MELO3C021968 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021968
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ty3/gypsy retrotransposon protein
Location	chr9 : 2462443 .. 2463150 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCCCCTTTGAGGCTCTCTATGGTTGGCCACCGCCCTCTATATTACCGTATGTGAAGGGCTCGAGTCCGGTGTATGAAGTAGACCATTTGATGAAAGAAAGAGATGGAATCCTGGGCATTCTAAAGGCCAATTTACTAAAGGCACAACATCGAATGGTCAAATATGCCAATGCCAAACGACGAGAGGTGCAGTTTGAGATCCATGATTGGGTTTATGTGAAGTTACGTCCTTACCAACAGTCCTCTCTCAGCTGTTTTAAGCACCCCAAATTGGCCCCAAGTTTCATTAGTCCATTTATGATTGTGGCGTGAATTGGTCAGGTTGCATACCGTTTGGCCCTTCCCAAGGAATCGCTTATACATCCGGTCTTTCATGTTTCTGTTCTTTGCAAGGCAGTGGGTTCAAACAGGCCACTATTCCCAATCCCAAAAGATTTGGCTGTTGATTTGTCTATGCAATTGTATCTGGTAGAAGTGTTGGGAGTTCGTAAAACAAGAGAAAAGGAGGACAACTTAGAAGTTTTGATCCGTTGGAGTGAGGGTACACCTGAAAGTGCAACATGGGAACAAGCCACTCTTATTCAAGAACAATTTCCTGAATTCCACCTTAAGGACAAGGTGACTCTTTGGGGGGTGGGTGATGATAGACCTCCCATATTAAAGGTGTATTCCCGTAGAGGCAAGAATAGAAAGAAGAAAGAATGA

mRNA sequence

ATGACCCCCTTTGAGGCTCTCTATGGTTGGCCACCGCCCTCTATATTACCGTATGTGAAGGGCTCGAGTCCGGTGTATGAAGTAGACCATTTGATGAAAGAAAGAGATGGAATCCTGGGCATTCTAAAGGCCAATTTACTAAAGGCACAACATCGAATGGTCAAATATGCCAATGCCAAACGACGAGAGGTTGCATACCGTTTGGCCCTTCCCAAGGAATCGCTTATACATCCGGTCTTTCATGTTTCTGTTCTTTGCAAGGCAGTGGGTTCAAACAGGCCACTATTCCCAATCCCAAAAGATTTGGCTGTTGATTTGTCTATGCAATTGTATCTGGTAGAAGTGTTGGGAGTTCGTAAAACAAGAGAAAAGGAGGACAACTTAGAAGTTTTGATCCGTTGGAGTGAGGGTACACCTGAAAGTGCAACATGGGAACAAGCCACTCTTATTCAAGAACAATTTCCTGAATTCCACCTTAAGGACAAGGTGACTCTTTGGGGGGTGGGTGATGATAGACCTCCCATATTAAAGGTGTATTCCCGTAGAGGCAAGAATAGAAAGAAGAAAGAATGA

Coding sequence (CDS)

ATGACCCCCTTTGAGGCTCTCTATGGTTGGCCACCGCCCTCTATATTACCGTATGTGAAGGGCTCGAGTCCGGTGTATGAAGTAGACCATTTGATGAAAGAAAGAGATGGAATCCTGGGCATTCTAAAGGCCAATTTACTAAAGGCACAACATCGAATGGTCAAATATGCCAATGCCAAACGACGAGAGGTTGCATACCGTTTGGCCCTTCCCAAGGAATCGCTTATACATCCGGTCTTTCATGTTTCTGTTCTTTGCAAGGCAGTGGGTTCAAACAGGCCACTATTCCCAATCCCAAAAGATTTGGCTGTTGATTTGTCTATGCAATTGTATCTGGTAGAAGTGTTGGGAGTTCGTAAAACAAGAGAAAAGGAGGACAACTTAGAAGTTTTGATCCGTTGGAGTGAGGGTACACCTGAAAGTGCAACATGGGAACAAGCCACTCTTATTCAAGAACAATTTCCTGAATTCCACCTTAAGGACAAGGTGACTCTTTGGGGGGTGGGTGATGATAGACCTCCCATATTAAAGGTGTATTCCCGTAGAGGCAAGAATAGAAAGAAGAAAGAATGA

