATACAACCTAGCAACAATATATGATAGCCACATTTGAGAAGGGTTACTTTCCCTCAAATTCCCACCATGAAAATTCTTACCAAAATGATTCATCCCAAGTCCCCAACACACTTTACTTATATAACCAATGCCCTTTTATGCCCTTACTATTATCGTATCTCTAATTAGATTTGGGACTCTCACGATCCTAACAACGTGCGAACTTGCTGTGTCTTTAGAGTCTCTATTGTATCCAAAGAATCACACACACACACACACACACACACACACACACACACACACACACACATATATATATATATATTTTTTCTGATCTTTGTTTATTCAACAGCTCTCTTCCAGATAATCAGGACAGCAACAGGCGGAGGCATGGCTTGATTTGATTTGATACGATATATAATCCTCTGATTTTGAGATATGATGGTGTTATTATTACACATTACGTTGTGTCTTCTCTTTTCTAAGGCAGAAAGATGAACACAAAGGAAATGTTTTTATTATTTTTTTTTATTTTTCGCTTTTAAATGGAATTGATTCCGCAGTTGTTCCTTCTTCTTGTGGGAGATTTCAAGATTTTTGACAATAGTATTGTTACCCTTTCTCT

mRNA sequence

ATTCTTGGTGGACTTGTTTTACCAAGGATATGCAGGCACGACTCACCCATTCGTTTAGTGGTGGATGGAGGATGAGAATTTCATTGGCTCGGGCTCTTTTTGTTCAACCAATCATTTACATCTCAGCGCTGTTCTTTGGTTGGAGGAGTATTTCCGTCGGTGGAAGAAAACTCTCGTTGTCGTGTCACACGATCGAGATTTCCTCAGCACTGATTGCAACGAGATTATTCACTTCATGACTTTTTGCTTCATTTTTATCGTGGAAATTTCGATGATTTCGAAAGTGGGTACGAGCAACGTGGGAAAGAAATGAACAAGAAGTTTGAGATATATGATAAGGAGGTAGAAGCTGCTAAGAGAGATCTGGAAGCAGAGCTCAACAAGAGAAGGTGAAAGACCGAGCAAAGTTTGCTGCTCTGCTAAGGAAGCCTAAAAAAACAAGTCGAAGGTAAAGGTTGATGAGGACGATCCCTTACCCGAGGCCCCCAGAAAATGGAGAGATTACAGTATAGAGTTCCACTTCCCTGAACCCACAGAGCTCACCCCACCATTATTACAATTGATTGAATTCAATTTCAGTTATCCAAATAGGAAAGGTTTTAGACTTTCTGAAGTCGATGTAGGCATTGACATGGGAACACGTGTTGCTATTGTCGGACCGAATGGAGCAGGAAAATCAACTCTTTTGAATCTGCTAGCAGGTGATCTCGTTCCAACTTCCAACAGAAGGGGAAGTACGCAGGAGTCAAAAGTTGAGAATTGGGAGGTAGTCGCAACATTTTGTAGACCTTCTATCAATGGAGGAAACACCAGTTCAGTGTCTTCTTCGTCTTTATCCCGATCAAGACGGTCTAAGCAAACAGGAAGCTGTTCGTGCTAAGTTAGGCAAATTCGGACTCCCTAGTCACAATATCACCTCACCCAAATTGCTAAATTATCTGGAGGACGGAAAGCCACAGTTGTTTTTACATCAATTCCCATGTCAAAGCCTCACATATTACTGCTTGATGAACCTACAAATCACTTAGATGTGCAACGTACTGATGCATTAGCAGATGCCTTAGATGAATTCAGTGGTGGAGTCGTTTGGTTAGCCATGATTCAAGACTCATATCAAGTGTGTGTGAGGATGAAGAAAAAAGTGAAATTTGGGTGGGTTGAAAACTTGAAATGGTAGCGTAGAATCATTCCTCGGAACTTTTGCGAAATACAAGGAAAAACTACAAATGGAGATTAAAGCTGAGGTTGATGATTAGAAGAAGATTTGAAGCATTCTCAAAGGAAGGTGCCAAATTTTCAAGTGTTCAGCAGGTATCCAATAGAACAATGCCACGTATGCCGTAAAACGTGGCGGCGTCCAATAATAGTCTGACTGTGACGCAAAATCCGGGAACCATATCAATGCGAGCCATTAAGGCGAACTATTTAATCCCCAAATTTGCAAATCGAAGAATCAAAGTCAACATTCAATCTCTTTCGATCAGAGTGGTGACCGGAGAGAAGACTAGCCGGCCGGCCAGGAGGAGGATCGATTCGCTGCAATTCTTCTTCATCTCTCCGGCTACCCAATTTCTTACGAAATCATGACAACATCAAGGCGTCTTGCGGACCGAAAGGTGGGGAAGTTTGAGAGGAATATCACAAAGAGGGGGTCTGTTCCAGAGACCTCCGTTAAGAAGGGGAAGGAGTATCCTGTTGGGCCCCTGCTGCTTGGATTCTTCATATTTGTTGTCATCGGATCATCTCTCTTCCAGATAATCAGGACAGCAACAGGCGGAGGCATGGCTTGATTTGATTTGATACGATATATAATCCTCTGATTTTGAGATATGATGGTGTTATTATTACACATTACGTTGTGTCTTCTCTTTTCTAAGGCAGAAAGATGAACACAAAGGAAATGTTTTTATTATTTTTTTTTATTTTTCGCTTTTAAATGGAATTGATTCCGCAGTTGTTCCTTCTTCTTGTGGGAGATTTCAAGATTTTTGACAATAGTATTGTTACCCTTTCTCT

