MELO3C021964 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021964
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	LOB domain protein 27
Location	chr9 : 2489174 .. 2489970 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAATTAAAGGTGGCACAAGCCAAGCCTGCGCCGCTTGCAAATACCAACGTCGCCGCTGCTCGAAAGACTGTGCCTTAGCACCATATTTTCCCGCTGATCAACCAAAGATGTTTCAAAATGCCCACCGTCTCTTTGGTGTCTGCAATATAATGAAGATCCTCAAACAAGTTCATCCGTCGCAGAAAGACGAAACAATGACTTCAATCATCTACGAATCGAACATGCGTTCTAGGTTTCCGATTCATGGGTGTTGTGGTGTCATATGGCAACTACATTATCAAATACAACAAGTGGCCGAAGAGCTTCGACAAGTTAGGAGTAGAGTAGATATGGTGAAAGAACAGTTTAATCAAATCAACAATATCGGGATTACAGAAGGAGAAGGAGTTGGAATTCTAGGTAATAACGACATTGGTTATCCGATTTATGCACAACCGCAGCAGCAGCAACAGTATAATTCGAATTCGGGGTCACTTGTAAATCAAGGAATAGATGGAAGTGATTTATTATTTGGAAATTTGAACATGAATAATGGGGGAATTTATGTTGATAATGATGATAATAATGGATTGATGTTGAAGGAGTTGAGAATTCAACAACATTACAATGATAACTATGGGATTAATATTAGTAATGTTGATTCAATGCTGATGCAATCTAACTTGATACCTGGAGCTTACCCTTTGCAACAAGAAATGGAAATTTCTCATGATTATGATGATCAAATTGCCTTTGACACAATTGCTGATGATCGTCAATCATATATTGAATCTAAGGAAGCATGCGATTCTAG

mRNA sequence

ATGACAATTAAAGGTGGCACAAGCCAAGCCTGCGCCGCTTGCAAATACCAACGTCGCCGCTGCTCGAAAGACTGTGCCTTAGCACCATATTTTCCCGCTGATCAACCAAAGATGTTTCAAAATGCCCACCGTCTCTTTGGTGTCTGCAATATAATGAAGATCCTCAAACAAGTTCATCCGTCGCAGAAAGACGAAACAATGACTTCAATCATCTACGAATCGAACATGCGTTCTAGGTTTCCGATTCATGGGTGTTGTGGTGTCATATGGCAACTACATTATCAAATACAACAAGTGGCCGAAGAGCTTCGACAAGTTAGGAGTAGAGTAGATATGGTGAAAGAACAGTTTAATCAAATCAACAATATCGGGATTACAGAAGGAGAAGGAGTTGGAATTCTAGGTAATAACGACATTGGTTATCCGATTTATGCACAACCGCAGCAGCAGCAACAGTATAATTCGAATTCGGGGTCACTTGTAAATCAAGGAATAGATGGAAGTGATTTATTATTTGGAAATTTGAACATGAATAATGGGGGAATTTATGTTGATAATGATGATAATAATGGATTGATGTTGAAGGAGTTGAGAATTCAACAACATTACAATGATAACTATGGGATTAATATTAGTAATGTTGATTCAATGCTGATGCAATCTAACTTGATACCTGGAGCTTACCCTTTGCAACAAGAAATGGAAATTTCTCATGATTATGATGATCAAATTGCCTTTGACACAATTGCTGATGATCGTCAATCATATATTGAATCTAAGGAAGCATGCGATTCTAG

Coding sequence (CDS)