Protein sequence

MTPFEALYGWPPPSILPYVKGSSPVYEVDHLMKERDGILGILKANLLKAQHRMVKYANAKRREVAYRLALPKESLIHPVFHVSVLCKAVGSNRPLFPIPKDLAVDLSMQLYLVEVLGVRKTREKEDNLEVLIRWSEGTPESATWEQATLIQEQFPEFHLKDKVTLWGVGDDRPPILKVYSRRGKNRKKKE*

Homology

[Close]

BLAST of MELO3C021968 vs. TrEMBL
Match: A5C0Y9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012977 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 7.4e-25
Identity = 77/181 (42.54%), Postives = 105/181 (58.01%), Query Frame = 1


Query: 1    MTPFEALYGWPPPSILPYVKGSSPVYEVDHLMKERDGILGILKANLLKAQHRMVKYANAK 60
            M PF A+YG  PP +L Y   S+ V EVD L++ERD IL  LK +L  AQ       N +
Sbjct: 1083 MKPFRAVYGRDPPPLLHYGSDSTSVLEVDQLLQERDLILNELKDHLYCAQ----SIQNEQ 1142

Query: 61   RREVAYRLALPKESLIHPVFHVSVLCKAVGSNRPLFPIPKDLAVDLSMQLYLVEVLGVRK 120
               V Y+L LP    IHPVFHVS L   +GS     P    LA D   ++   +VL +R+
Sbjct: 1143 IAPVVYKLELPSSETIHPVFHVSQLKWTLGSADLCQPFSLVLADDSEWRVEPDQVLDIRQ 1202

Query: 121  T-REKEDNLEVLIRWSEGTPE-SATWEQATLIQEQFPEFHLKDKVTLWGVGDDRPPILKV 180
            +    + ++EVLI+W +G P+  A+WE    I++ FP+FHL+DKV+L   G+DRPP   V
Sbjct: 1203 SPNNNQPDIEVLIQW-KGLPQFEASWELVDTIKKHFPDFHLEDKVSLIEGGNDRPPTRCV 1258

[Close]

BLAST of MELO3C021968 vs. TrEMBL
Match: A0A0L9V4A1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g059400 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 6.9e-23
Identity = 84/238 (35.29%), Postives = 118/238 (49.58%), Query Frame = 1


Query: 2    TPFEALYGWPPPSILPYVKGSSPVYEVDHLMKERDGILGILKANLLKAQ----------- 61
            TPFE +YG PPPS+  +V G + V  V+  ++ RD  L  LK +L +AQ           
Sbjct: 1283 TPFETVYGRPPPSLHRFVPGETLVEAVNQELQTRDEALHQLKFHLARAQELMVRQADKAR 1342

Query: 62   -----------------HRMVKYANAKRRE-----------------VAYRLALPKESLI 121
                             HR    ++    +                 VA++L LP+ + I
Sbjct: 1343 RPSQVGVGDWVYLKIRPHRQTTMSSTVHSKLAARYFGPFLVIQQVGAVAFKLQLPESARI 1402

Query: 122  HPVFHVSVLCKAVGSNRPLFPIPKDLAVDLSMQ---LYLVEVLGVRKTREKED-NLEVLI 181
            HPVFH S L KAVG +R    I ++L  DL M+      V VL  R+ ++ ED   EVLI
Sbjct: 1403 HPVFHASQLKKAVGDHR----IEQELPTDLEMEEPSPRPVRVLDKRQVQQGEDERQEVLI 1462

Query: 182  RWSEGTPESATWEQATLIQEQFPEFHLKDKVTLWGVGDDRPPILKVYSRRGKNRKKKE 191
             W EG P+ ATWE A  I++Q+P+F+L+DKV L  VG+ R    +VY RR   R++ E
Sbjct: 1463 EWQEGGPDGATWEDALTIRDQYPDFNLEDKVDLQEVGNVR--AWRVYERRRYRRERGE 1514