Coding sequence (CDS)

ATGGAGGATGAGAATTTCATTGGCTCGGGCTCTTTTTGTTCAACCAATCATTTACATCTCAGCGCTGTTCTTTGGTTGGAGGAGTATTTCCGTCGGTGGAAGAAAACTCTCGTTGTCGTGTCACACGATCGAGATTTCCTCAGCACTGATTGCAACGAGATTATTCACTTCATGACTTTTTGCTTCATTTTTATCGTGGAAATTTCGATGATTTCGAAAGTGGGTACGAGCAACGTGGGAAAGAAATGA

Protein sequence

MEDENFIGSGSFCSTNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIHFMTFCFIFIVEISMISKVGTSNVGKK
Homology
[Close]
BLAST of MELO3C022421.2 vs. NCBI nr
Match: RAL49040.1 (hypothetical protein DM860_001360 [Cuscuta australis])

HSP 1 Score: 81.3 bits (199), Expect = 1.7e-12
Identity = 37/46 (80.43%), Postives = 39/46 (84.78%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIHFMTF 61
           TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL++ CNEIIHF  F
Sbjct: 333 TNHLDLRAVLWLEEYLSRWKKTLVVVSHDRDFLNSVCNEIIHFHEF 378

[Close]
BLAST of MELO3C022421.2 vs. NCBI nr
Match: XP_022874592.1 (ABC transporter F family member 4 [Olea europaea var. sylvestris])

HSP 1 Score: 79.7 bits (195), Expect = 5.0e-12
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL+T CNEIIH
Sbjct: 350 TNHLDLRAVLWLEEYLTRWKKTLVVVSHDRDFLNTVCNEIIH 391

[Close]
BLAST of MELO3C022421.2 vs. NCBI nr
Match: XP_007221905.1 (ABC transporter F family member 4 [Prunus persica] >XP_020421506.1 ABC transporter F family member 4 [Prunus persica] >ONI29515.1 hypothetical protein PRUPE_1G200300 [Prunus persica])

HSP 1 Score: 79.0 bits (193), Expect = 8.6e-12
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL+T CNEIIH
Sbjct: 342 TNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIH 383

[Close]
BLAST of MELO3C022421.2 vs. NCBI nr
Match: XP_012840796.1 (PREDICTED: ABC transporter F family member 4 [Erythranthe guttata] >EYU34546.1 hypothetical protein MIMGU_mgv1a002113mg [Erythranthe guttata])

HSP 1 Score: 79.0 bits (193), Expect = 8.6e-12
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL+T CNEIIH
Sbjct: 336 TNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIH 377

[Close]
BLAST of MELO3C022421.2 vs. NCBI nr
Match: XP_012093127.1 (ABC transporter F family member 4 [Jatropha curcas] >KDP44499.1 hypothetical protein JCGZ_16332 [Jatropha curcas])

HSP 1 Score: 79.0 bits (193), Expect = 8.6e-12
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL+T CNEIIH
Sbjct: 352 TNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIH 393

[Close]
BLAST of MELO3C022421.2 vs. TAIR10
Match: AT3G54540.1 (general control non-repressible 4)

HSP 1 Score: 76.6 bits (187), Expect = 7.7e-15
Identity = 35/42 (83.33%), Postives = 36/42 (85.71%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL+T C EIIH
Sbjct: 347 TNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIH 388

[Close]
BLAST of MELO3C022421.2 vs. TAIR10
Match: AT1G64550.1 (general control non-repressible 3)

HSP 1 Score: 60.1 bits (144), Expect = 7.5e-10
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L AVLWLE Y  +W KT +VVSH R+FL+T   +IIH
Sbjct: 367 TNHLDLHAVLWLETYLTKWPKTFIVVSHAREFLNTVVTDIIH 408