ATGACAATTAAAGGTGGCACAAGCCAAGCCTGCGCCGCTTGCAAATACCAACGTCGCCGCTGCTCGAAAGACTGTGCCTTAGCACCATATTTTCCCGCTGATCAACCAAAGATGTTTCAAAATGCCCACCGTCTCTTTGGTGTCTGCAATATAATGAAGATCCTCAAACAAGTTCATCCGTCGCAGAAAGACGAAACAATGACTTCAATCATCTACGAATCGAACATGCGTTCTAGGTTTCCGATTCATGGGTGTTGTGGTGTCATATGGCAACTACATTATCAAATACAACAAGTGGCCGAAGAGCTTCGACAAGTTAGGAGTAGAGTAGATATGGTGAAAGAACAGTTTAATCAAATCAACAATATCGGGATTACAGAAGGAGAAGGAGTTGGAATTCTAGGTAATAACGACATTGGTTATCCGATTTATGCACAACCGCAGCAGCAGCAACAGTATAATTCGAATTCGGGGTCACTTGTAAATCAAGGAATAGATGGAAGTGATTTATTATTTGGAAATTTGAACATGAATAATGGGGGAATTTATGTTGATAATGATGATAATAATGGATTGATGTTGAAGGAGTTGAGAATTCAACAACATTACAATGATAACTATGGGATTAATATTAGTAATGTTGATTCAATGCTGATGCAATCTAACTTGATACCTGGAGCTTACCCTTTGCAACAAGAAATGGAAATTTCTCATGATTATGATGATCAAATTGCCTTTGACACAATTGCTGATGATCGTCAATCATATATTGAATCTAAGGAAGCATGCGATTCTAG

Protein sequence

MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHPSQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQINNIGITEGEGVGILGNNDIGYPIYAQPQQQQQYNSNSGSLVNQGIDGSDLLFGNLNMNNGGIYVDNDDNNGLMLKELRIQQHYNDNYGINISNVDSMLMQSNLIPGAYPLQQEMEISHDYDDQIAFDTIADDRQSYIESKEACDS

Homology

[Close]

BLAST of MELO3C021964 vs. Swiss-Prot
Match: LBD27_ARATH (LOB domain-containing protein 27 OS=Arabidopsis thaliana GN=LBD27 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 2.3e-41
Identity = 110/306 (35.95%), Postives = 156/306 (50.98%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 60
           MT+KGGTS ACAACKYQRRRC+ DC LAPYFPA+QPK+FQN HRLFGV +I+KIL+++  
Sbjct: 27  MTLKGGTSGACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDE 86

Query: 61  SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQ---- 120
           +QK E M SII++S +R R P+HGC GV  QL Y I    EEL+ V S++ + + Q    
Sbjct: 87  TQKPEAMKSIIFQSYVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQLQLYRSQPQNG 146

Query: 121 --------FNQ-INNIGITEGE------------GVGILGNNDIG----------YPIYA 180
                    NQ I+ +G    +            G+G+  NN+             P+  
Sbjct: 147 QNQNQNHNHNQMIHELGSDHNKQQEDVTSQQLDLGMGLNVNNNQSNVVTPFFSSLLPVSE 206

Query: 181 QPQQQQQYNSNSGSLVNQGID--------GSDLLFGNLNM-NNGGIYVDNDDNNGLMLKE 240
             Q Q  Y  +   + N G          G ++L  N N+  +   ++ N++N G    +
Sbjct: 207 TQQPQMSYTYSCSEVNNNGYSPPAYNTDSGKEILTNNNNVWGDQNRFLYNNNNGGGYSNQ 266

Query: 241 LRIQQHYNDNYGINISNVDSMLMQSNLIPGAYPLQQEMEISHDYDDQIAFDTIADDRQSY 263
                    N    +  + S L+   ++   +   +E E  H+YD+   F  I DDRQS+
Sbjct: 267 NESCHEMKSN---GVMAIQSQLVNLQMVSN-HQRVEEEEADHEYDELHQFLDIIDDRQSF 326

[Close]

BLAST of MELO3C021964 vs. Swiss-Prot
Match: LBD22_ARATH (LOB domain-containing protein 22 OS=Arabidopsis thaliana GN=LBD22 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.8e-29
Identity = 70/167 (41.92%), Postives = 102/167 (61.08%), Query Frame = 1


Query: 7   TSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHPSQKDET 66
           T+QACAACKYQRR+C+ DC LAPYFP D+ + F NAH+LFGV NI KI+K + P +KD  
Sbjct: 33  TNQACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAA 92

Query: 67  MTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQIN----N 126
           M +I+++S+ R+  P+ GC G+I +L YQI+    EL  V  ++ M +++ +Q +    +
Sbjct: 93  MHTIMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFRDRAHQHHHQEPH 152

Query: 127 IGITEGEGVG-------ILGNNDI--GYPI-YAQPQQQQQYNSNSGS 160
           I + E E +        +  NN I   YP+ + Q   QQQY S+  +
Sbjct: 153 IQMQEQEDLSSFSSSCDLNNNNSIPYNYPLNHIQEPNQQQYCSSGNN 199