[Close]

BLAST of MELO3C021968 vs. TrEMBL
Match: A0A0L9VPT2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g265600 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.0e-23
Identity = 84/238 (35.29%), Postives = 118/238 (49.58%), Query Frame = 1


Query: 2   TPFEALYGWPPPSILPYVKGSSPVYEVDHLMKERDGILGILKANLLKAQ----------- 61
           TPFE +YG PPPS+  +V G + V  V+  ++ RD  L  LK +L +AQ           
Sbjct: 493 TPFETVYGRPPPSLHRFVPGETLVEAVNQELQTRDEALHQLKFHLARAQELMVRQADKAR 552

Query: 62  -----------------HRMVKYANAKRRE-----------------VAYRLALPKESLI 121
                            HR    ++  + +                 VA++L LP+ + I
Sbjct: 553 RPSQVGVGDWVYLKIRPHRQTTMSSTVQSKLAARYFGPFLVIQQVGAVAFKLQLPESARI 612

Query: 122 HPVFHVSVLCKAVGSNRPLFPIPKDLAVDLSMQ---LYLVEVLGVRKTREKED-NLEVLI 181
           HPVFH S L KAVG +R    I ++L  DL M+      V VL  R+ ++ ED   EVLI
Sbjct: 613 HPVFHASQLKKAVGDHR----IEQELPTDLEMEEPSPRPVRVLDKRQVQQGEDERQEVLI 672

Query: 182 RWSEGTPESATWEQATLIQEQFPEFHLKDKVTLWGVGDDRPPILKVYSRRGKNRKKKE 191
            W EG P+ ATWE A  IQ+Q+P+F+L+DKV L   G+ R    +VY RR   R++ E
Sbjct: 673 EWQEGGPDGATWEDALTIQDQYPDFNLEDKVDLQEEGNVR--AWRVYERRRYRRERGE 724

[Close]

BLAST of MELO3C021968 vs. TrEMBL
Match: A0A087G0A8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AAs43195U000200 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-21
Identity = 80/235 (34.04%), Postives = 118/235 (50.21%), Query Frame = 1


Query: 1    MTPFEALYGWPPPSILPYVKGSSPVYEVDHLMKERDGILGILKANLLKAQ---------H 60
            M+PF+ALYG  PP++L Y  GS+ + +++ ++KERD ++ +LK ++LKAQ         H
Sbjct: 1250 MSPFQALYGREPPTLLRYEDGSTKIAKLEEMLKERDAMVQLLKQHILKAQQLMKRRVDGH 1309

Query: 61   R----------------------MVKYANAKRR--------------EVAYRLALPKESL 120
            R                      + K  N K                EVAY+L LP  S 
Sbjct: 1310 RRELEFHVGDMVFLKLKPYRQQSLAKRVNEKLAARFYGPYEVEARVGEVAYKLKLPTGSK 1369

Query: 121  IHPVFHVSVLCKAVGSNRPLFPIPKDLAVDLSMQLYLVEVLGVRKTREKEDNLEVLIRWS 180
            IH  FH+S L KAVGS+     +P  L  +  ++      +GVR    +    EVLI+W 
Sbjct: 1370 IHHTFHISQLKKAVGSSFQPMDLPDQLTGEGVLEAEPEACMGVR-VHPQTSQEEVLIKW- 1429

Query: 181  EGTPE-SATWEQATLIQEQFPEFHLKDKVTLWGVG-----DDRPPILKVYSRRGK 185
            +G P+  +TWE + +IQEQFP F+L+DKV+    G      ++ PI+  Y RR K
Sbjct: 1430 KGLPDCDSTWEWSGVIQEQFPSFNLEDKVSFKEAGIVTSISEKTPIVHHYRRRKK 1482

[Close]

BLAST of MELO3C021968 vs. TrEMBL
Match: A0A151SDU6_CAJCA (Retrotransposable element Tf2 OS=Cajanus cajan GN=KK1_025100 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.8e-21
Identity = 82/230 (35.65%), Postives = 111/230 (48.26%), Query Frame = 1