[Close]
BLAST of MELO3C022421.2 vs. TAIR10
Match: AT5G60790.1 (ABC transporter family protein)

HSP 1 Score: 52.4 bits (124), Expect = 1.6e-07
Identity = 23/45 (51.11%), Postives = 30/45 (66.67%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIHFMT 60
           TNHL L A +WLEE  + + + LVVVSH +DFL+  C  IIH  +
Sbjct: 240 TNHLDLEACVWLEESLKNFDRILVVVSHSQDFLNGVCTNIIHMQS 284

[Close]
BLAST of MELO3C022421.2 vs. TAIR10
Match: AT5G64840.1 (general control non-repressible 5)

HSP 1 Score: 45.1 bits (105), Expect = 2.5e-05
Identity = 18/41 (43.90%), Postives = 26/41 (63.41%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEII 56
           TNHL L  + WLE Y ++    +V++SHDR FL   C +I+
Sbjct: 287 TNHLDLDTIEWLEGYLQKQDVPMVIISHDRAFLDQLCTKIV 327

[Close]
BLAST of MELO3C022421.2 vs. TAIR10
Match: AT5G09930.1 (ABC transporter family protein)

HSP 1 Score: 43.5 bits (101), Expect = 7.3e-05
Identity = 18/41 (43.90%), Postives = 25/41 (60.98%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEII 56
           TNHL L  + WLE Y  +    +V++SHDR FL   C +I+
Sbjct: 273 TNHLDLDTIEWLEGYLIKQDVPMVIISHDRAFLDQLCTKIV 313

[Close]
BLAST of MELO3C022421.2 vs. Swiss-Prot
Match: sp|Q9M1H3|AB4F_ARATH (ABC transporter F family member 4 OS=Arabidopsis thaliana OX=3702 GN=ABCF4 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.4e-13
Identity = 35/42 (83.33%), Postives = 36/42 (85.71%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL+T C EIIH
Sbjct: 347 TNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCTEIIH 388

[Close]
BLAST of MELO3C022421.2 vs. Swiss-Prot
Match: sp|Q6P542|ABCF1_MOUSE (ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.1e-09
Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIHFMT 60
           TNHL L+AV+WL  Y + W+KTL++VSHD+ FL   C +IIH  T
Sbjct: 471 TNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDT 515

[Close]
BLAST of MELO3C022421.2 vs. Swiss-Prot
Match: sp|Q6MG08|ABCF1_RAT (ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.1e-09
Identity = 25/45 (55.56%), Postives = 33/45 (73.33%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIHFMT 60
           TNHL L+AV+WL  Y + W+KTL++VSHD+ FL   C +IIH  T
Sbjct: 473 TNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIHLDT 517

[Close]
BLAST of MELO3C022421.2 vs. Swiss-Prot
Match: sp|Q8NE71|ABCF1_HUMAN (ATP-binding cassette sub-family F member 1 OS=Homo sapiens OX=9606 GN=ABCF1 PE=1 SV=2)

HSP 1 Score: 60.8 bits (146), Expect = 7.9e-09
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L+AV+WL  Y + W+KTL++VSHD+ FL   C +IIH
Sbjct: 479 TNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIH 520

[Close]
BLAST of MELO3C022421.2 vs. Swiss-Prot
Match: sp|Q7YR37|ABCF1_PANTR (ATP-binding cassette sub-family F member 1 OS=Pan troglodytes OX=9598 GN=ABCF1 PE=3 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.9e-09
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L+AV+WL  Y + W+KTL++VSHD+ FL   C +IIH
Sbjct: 441 TNHLDLNAVIWLNNYLQGWRKTLLIVSHDQGFLDDVCTDIIH 482

[Close]
BLAST of MELO3C022421.2 vs. TrEMBL
Match: tr|A0A2I4FMJ1|A0A2I4FMJ1_9ROSI (ABC transporter F family member 4 OS=Juglans regia OX=51240 GN=LOC109000441 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-12
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL+T CNEIIH
Sbjct: 360 TNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIH 401

[Close]
BLAST of MELO3C022421.2 vs. TrEMBL
Match: tr|M5XAY4|M5XAY4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G200300 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-12
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL+T CNEIIH
Sbjct: 342 TNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIH 383

[Close]
BLAST of MELO3C022421.2 vs. TrEMBL
Match: tr|A0A2I0WB38|A0A2I0WB38_9ASPA (ABC transporter F family member 4 OS=Dendrobium catenatum OX=906689 GN=ABCF4 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-12
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL+T CNEIIH
Sbjct: 330 TNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIH 371

[Close]
BLAST of MELO3C022421.2 vs. TrEMBL
Match: tr|A0A2J6LEA1|A0A2J6LEA1_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_3X33421 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-12
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 15  TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
           TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL+T CNEIIH
Sbjct: 350 TNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIH 391