[Close]

BLAST of MELO3C021964 vs. Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.0e-25
Identity = 50/119 (42.02%), Postives = 78/119 (65.55%), Query Frame = 1


Query: 7   TSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHPSQKDET 66
           T+  CAACK+ RR+C  +C  APYFP DQP+ F N H++FG  N+ K+L ++HPSQ+++ 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 67  MTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQINNIGI 126
           + S+ YE++MR R P++GC GVI  L +Q       LRQ++  +   K + ++  ++GI
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQ-------LRQLQIDLSCAKSELSKYQSLGI 117

[Close]

BLAST of MELO3C021964 vs. Swiss-Prot
Match: IAL1_MAIZE (Protein IAL1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 6.6e-25
Identity = 48/111 (43.24%), Postives = 73/111 (65.77%), Query Frame = 1


Query: 6   GTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHPSQKDE 65
           GT   CAACK+ RR+C  DC  APYFP D P+ F   HR+FG  N+ K++ ++HP Q+++
Sbjct: 29  GTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQRED 88

Query: 66  TMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQ 117
            M S+ YE++MR R P++GC GVI  L + ++Q+ ++L   R++ ++ K Q
Sbjct: 89  AMNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDL--ARAKYELSKYQ 137

[Close]

BLAST of MELO3C021964 vs. Swiss-Prot
Match: LBD6_MAIZE (LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.5e-24
Identity = 48/111 (43.24%), Postives = 74/111 (66.67%), Query Frame = 1


Query: 6   GTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHPSQKDE 65
           GT   CAACK+ RR+C  DC  APYFP D P+ F + HR+FG  N+ K+L ++HP Q+++
Sbjct: 29  GTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQRED 88

Query: 66  TMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQ 117
            + S+ YE++MR R P++GC GVI  L + ++Q+ ++L   R++ ++ K Q
Sbjct: 89  AVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDL--ARAKYELSKYQ 137

[Close]

BLAST of MELO3C021964 vs. TrEMBL
Match: A0A0A0KXA1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633830 PE=4 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 4.9e-136
Identity = 242/272 (88.97%), Postives = 252/272 (92.65%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 60
           MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP
Sbjct: 28  MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 87

Query: 61  SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQI 120
           SQKDETMTSIIYESNMRSRFP+HGCCGVIWQLHYQIQQVAEELR VRSRVDMVKEQFNQ+
Sbjct: 88  SQKDETMTSIIYESNMRSRFPVHGCCGVIWQLHYQIQQVAEELRLVRSRVDMVKEQFNQM 147

Query: 121 NNIGITEGEGVGILGNNDIGYPIYAQPQQQQQYNS-----NSGSLVNQGIDGSDLLFGNL 180
           NNIGI+  E  G++GNND+ YPIY Q  QQQQYNS     NS SLVNQG D SDLLFGNL
Sbjct: 148 NNIGIS--ETAGVVGNNDVAYPIYTQQPQQQQYNSQQQQYNSASLVNQGTDASDLLFGNL 207

Query: 181 NMNNGGIYVDNDDNNGLMLKELRIQQHYNDNYGINISNVDSMLMQSNLIPG--AYPLQQE 240
           NMNNGGIYVDNDDNNGLMLKELRIQQHYNDNYGIN+SNVD+M+MQS+LIPG  AYPLQQE
Sbjct: 208 NMNNGGIYVDNDDNNGLMLKELRIQQHYNDNYGINMSNVDTMVMQSSLIPGVQAYPLQQE 267

Query: 241 MEISHDYDDQIAFDTIADDRQSYIESKEACDS 266
           MEISH YDDQIAFDTIADDRQSYIESKEACDS
Sbjct: 268 MEISHGYDDQIAFDTIADDRQSYIESKEACDS 297

[Close]

BLAST of MELO3C021964 vs. TrEMBL
Match: M5WV19_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023282mg PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 7.8e-65
Identity = 142/276 (51.45%), Postives = 189/276 (68.48%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 60
           MTIKGGTSQACAACKYQRRRC+KDC L+P+FPADQPKMFQNAHRL+GV NIMKI KQVHP
Sbjct: 1   MTIKGGTSQACAACKYQRRRCAKDCPLSPHFPADQPKMFQNAHRLYGVSNIMKIRKQVHP 60

