MELO3C022191 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C022191
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Protein of Unknown Function (DUF239)
Location	chr9 : 360242 .. 360595 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCATACGACCTGGTTGCTCAAGTGAGAGTAGGACTAGTTCAAGCAGATCCAAGAAGAAGCGTGTAGACCAGACGGCTAATACTGTGGAAATCATTCGCAATACAATGGAATATGCGAATAACCAGTTGAAGGTCATTGCAGAAGGACCGAATTTACAACGTCAAGATGAGCGCGCCTCCCGTGCAGAAGTCGTGAGACAGTTGCAGGAAGTCCCTGAACTGAGTACCCGTGATAGGGTGCGCCTTATGTGGAAGATAATGCGCAATATTGACGACATGAAAGCATTCTTGGAGGTACCCAACGAGCTTAAATTGGACTACTGCATGGGTATACTAAAAGATAATGCTTGA

mRNA sequence

ATGAGCATACGACCTGGTTGCTCAAGTGAGAGTAGGACTAGTTCAAGCAGATCCAAGAAGAAGCGTGTAGACCAGACGGCTAATACTGTGGAAATCATTCGCAATACAATGGAATATGCGAATAACCAGTTGAAGGTCATTGCAGAAGGACCGAATTTACAACGTCAAGATGAGCGCGCCTCCCGTGCAGAAGTCGTGAGACAGTTGCAGGAAGTCCCTGAACTGAGTACCCGTGATAGGGTGCGCCTTATGTGGAAGATAATGCGCAATATTGACGACATGAAAGCATTCTTGGAGGTACCCAACGAGCTTAAATTGGACTACTGCATGGGTATACTAAAAGATAATGCTTGA

Coding sequence (CDS)

ATGAGCATACGACCTGGTTGCTCAAGTGAGAGTAGGACTAGTTCAAGCAGATCCAAGAAGAAGCGTGTAGACCAGACGGCTAATACTGTGGAAATCATTCGCAATACAATGGAATATGCGAATAACCAGTTGAAGGTCATTGCAGAAGGACCGAATTTACAACGTCAAGATGAGCGCGCCTCCCGTGCAGAAGTCGTGAGACAGTTGCAGGAAGTCCCTGAACTGAGTACCCGTGATAGGGTGCGCCTTATGTGGAAGATAATGCGCAATATTGACGACATGAAAGCATTCTTGGAGGTACCCAACGAGCTTAAATTGGACTACTGCATGGGTATACTAAAAGATAATGCTTGA

Protein sequence

MSIRPGCSSESRTSSSRSKKKRVDQTANTVEIIRNTMEYANNQLKVIAEGPNLQRQDERASRAEVVRQLQEVPELSTRDRVRLMWKIMRNIDDMKAFLEVPNELKLDYCMGILKDNA*

Homology

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BLAST of MELO3C022191 vs. TrEMBL
Match: A0A0A0LEB9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G643760 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-25
Identity = 61/104 (58.65%), Postives = 79/104 (75.96%), Query Frame = 1


Query: 14  SSSRSKKKRVDQTANTVEIIRNTMEYANNQLKVIAEGPNLQRQDERASRAEVVRQLQEVP 73
           +SSRSK+KR  QTA T++IIRNTM+Y N+Q + I E P++Q Q + A  AEV++QLQ +P
Sbjct: 3   ASSRSKRKRGGQTAETMKIIRNTMKYVNDQSEAIVEWPSVQHQSKDAFYAEVMKQLQAIP 62

Query: 74  ELSTRDRVRLMWKIMRNIDDMKAFLEVPNELKLDYCMGILKDNA 118
           ELST DR  LMW +M N+ DMKA  E+ NELKLDYC  +L+DNA
Sbjct: 63  ELSTHDRRCLMWTLMCNVHDMKALWEISNELKLDYCTVMLEDNA 106

[Close]

BLAST of MELO3C022191 vs. TrEMBL
Match: E5GCB5_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-22
Identity = 59/116 (50.86%), Postives = 76/116 (65.52%), Query Frame = 1