Query: 1   MTPFEALYGWPPPSILPYVKGSSPVYEVDHLMKERDGILG-------------------- 60
           MTPF+A+YG  PP+I       S V  V+ + +ERDG+L                     
Sbjct: 97  MTPFKAVYGRDPPAIFKAPTFPSKVESVNVMAEERDGVLEELKANIGKAQHRMKQQADRK 156

Query: 61  -------ILKANLLKAQHRMVKYANAKRRE------------------VAYRLALPKESL 120
                  +     LKAQ   +K    +R E                  VAY+L LP+ S 
Sbjct: 157 RRDVNFEVGDWVYLKAQPYRLKSLAKRRNEKLGPRYYGPFRVLAKVGAVAYKLQLPESSR 216

Query: 121 IHPVFHVSVLCKAVGSNRPLFPIPKDLAVDLSMQLYLVEVLGVRKTREKEDNLEVLIRWS 180
           IHPVFHVS L KAV   + +  +P++++VD  +Q    E+L  R +R  E  LEVLI+W 
Sbjct: 217 IHPVFHVSKLKKAVPLEKQVQSLPEEISVDWELQPQPAELLSYRYSRTGE--LEVLIQWH 276

Query: 181 EGTPESATWEQATLIQEQFPEFHLKDKVTLWGVGDDRPPILK-VYSRRGK 185
                  +WE AT +Q  FP+FHL+DKV   G   DR P++K VY RR K
Sbjct: 277 NLPDCENSWETATKMQTAFPQFHLEDKVIARGGSIDRGPVVKQVYVRREK 324

[Close]

BLAST of MELO3C021968 vs. NCBI nr
Match: gi|971583286|ref|XP_015159974.1| (PREDICTED: uncharacterized protein LOC102595311 [Solanum tuberosum])

HSP 1 Score: 129.8 bits (325), Expect = 5.1e-27
Identity = 90/234 (38.46%), Postives = 114/234 (48.72%), Query Frame = 1


Query: 1    MTPFEALYGWPPPSILPYVKGSSPVYEVDHLMKERDGILGILKANLLKAQHRMVKYANAK 60
            MTPF ALYG  PPS+L +    S V EV+  +  R+ IL  LK NL+ AQ +M  YA+AK
Sbjct: 1313 MTPFRALYGRDPPSLLRFTDEISAVEEVNQQLMARNNILDELKDNLIHAQAQMKVYADAK 1372

Query: 61   RREV---------------------------------------------AYRLALPKESL 120
            RREV                                             AYRL LP  S 
Sbjct: 1373 RREVVFQPGDLVYLRVQPFKLRSLAKKVNQKLSPRYYGPYTILNKIGEVAYRLDLPPHSR 1432

Query: 121  IHPVFHVSVLCKAVGSNRPLFPIPKDLAVDLSMQLYLVEVLGVRKTREKEDNLEVLIRWS 180
            +HPVFHVS L +AV  + P+  +P  L+ +L +Q+    V+          + EVLI+W 
Sbjct: 1433 VHPVFHVSWLKRAVKDSTPVQQLPPFLSDELELQVQPEGVVDCHTLLN--GSKEVLIKW- 1492

Query: 181  EGTPE-SATWEQATLIQEQFPEFHLKDKVTLWGVGDDRPPILKVYSRRGKNRKK 189
            EG P+   TWE   +I  QFP FHL+DKV L G G  RP + KVY RR K   K
Sbjct: 1493 EGLPDFENTWESYEIIDAQFPHFHLEDKVKLVGAGIVRPVVTKVYERRKKGENK 1543

[Close]

BLAST of MELO3C021968 vs. NCBI nr
Match: gi|720096804|ref|XP_010247105.1| (PREDICTED: uncharacterized protein LOC104590232 [Nelumbo nucifera])

HSP 1 Score: 125.6 bits (314), Expect = 9.6e-26
Identity = 73/188 (38.83%), Postives = 106/188 (56.38%), Query Frame = 1