[Close]
BLAST of MELO3C022421.2 vs. TrEMBL
Match: tr|A0A2J6LWR3|A0A2J6LWR3_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_0X441 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 5.7e-12
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0 

Query: 15 TNHLHLSAVLWLEEYFRRWKKTLVVVSHDRDFLSTDCNEIIH 57
          TNHL L AVLWLEEY  RWKKTLVVVSHDRDFL+T CNEIIH
Sbjct: 58 TNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIH 99

The following BLAST results are available for this feature:
BLAST of MELO3C022421.2 vs. NCBI nr
Match NameE-valueIdentityDescription
RAL49040.11.7e-1280.43hypothetical protein DM860_001360 [Cuscuta australis][more]
XP_022874592.15.0e-1285.71ABC transporter F family member 4 [Olea europaea var. sylvestris][more]
XP_007221905.18.6e-1285.71ABC transporter F family member 4 [Prunus persica] >XP_020421506.1 ABC transport... [more]
XP_012840796.18.6e-1285.71PREDICTED: ABC transporter F family member 4 [Erythranthe guttata] >EYU34546.1 h... [more]
XP_012093127.18.6e-1285.71ABC transporter F family member 4 [Jatropha curcas] >KDP44499.1 hypothetical pro... [more]
BLAST of MELO3C022421.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G54540.17.7e-1583.33general control non-repressible 4[more]
AT1G64550.17.5e-1061.90general control non-repressible 3[more]
AT5G60790.11.6e-0751.11ABC transporter family protein[more]
AT5G64840.12.5e-0543.90general control non-repressible 5[more]
AT5G09930.17.3e-0543.90ABC transporter family protein[more]
BLAST of MELO3C022421.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M1H3|AB4F_ARATH1.4e-1383.33ABC transporter F family member 4 OS=Arabidopsis thaliana OX=3702 GN=ABCF4 PE=2 ... [more]
sp|Q6P542|ABCF1_MOUSE6.1e-0955.56ATP-binding cassette sub-family F member 1 OS=Mus musculus OX=10090 GN=Abcf1 PE=... [more]
sp|Q6MG08|ABCF1_RAT6.1e-0955.56ATP-binding cassette sub-family F member 1 OS=Rattus norvegicus OX=10116 GN=Abcf... [more]
sp|Q8NE71|ABCF1_HUMAN7.9e-0957.14ATP-binding cassette sub-family F member 1 OS=Homo sapiens OX=9606 GN=ABCF1 PE=1... [more]
sp|Q7YR37|ABCF1_PANTR7.9e-0957.14ATP-binding cassette sub-family F member 1 OS=Pan troglodytes OX=9598 GN=ABCF1 P... [more]
BLAST of MELO3C022421.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2I4FMJ1|A0A2I4FMJ1_9ROSI5.7e-1285.71ABC transporter F family member 4 OS=Juglans regia OX=51240 GN=LOC109000441 PE=4... [more]
tr|M5XAY4|M5XAY4_PRUPE5.7e-1285.71Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G200300 PE=4 SV=1[more]
tr|A0A2I0WB38|A0A2I0WB38_9ASPA5.7e-1285.71ABC transporter F family member 4 OS=Dendrobium catenatum OX=906689 GN=ABCF4 PE=... [more]
tr|A0A2J6LEA1|A0A2J6LEA1_LACSA5.7e-1285.71Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_3X33421 PE=4 SV=1[more]
tr|A0A2J6LWR3|A0A2J6LWR3_LACSA5.7e-1285.71Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_0X441 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016887 ATPase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C022421.2.1MELO3C022421.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 14..62
e-value: 4.8E-8
score: 34.5
NoneNo IPR availablePANTHERPTHR19211:SF14ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 1coord: 15..57
NoneNo IPR availablePANTHERPTHR19211ATP-BINDING TRANSPORT PROTEIN-RELATEDcoord: 15..57
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..56

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C022421.2Cla97C06G110410Watermelon (97103) v2medwmbB118
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C022421.2Cucumber (Gy14) v2cgybmedB381
MELO3C022421.2Cucumber (Gy14) v1cgymedB565
MELO3C022421.2Cucurbita maxima (Rimu)cmamedB918
MELO3C022421.2Cucurbita pepo (Zucchini)cpemedB336
MELO3C022421.2Wild cucumber (PI 183967)cpimedB431
MELO3C022421.2Cucumber (Chinese Long) v2cumedB422
MELO3C022421.2Bottle gourd (USVL1VR-Ls)lsimedB019
MELO3C022421.2Watermelon (Charleston Gray)medwcgB119
MELO3C022421.2Watermelon (97103) v1medwmB138
MELO3C022421.2Cucumber (Chinese Long) v3cucmedB435