Query: 1   MSIRPGCSSESRTSSSRSKKKRVDQTANTVEIIRNTMEYANNQLKVIAEGPNLQRQDERA 60
           M  R    SE R  SS SK+KR     ++ +I+R  +EY N QL  IAE P LQRQD   
Sbjct: 541 METRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQ 600

Query: 61  SRAEVVRQLQEVPELSTRDRVRLMWKIMRNIDDMKAFLEVPNELKLDYCMGILKDN 117
           +R E+VR L+ +PEL+  DR RLM  +MRN+DDMKAFLEVP+ +K  YC  IL++N
Sbjct: 601 TRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQEN 656

[Close]

BLAST of MELO3C022191 vs. TrEMBL
Match: A0A0A0KFW0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G116150 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.2e-17
Identity = 52/109 (47.71%), Postives = 68/109 (62.39%), Query Frame = 1


Query: 8   SSESRTSSSRSKKKRVDQTANTVEIIRNTMEYANNQLKVIAEGPNLQRQDERASRAEVVR 67
           SSE R  SS SK+K   Q    V++I N ME  N+QLK IA     +R  E     EVV+
Sbjct: 19  SSEGRNCSSGSKRKHGGQHYEAVDVISNEMEVRNDQLKAIANWSKEKRATEVELHVEVVK 78

Query: 68  QLQEVPELSTRDRVRLMWKIMRNIDDMKAFLEVPNELKLDYCMGILKDN 117
           QLQ++ EL TRDRV+LM  I   +DD++ FL  P +LKL+YC  +L+DN
Sbjct: 79  QLQDISELRTRDRVKLMQIIFHMVDDIEGFLSCPTKLKLEYCRVLLEDN 127

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BLAST of MELO3C022191 vs. TrEMBL
Match: E5GBB2_CUCME (Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 8.4e-11
Identity = 40/112 (35.71%), Postives = 64/112 (57.14%), Query Frame = 1


Query: 4   RPGCSSESRTSSSRSKKKRVDQTANTVEIIRNTMEYANNQLKVIAEGPNLQRQDERASRA 63
           RP  +SE +T SS SK+KR  Q    VE I   ++  N QL+ IAE P     ++   R 
Sbjct: 509 RPSRASEGKTGSSGSKRKRGSQRDFDVEAIHLALDQTNEQLRQIAEWPARNLANDNHVRT 568

Query: 64  EVVRQLQEVPELSTRDRVRLMWKIMRNIDDMKAFLEVPNELKLDYCMGILKD 116
           E  R L+E+PEL++ DR  L   ++  +DD++ F+ +P + +  +C  +L+D
Sbjct: 569 EFFRILREMPELTSLDRALLQRHLLSRMDDLRGFVLMPEDEREGFCRVLLRD 620

[Close]

BLAST of MELO3C022191 vs. TrEMBL
Match: E5GBB1_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.4e-10
Identity = 37/95 (38.95%), Postives = 59/95 (62.11%), Query Frame = 1


Query: 3   IRPGCSSESRTSSSRSKKKRVDQTANTVEIIRNTMEYANNQLKVIAEGPNLQRQDERASR 62
           IR   +SE R  SS SK+K+  +    VE+I++ ME+ N+QLK   +    +   E    
Sbjct: 34  IRADQASERRNCSSGSKRKQGSEHYEMVEVIKSAMEFGNDQLKAFEDWSKDKHSTEVELH 93

Query: 63  AEVVRQLQEVPELSTRDRVRLMWKIMRNIDDMKAF 98
           AEVV+QLQ++PEL +RDR +LM  + R+++ ++ F
Sbjct: 94  AEVVKQLQDIPELRSRDRAKLMQILFRSVEAIEGF 128

[Close]

BLAST of MELO3C022191 vs. NCBI nr
Match: gi|700203303|gb|KGN58436.1| (hypothetical protein Csa_3G643760 [Cucumis sativus])

HSP 1 Score: 122.9 bits (307), Expect = 3.8e-25
Identity = 61/104 (58.65%), Postives = 79/104 (75.96%), Query Frame = 1