Query: 12  PPSILPYVKGSSPVYEVDHLMKERDGILGILKANLLKAQHRMVKYANAKRR--------- 71
           PP ++ Y  GS+   +V+ ++ +RD IL  L+A+L +AQ +M    +   R         
Sbjct: 206 PPPLIRYELGSTANADVEAVLLQRDAILRELRAHLHRAQQKMKDSTDLAPRFYGPFAIEE 265

Query: 72  ---EVAYRLALPKESLIHPVFHVSVLCKAVGSNRPLFPIPKDLAVDLSMQLYLVEVLGVR 131
               VAY+L LP  + IHPVFHVS L KA+G++     +P  L+ D+ M +  V V GVR
Sbjct: 266 RIGAVAYKLQLPPNARIHPVFHVSQLKKAIGNHISSPMVPSTLSADMEMLVEPVAVQGVR 325

Query: 132 -KTREKEDNLEVLIRWSEGTPESATWEQATLIQEQFPEFHLKDKVTLWGVGDDRPPILKV 187
             T       EVLI W +      +WE   L+++QFP F+L+DKV LW  G+DRPPI   
Sbjct: 326 PSTMPGVTGSEVLIHWQDLPDFEDSWEPFNLLRDQFPHFYLEDKVRLWAAGNDRPPINFT 385

[Close]

BLAST of MELO3C021968 vs. NCBI nr
Match: gi|147828709|emb|CAN66228.1| (hypothetical protein VITISV_012977 [Vitis vinifera])

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-24
Identity = 77/181 (42.54%), Postives = 105/181 (58.01%), Query Frame = 1


Query: 1    MTPFEALYGWPPPSILPYVKGSSPVYEVDHLMKERDGILGILKANLLKAQHRMVKYANAK 60
            M PF A+YG  PP +L Y   S+ V EVD L++ERD IL  LK +L  AQ       N +
Sbjct: 1083 MKPFRAVYGRDPPPLLHYGSDSTSVLEVDQLLQERDLILNELKDHLYCAQ----SIQNEQ 1142

Query: 61   RREVAYRLALPKESLIHPVFHVSVLCKAVGSNRPLFPIPKDLAVDLSMQLYLVEVLGVRK 120
               V Y+L LP    IHPVFHVS L   +GS     P    LA D   ++   +VL +R+
Sbjct: 1143 IAPVVYKLELPSSETIHPVFHVSQLKWTLGSADLCQPFSLVLADDSEWRVEPDQVLDIRQ 1202

Query: 121  T-REKEDNLEVLIRWSEGTPE-SATWEQATLIQEQFPEFHLKDKVTLWGVGDDRPPILKV 180
            +    + ++EVLI+W +G P+  A+WE    I++ FP+FHL+DKV+L   G+DRPP   V
Sbjct: 1203 SPNNNQPDIEVLIQW-KGLPQFEASWELVDTIKKHFPDFHLEDKVSLIEGGNDRPPTRCV 1258

[Close]

BLAST of MELO3C021968 vs. NCBI nr
Match: gi|729375164|ref|XP_010548864.1| (PREDICTED: uncharacterized protein LOC104820194 [Tarenaya hassleriana])

HSP 1 Score: 121.3 bits (303), Expect = 1.8e-24
Identity = 77/195 (39.49%), Postives = 111/195 (56.92%), Query Frame = 1


Query: 2    TPFEALYGWPPPSILPYVKGSSPVYEVDHLMKERDGILGILKANLLKAQHRM---VKYAN 61
            TPF+ +YG  PP++L + +GS+  +E++  ++ERD +L  +K  L  AQ RM   +   +
Sbjct: 1341 TPFQIVYGREPPTLLKFEEGSTSNFELEKALRERDRMLMEVKQRLQVAQQRMKVQLIRED 1400

Query: 62   AKRREVAYRLALPKESLIHPVFHVSVLCKAVGSNRPLFPIPKDLAVDLSMQLYLVEVLGV 121
             +  EVAY+L LPK   IHPVFH+S L KA+GSN     +PK L  +L +Q+   ++   
Sbjct: 1401 VRIGEVAYKLKLPKGCNIHPVFHISQLKKAMGSNLQPNQLPKQLTRELELQVQPKDIKDS 1460