Query: 61  SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFN-- 120
            Q++E M SIIYESNMR++FP+ GC G+I QL++Q+QQ  EELR VR+ + + K+Q    
Sbjct: 61  EQQNEAMRSIIYESNMRAKFPVTGCMGIINQLNFQLQQAIEELRYVRTHLVICKDQCQYR 120

Query: 121 ------QINNIGITEGEGVGILGNNDIGYPIYAQPQQQQQYNSNSGSLVNQGIDGSDLLF 180
                   ++   ++ + +G+  NND    +    Q Q QY S  G         ++ L 
Sbjct: 121 IPPSPPHYSSCPSSQLQ-LGMPSNNDASAALTIY-QHQYQYASAGGGAAGMSFVANEYLA 180

Query: 181 GNLNMNNGGIYVDNDDNNGLMLKELRIQQ-HYNDNYGINISNVDSML-MQSNLIPG-AYP 240
             L+     +Y+D++D    ++K LR+Q  +Y+DN      NVD ++ +QSNL+   A+P
Sbjct: 181 NGLS----AVYIDDND----VVKPLRVQHPYYSDN------NVDQLMAVQSNLVSSQAFP 240

Query: 241 LQQEMEISHDYDDQIAFDTIADDRQSYIESKEACDS 266
           + QEM++ HDYDD I FDTIADDRQSYIESK+AC+S
Sbjct: 241 IHQEMDVPHDYDD-IPFDTIADDRQSYIESKDACES 259

[Close]

BLAST of MELO3C021964 vs. TrEMBL
Match: A0A068V2V3_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042384001 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.2e-51
Identity = 122/269 (45.35%), Postives = 167/269 (62.08%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQV-H 60
           MT+KGGTSQACAACKYQRRRC+ DC LAPYFPADQPKMFQNAH+LFGV NI+KIL+Q+ H
Sbjct: 1   MTLKGGTSQACAACKYQRRRCTADCPLAPYFPADQPKMFQNAHKLFGVSNILKILRQLDH 60

Query: 61  PSQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQ 120
           PSQK   M SIIY+SN+R ++P+HGC G+I QL YQIQ   EEL+ + +++ + ++   Q
Sbjct: 61  PSQKLVAMKSIIYQSNIRDKYPVHGCLGIIQQLWYQIQLAEEELQAIHAQLALYRQHQQQ 120

Query: 121 INNIGITEGEGVGILGNNDIGYPIYAQPQQQQQYNSNSGSLVNQGIDGSDLLFGNLN--- 180
             + G+++      LG   +  P  A     Q    N  + V+    GS   + + +   
Sbjct: 121 EVSTGLSDSISQLHLG---MAPPSNALSHFHQDAPQNYDNTVSALPIGSHPTYSSNSANA 180

Query: 181 MNNGGIYVDNDDNNGLMLKELRIQQHYNDNYGINISNVDSMLMQSNLIPGAYPLQQEMEI 240
            N    Y+D+ +NN   +  L +QQ   +N   +I+N + M+MQS LI     + Q+   
Sbjct: 181 ANYNATYMDSKENNA--VNSLWVQQPPYNNSSSDINNSNPMVMQSQLINSQPLIIQQDCG 240

Query: 241 SHDYDDQIAFDTIADDRQSYIESKEACDS 266
           + DYD+   F    DDRQSYI SKEA +S
Sbjct: 241 TQDYDEMHPFFDTIDDRQSYIASKEAYES 264

[Close]

BLAST of MELO3C021964 vs. TrEMBL
Match: V4TMK4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021399mg PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 121/271 (44.65%), Postives = 163/271 (60.15%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQV-H 60
           MT+KGGTSQACA CKYQRRRCS +C LAPYFP DQPKMFQNAH+LFGV NI+KI+K +  
Sbjct: 1   MTLKGGTSQACAVCKYQRRRCSAECLLAPYFPPDQPKMFQNAHKLFGVSNIVKIIKNLDS 60