Query: 14  SSSRSKKKRVDQTANTVEIIRNTMEYANNQLKVIAEGPNLQRQDERASRAEVVRQLQEVP 73
           +SSRSK+KR  QTA T++IIRNTM+Y N+Q + I E P++Q Q + A  AEV++QLQ +P
Sbjct: 3   ASSRSKRKRGGQTAETMKIIRNTMKYVNDQSEAIVEWPSVQHQSKDAFYAEVMKQLQAIP 62

Query: 74  ELSTRDRVRLMWKIMRNIDDMKAFLEVPNELKLDYCMGILKDNA 118
           ELST DR  LMW +M N+ DMKA  E+ NELKLDYC  +L+DNA
Sbjct: 63  ELSTHDRRCLMWTLMCNVHDMKALWEISNELKLDYCTVMLEDNA 106

[Close]

BLAST of MELO3C022191 vs. NCBI nr
Match: gi|659133698|ref|XP_008466863.1| (PREDICTED: uncharacterized protein LOC103504172 [Cucumis melo])

HSP 1 Score: 113.6 bits (283), Expect = 2.3e-22
Identity = 61/116 (52.59%), Postives = 76/116 (65.52%), Query Frame = 1


Query: 1   MSIRPGCSSESRTSSSRSKKKRVDQTANTVEIIRNTMEYANNQLKVIAEGPNLQRQDERA 60
           M  R    SE R  SS SK+KR     ++ +I+R  +EY N QL  IAE P LQRQD   
Sbjct: 393 METRTARVSERRNVSSGSKRKRPGHATDSGDIVRIAIEYGNEQLHRIAEWPILQRQDATQ 452

Query: 61  SRAEVVRQLQEVPELSTRDRVRLMWKIMRNIDDMKAFLEVPNELKLDYCMGILKDN 117
           +R E+VRQL+ +PEL+  DR RLM  IM NIDDMKAFLEVP+ +K  YC  IL++N
Sbjct: 453 TRQEIVRQLEAIPELTLMDRCRLMHIIMHNIDDMKAFLEVPDNMKYSYCNIILQEN 508

[Close]

BLAST of MELO3C022191 vs. NCBI nr
Match: gi|307136287|gb|ADN34114.1| (retrotransposon protein [Cucumis melo subsp. melo])

HSP 1 Score: 113.2 bits (282), Expect = 3.0e-22
Identity = 59/116 (50.86%), Postives = 76/116 (65.52%), Query Frame = 1


Query: 1   MSIRPGCSSESRTSSSRSKKKRVDQTANTVEIIRNTMEYANNQLKVIAEGPNLQRQDERA 60
           M  R    SE R  SS SK+KR     ++ +I+R  +EY N QL  IAE P LQRQD   
Sbjct: 541 METRTARVSERRNVSSGSKRKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQ 600

Query: 61  SRAEVVRQLQEVPELSTRDRVRLMWKIMRNIDDMKAFLEVPNELKLDYCMGILKDN 117
           +R E+VR L+ +PEL+  DR RLM  +MRN+DDMKAFLEVP+ +K  YC  IL++N
Sbjct: 601 TRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQEN 656

[Close]

BLAST of MELO3C022191 vs. NCBI nr
Match: gi|659082641|ref|XP_008441954.1| (PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo])

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-19
Identity = 52/113 (46.02%), Postives = 79/113 (69.91%), Query Frame = 1


Query: 3   IRPGCSSESRTSSSRSKKKRVDQTANTVEIIRNTMEYANNQLKVIAEGPNLQRQDERASR 62
           IR G +SE R  SS SK+KR  +   TVE+IR+ ME+ N QLK IA+ P  +R  E   R
Sbjct: 192 IRAGQASERRNCSSVSKRKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMR 251

Query: 63  AEVVRQLQEVPELSTRDRVRLMWKIMRNIDDMKAFLEVPNELKLDYCMGILKD 116
           A+VV+QLQ++P+L ++DR +LM  + R+++ ++ FL +P ELKL+YC  +L++
Sbjct: 252 AQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFLSIPTELKLEYCNILLQN 304

[Close]

BLAST of MELO3C022191 vs. NCBI nr
Match: gi|659123900|ref|XP_008461893.1| (PREDICTED: uncharacterized protein LOC103500387 [Cucumis melo])

HSP 1 Score: 102.8 bits (255), Expect = 4.1e-19
Identity = 58/116 (50.00%), Postives = 76/116 (65.52%), Query Frame = 1


Query: 1   MSIRPGCSSESRTSSSRSKKKRVDQTANTVEIIRNTMEYANNQLKVIAEGPNLQRQDERA 60
           M  R    SE R  SS SK+KR   T ++ +I+R  +EY N QL  IAE   LQRQD   
Sbjct: 135 MGTRTARVSEGRYVSSGSKQKRGGSTIDSGDILRTAIEYGNEQLNRIAEWHVLQRQDATQ 194

Query: 61  SRAEVVRQLQEVPELSTRDRVRLMWKIMRNIDDMKAFLEVPNELKLDYCMGILKDN 117
           +R EVVRQL+ +PEL+  DR RLM  ++ N++DMKAFLEVP+ +K  YC  IL++N
Sbjct: 195 TRQEVVRQLEAIPELTLMDRCRLMRILIHNVNDMKAFLEVPDNMK-PYCSIILEEN 249

The following BLAST results are available for this feature:

BLAST of MELO3C022191 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEB9_CUCSA	2.7e-25	58.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G643760 PE=4 SV=1	[more]
E5GCB5_CUCME	2.1e-22	50.86	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
A0A0A0KFW0_CUCSA	1.2e-17	47.71	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G116150 PE=4 SV=1	[more]
E5GBB2_CUCME	8.4e-11	35.71	Retrotransposon protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
E5GBB1_CUCME	5.4e-10	38.95	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]

BLAST of MELO3C022191 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700203303\|gb\|KGN58436.1\|	3.8e-25	58.65	hypothetical protein Csa_3G643760 [Cucumis sativus]	[more]
gi\|659133698\|ref\|XP_008466863.1\|	2.3e-22	52.59	PREDICTED: uncharacterized protein LOC103504172 [Cucumis melo]	[more]
gi\|307136287\|gb\|ADN34114.1\|	3.0e-22	50.86	retrotransposon protein [Cucumis melo subsp. melo]	[more]
gi\|659082641\|ref\|XP_008441954.1\|	1.1e-19	46.02	PREDICTED: uncharacterized protein At2g29880-like [Cucumis melo]	[more]
gi\|659123900\|ref\|XP_008461893.1\|	4.1e-19	50.00	PREDICTED: uncharacterized protein LOC103500387 [Cucumis melo]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C022191T1	MELO3C022191T1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C022191	Cucumber (Chinese Long) v3	cucmeB358
MELO3C022191	Watermelon (97103) v2	mewmbB036
MELO3C022191	Wax gourd	mewgoB034
MELO3C022191	Cucumber (Gy14) v1	cgymeB401
MELO3C022191	Cucurbita maxima (Rimu)	cmameB010
MELO3C022191	Cucurbita maxima (Rimu)	cmameB383
MELO3C022191	Cucurbita moschata (Rifu)	cmomeB000
MELO3C022191	Cucurbita moschata (Rifu)	cmomeB375
MELO3C022191	Wild cucumber (PI 183967)	cpimeB349
MELO3C022191	Cucumber (Chinese Long) v2	cumeB358
MELO3C022191	Cucumber (Chinese Long) v2	cumeB368
MELO3C022191	Watermelon (Charleston Gray)	mewcgB037
MELO3C022191	Watermelon (97103) v1	mewmB009
MELO3C022191	Cucurbita pepo (Zucchini)	cpemeB486
MELO3C022191	Cucurbita pepo (Zucchini)	cpemeB708
MELO3C022191	Bottle gourd (USVL1VR-Ls)	lsimeB461
MELO3C022191	Cucumber (Gy14) v2	cgybmeB299