Query: 122  RKTREKEDNLEVLIRWSEGTPESATWEQATLIQEQFPEFHLKDKVTLWGVGDDRPPILKV 181
            R T  KE  LEVL+ W +      TWE A    +QFP F L+DK+   G   D+    +V
Sbjct: 1461 RYT--KEGWLEVLVEWQDLPEHENTWEVAEDFNKQFPSFQLEDKLRQKGGSIDK--YFRV 1520

Query: 182  YSR---RGKNRKKKE 191
            Y R   RGK  +K E
Sbjct: 1521 YVRGRKRGKEAEKGE 1531

[Close]

BLAST of MELO3C021968 vs. NCBI nr
Match: gi|920707770|gb|KOM49767.1| (hypothetical protein LR48_Vigan08g059400 [Vigna angularis])

HSP 1 Score: 115.5 bits (288), Expect = 9.9e-23
Identity = 84/238 (35.29%), Postives = 118/238 (49.58%), Query Frame = 1


Query: 2    TPFEALYGWPPPSILPYVKGSSPVYEVDHLMKERDGILGILKANLLKAQ----------- 61
            TPFE +YG PPPS+  +V G + V  V+  ++ RD  L  LK +L +AQ           
Sbjct: 1283 TPFETVYGRPPPSLHRFVPGETLVEAVNQELQTRDEALHQLKFHLARAQELMVRQADKAR 1342

Query: 62   -----------------HRMVKYANAKRRE-----------------VAYRLALPKESLI 121
                             HR    ++    +                 VA++L LP+ + I
Sbjct: 1343 RPSQVGVGDWVYLKIRPHRQTTMSSTVHSKLAARYFGPFLVIQQVGAVAFKLQLPESARI 1402

Query: 122  HPVFHVSVLCKAVGSNRPLFPIPKDLAVDLSMQ---LYLVEVLGVRKTREKED-NLEVLI 181
            HPVFH S L KAVG +R    I ++L  DL M+      V VL  R+ ++ ED   EVLI
Sbjct: 1403 HPVFHASQLKKAVGDHR----IEQELPTDLEMEEPSPRPVRVLDKRQVQQGEDERQEVLI 1462

Query: 182  RWSEGTPESATWEQATLIQEQFPEFHLKDKVTLWGVGDDRPPILKVYSRRGKNRKKKE 191
             W EG P+ ATWE A  I++Q+P+F+L+DKV L  VG+ R    +VY RR   R++ E
Sbjct: 1463 EWQEGGPDGATWEDALTIRDQYPDFNLEDKVDLQEVGNVR--AWRVYERRRYRRERGE 1514

The following BLAST results are available for this feature:

BLAST of MELO3C021968 vs. TrEMBL


Match Name	E-value	Identity	Description
A5C0Y9_VITVI	7.4e-25	42.54	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012977 PE=4 SV=1	[more]
A0A0L9V4A1_PHAAN	6.9e-23	35.29	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan08g059400 PE=4 SV=1	[more]
A0A0L9VPT2_PHAAN	9.0e-23	35.29	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan10g265600 PE=4 SV=1	[more]
A0A087G0A8_ARAAL	1.7e-21	34.04	Uncharacterized protein OS=Arabis alpina GN=AALP_AAs43195U000200 PE=4 SV=1	[more]
A0A151SDU6_CAJCA	3.8e-21	35.65	Retrotransposable element Tf2 OS=Cajanus cajan GN=KK1_025100 PE=4 SV=1	[more]