Query: 61  PSQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQ 120
             QK E M SIIY++N+R RFP+HGC G+I QL YQI Q  EEL  V ++++M ++ + Q
Sbjct: 61  DEQKAEAMRSIIYQANIRDRFPVHGCWGIICQLRYQIWQAEEELHAVHAQLEMYRQHYQQ 120

Query: 121 -----INNIGITEGEGVGILGNNDIGYPIYAQPQQQQQYNSNSGSLVNQGIDGSDLLFGN 180
                 +++      G+G+   N +    +   QQQQ YN+ +  L  Q           
Sbjct: 121 QVSTMTDDVPSQLELGIGMAPPNALSLFNHNPQQQQQPYNAAALPLSQQHSLPLSQQHSY 180

Query: 181 LNMNNGGIYVDNDDNNGLMLKELRIQQHYNDNYGINISNVDSMLMQSNLIPGAYPLQQEM 240
            N +    Y+D  D++  +   L IQ  Y  N     +N +S+ +QS LI  + PL  + 
Sbjct: 181 SNNSYNSPYMDVKDSS--VSNSLWIQHPYAIN-----NNANSLAIQSQLI-ASQPLTIQQ 240

Query: 241 EISHDYDDQIAFDTIADDRQSYIESKEACDS 266
           E+  DYD+   F    DDRQSYI+SKEA +S
Sbjct: 241 EVVQDYDEMHPFFDTIDDRQSYIDSKEAYES 263

[Close]

BLAST of MELO3C021964 vs. TrEMBL
Match: A0A068UF74_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022994001 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.4e-50
Identity = 118/265 (44.53%), Postives = 160/265 (60.38%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 60
           MT+KGGTSQACAACKYQRRRC+ DC LAPYFPADQPKMFQNAH+LFGV NI+K+L+Q+ P
Sbjct: 1   MTLKGGTSQACAACKYQRRRCTADCPLAPYFPADQPKMFQNAHKLFGVSNILKVLRQLDP 60

Query: 61  SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQI 120
           SQK   M SIIY++N+R ++P+HGC G+I QL YQIQ   EEL+ + +++   ++   Q 
Sbjct: 61  SQKLVAMKSIIYQANIRDKYPVHGCLGIIQQLWYQIQLAEEELQAIHAQLAFYRQHQQQE 120

Query: 121 NNIGITEGEGVGILGNNDIGYPIYAQPQQQQQYNSNSGSLVNQGIDGSDLLFGNLNMNNG 180
            + G+++      LG       +    Q   Q   N+ S +  G   +         N  
Sbjct: 121 VSTGLSDSISQLQLGMAPPSNALSLFHQDAPQNYDNTVSALPIGSHPTYSSNSANAANYN 180

Query: 181 GIYVDNDDNNGLMLKELRIQQHYNDNYGINISNVDSMLMQSNLIPGAYPLQQEMEISHDY 240
             Y+D+ +NN   +  L +QQ   +N   NI N + M+MQS LI     + Q+   + DY
Sbjct: 181 ATYMDSKENNA--VNSLWVQQPPYNNSSSNI-NSNPMVMQSQLINSQPLIIQQDCGTQDY 240

Query: 241 DDQIAFDTIADDRQSYIESKEACDS 266
           D+   F    DDRQSYI SKEA +S
Sbjct: 241 DEMHPFFDTIDDRQSYIASKEAYES 262

[Close]

BLAST of MELO3C021964 vs. TAIR10
Match: AT3G47870.1 (AT3G47870.1 LOB domain-containing protein 27)

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-42
Identity = 110/306 (35.95%), Postives = 156/306 (50.98%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 60
           MT+KGGTS ACAACKYQRRRC+ DC LAPYFPA+QPK+FQN HRLFGV +I+KIL+++  
Sbjct: 27  MTLKGGTSGACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDE 86

Query: 61  SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQ---- 120
           +QK E M SII++S +R R P+HGC GV  QL Y I    EEL+ V S++ + + Q    
Sbjct: 87  TQKPEAMKSIIFQSYVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQLQLYRSQPQNG 146

Query: 121 --------FNQ-INNIGITEGE------------GVGILGNNDIG----------YPIYA 180
                    NQ I+ +G    +            G+G+  NN+             P+  
Sbjct: 147 QNQNQNHNHNQMIHELGSDHNKQQEDVTSQQLDLGMGLNVNNNQSNVVTPFFSSLLPVSE 206