BLAST of MELO3C021968 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|971583286\|ref\|XP_015159974.1\|	5.1e-27	38.46	PREDICTED: uncharacterized protein LOC102595311 [Solanum tuberosum]	[more]
gi\|720096804\|ref\|XP_010247105.1\|	9.6e-26	38.83	PREDICTED: uncharacterized protein LOC104590232 [Nelumbo nucifera]	[more]
gi\|147828709\|emb\|CAN66228.1\|	1.1e-24	42.54	hypothetical protein VITISV_012977 [Vitis vinifera]	[more]
gi\|729375164\|ref\|XP_010548864.1\|	1.8e-24	39.49	PREDICTED: uncharacterized protein LOC104820194 [Tarenaya hassleriana]	[more]
gi\|920707770\|gb\|KOM49767.1\|	9.9e-23	35.29	hypothetical protein LR48_Vigan08g059400 [Vigna angularis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016197	Chromo-like_dom_sf
IPR023780	Chromo_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU62821	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021968T1	MELO3C021968T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU62821	MU62821	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016197	Chromo domain-like	unknown	SSF54160	Chromo domain-like	coord: 76..154 score: 1.5
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 115..156 score: 4.
None	No IPR available	GENE3D	G3DSA:2.40.50.40		coord: 110..158 score: 4.
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 1..157 score: 4.6
None	No IPR available	PANTHER	PTHR24559:SF186	SUBFAMILY NOT NAMED	coord: 1..157 score: 4.6

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021968	Cucumber (Gy14) v2	cgybmeB001
MELO3C021968	Cucumber (Gy14) v2	cgybmeB299
MELO3C021968	Silver-seed gourd	carmeB0260
MELO3C021968	Silver-seed gourd	carmeB0682
MELO3C021968	Wax gourd	mewgoB022
MELO3C021968	Cucumber (Chinese Long) v3	cucmeB000
MELO3C021968	Cucumber (Chinese Long) v3	cucmeB167
MELO3C021968	Cucumber (Chinese Long) v3	cucmeB358
MELO3C021968	Watermelon (97103) v2	mewmbB011
MELO3C021968	Watermelon (97103) v2	mewmbB014
MELO3C021968	Watermelon (97103) v2	mewmbB026
MELO3C021968	Watermelon (97103) v2	mewmbB038
MELO3C021968	Wax gourd	mewgoB046
MELO3C021968	Melon (DHL92) v3.5.1	memeB005
MELO3C021968	Melon (DHL92) v3.5.1	memeB012
MELO3C021968	Melon (DHL92) v3.5.1	memeB014
MELO3C021968	Cucumber (Gy14) v1	cgymeB114
MELO3C021968	Cucumber (Gy14) v1	cgymeB265
MELO3C021968	Cucumber (Gy14) v1	cgymeB472
MELO3C021968	Cucumber (Gy14) v1	cgymeB550
MELO3C021968	Cucurbita maxima (Rimu)	cmameB251
MELO3C021968	Cucurbita maxima (Rimu)	cmameB634
MELO3C021968	Cucurbita moschata (Rifu)	cmomeB239
MELO3C021968	Cucurbita moschata (Rifu)	cmomeB624
MELO3C021968	Cucurbita moschata (Rifu)	cmomeB630
MELO3C021968	Wild cucumber (PI 183967)	cpimeB000
MELO3C021968	Wild cucumber (PI 183967)	cpimeB165
MELO3C021968	Wild cucumber (PI 183967)	cpimeB349
MELO3C021968	Wild cucumber (PI 183967)	cpimeB354
MELO3C021968	Cucumber (Chinese Long) v2	cumeB005
MELO3C021968	Cucumber (Chinese Long) v2	cumeB174
MELO3C021968	Cucumber (Chinese Long) v2	cumeB358
MELO3C021968	Watermelon (Charleston Gray)	mewcgB002
MELO3C021968	Watermelon (Charleston Gray)	mewcgB007
MELO3C021968	Watermelon (Charleston Gray)	mewcgB029
MELO3C021968	Watermelon (97103) v1	mewmB003
MELO3C021968	Watermelon (97103) v1	mewmB008
MELO3C021968	Watermelon (97103) v1	mewmB021
MELO3C021968	Cucurbita pepo (Zucchini)	cpemeB155
MELO3C021968	Cucurbita pepo (Zucchini)	cpemeB358
MELO3C021968	Cucurbita pepo (Zucchini)	cpemeB467
MELO3C021968	Bottle gourd (USVL1VR-Ls)	lsimeB162
MELO3C021968	Bottle gourd (USVL1VR-Ls)	lsimeB163