Query: 181 QPQQQQQYNSNSGSLVNQGID--------GSDLLFGNLNM-NNGGIYVDNDDNNGLMLKE 240
             Q Q  Y  +   + N G          G ++L  N N+  +   ++ N++N G    +
Sbjct: 207 TQQPQMSYTYSCSEVNNNGYSPPAYNTDSGKEILTNNNNVWGDQNRFLYNNNNGGGYSNQ 266

Query: 241 LRIQQHYNDNYGINISNVDSMLMQSNLIPGAYPLQQEMEISHDYDDQIAFDTIADDRQSY 263
                    N    +  + S L+   ++   +   +E E  H+YD+   F  I DDRQS+
Sbjct: 267 NESCHEMKSN---GVMAIQSQLVNLQMVSN-HQRVEEEEADHEYDELHQFLDIIDDRQSF 326

[Close]

BLAST of MELO3C021964 vs. TAIR10
Match: AT3G13850.1 (AT3G13850.1 LOB domain-containing protein 22)

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-30
Identity = 70/167 (41.92%), Postives = 102/167 (61.08%), Query Frame = 1


Query: 7   TSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHPSQKDET 66
           T+QACAACKYQRR+C+ DC LAPYFP D+ + F NAH+LFGV NI KI+K + P +KD  
Sbjct: 33  TNQACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKSLTPPEKDAA 92

Query: 67  MTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQIN----N 126
           M +I+++S+ R+  P+ GC G+I +L YQI+    EL  V  ++ M +++ +Q +    +
Sbjct: 93  MHTIMFQSDARANDPVDGCYGIIKKLQYQIEYTRNELEIVLQQLAMFRDRAHQHHHQEPH 152

Query: 127 IGITEGEGVG-------ILGNNDI--GYPI-YAQPQQQQQYNSNSGS 160
           I + E E +        +  NN I   YP+ + Q   QQQY S+  +
Sbjct: 153 IQMQEQEDLSSFSSSCDLNNNNSIPYNYPLNHIQEPNQQQYCSSGNN 199

[Close]

BLAST of MELO3C021964 vs. TAIR10
Match: AT1G65620.1 (AT1G65620.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-26
Identity = 50/119 (42.02%), Postives = 78/119 (65.55%), Query Frame = 1


Query: 7   TSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHPSQKDET 66
           T+  CAACK+ RR+C  +C  APYFP DQP+ F N H++FG  N+ K+L ++HPSQ+++ 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 67  MTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQINNIGI 126
           + S+ YE++MR R P++GC GVI  L +Q       LRQ++  +   K + ++  ++GI
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQ-------LRQLQIDLSCAKSELSKYQSLGI 117

[Close]

BLAST of MELO3C021964 vs. TAIR10
Match: AT1G72980.1 (AT1G72980.1 LOB domain-containing protein 7)

HSP 1 Score: 113.6 bits (283), Expect = 1.8e-25
Identity = 62/167 (37.13%), Postives = 90/167 (53.89%), Query Frame = 1


Query: 2   TIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHPS 61
           T  GG++ ACAACK+QR++C K+C LA YFP D    F NAH+LFGV NI K+LK++  S
Sbjct: 5   TFSGGSTTACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEES 64

Query: 62  QKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDM----VKEQF 121
           Q+D  M ++IY +N R+  P+ G    I  L  +I+ V  EL   R ++DM     +EQ 
Sbjct: 65  QRDIAMENLIYHANARALDPVGGVYRTICDLKCKIEFVQTELNLTRQQIDMCRSLAQEQH 124

Query: 122 NQINNI--------GITEGEGVGILGNNDIGYPIYAQPQQQQQYNSN 157
            Q  N+         + + +G   +  + + +    Q Q+ QQ   N
Sbjct: 125 RQRQNLPYRCNSFESLLQQDGDEYVNVDGLDHQNMQQQQEMQQQQQN 171

[Close]

BLAST of MELO3C021964 vs. TAIR10
Match: AT1G07900.1 (AT1G07900.1 LOB domain-containing protein 1)

HSP 1 Score: 108.2 bits (269), Expect = 7.7e-24
Identity = 55/146 (37.67%), Postives = 81/146 (55.48%), Query Frame = 1


Query: 11  CAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHPSQKDETMTSI 70
           CAACK  RRRC++ C LAPYFP   P  F  AHR+FG  NI+K L+++  SQ+ + + S+
Sbjct: 34  CAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSM 93

Query: 71  IYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQINNIGITEGEG 130
           +YE+  R R P++GC G I+ L  Q+ ++  +L   +++V+MV  QF + N + +     
Sbjct: 94  VYEAEARIRDPVYGCAGAIYHLQRQVSELQAQL--AKAQVEMVNMQFQRSNLLEL----- 153

Query: 131 VGILGNNDIGYPIYAQPQQQQQYNSN 157
                       IY   QQQ+Q   N
Sbjct: 154 ------------IYNMDQQQKQEQDN 160

[Close]

BLAST of MELO3C021964 vs. NCBI nr
Match: gi|700197259|gb|KGN52436.1| (hypothetical protein Csa_5G633830 [Cucumis sativus])

HSP 1 Score: 491.9 bits (1265), Expect = 7.1e-136
Identity = 242/272 (88.97%), Postives = 252/272 (92.65%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 60
           MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP
Sbjct: 28  MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 87

Query: 61  SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQI 120
           SQKDETMTSIIYESNMRSRFP+HGCCGVIWQLHYQIQQVAEELR VRSRVDMVKEQFNQ+
Sbjct: 88  SQKDETMTSIIYESNMRSRFPVHGCCGVIWQLHYQIQQVAEELRLVRSRVDMVKEQFNQM 147

Query: 121 NNIGITEGEGVGILGNNDIGYPIYAQPQQQQQYNS-----NSGSLVNQGIDGSDLLFGNL 180
           NNIGI+  E  G++GNND+ YPIY Q  QQQQYNS     NS SLVNQG D SDLLFGNL
Sbjct: 148 NNIGIS--ETAGVVGNNDVAYPIYTQQPQQQQYNSQQQQYNSASLVNQGTDASDLLFGNL 207

Query: 181 NMNNGGIYVDNDDNNGLMLKELRIQQHYNDNYGINISNVDSMLMQSNLIPG--AYPLQQE 240
           NMNNGGIYVDNDDNNGLMLKELRIQQHYNDNYGIN+SNVD+M+MQS+LIPG  AYPLQQE
Sbjct: 208 NMNNGGIYVDNDDNNGLMLKELRIQQHYNDNYGINMSNVDTMVMQSSLIPGVQAYPLQQE 267

Query: 241 MEISHDYDDQIAFDTIADDRQSYIESKEACDS 266
           MEISH YDDQIAFDTIADDRQSYIESKEACDS
Sbjct: 268 MEISHGYDDQIAFDTIADDRQSYIESKEACDS 297

[Close]

BLAST of MELO3C021964 vs. NCBI nr
Match: gi|659119507|ref|XP_008459693.1| (PREDICTED: LOB domain-containing protein 27-like [Cucumis melo])

HSP 1 Score: 349.4 bits (895), Expect = 5.7e-93
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 60
           MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP
Sbjct: 25  MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 84

Query: 61  SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQI 120
           SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQI
Sbjct: 85  SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFNQI 144

Query: 121 NNIGITEGEGVGILGNNDIGYPIYAQPQQQQQYNSNSGSLVNQGIDG 168
           NNIGITEGEGVGILGNNDIGYPIYAQPQQQQQYNSNSGSLVNQGIDG
Sbjct: 145 NNIGITEGEGVGILGNNDIGYPIYAQPQQQQQYNSNSGSLVNQGIDG 191

[Close]

BLAST of MELO3C021964 vs. NCBI nr
Match: gi|764598111|ref|XP_011466249.1| (PREDICTED: LOB domain-containing protein 27-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 267.3 bits (682), Expect = 2.8e-68
Identity = 147/268 (54.85%), Postives = 188/268 (70.15%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 60
           MTIKGGTSQACAACKYQRRRC+KDC LAP+FPADQ K FQNAHRL+GV NIMK+LKQ  P
Sbjct: 15  MTIKGGTSQACAACKYQRRRCTKDCELAPHFPADQLKQFQNAHRLYGVSNIMKVLKQTGP 74

Query: 61  SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQFN-Q 120
            +K+E M SIIYESNMR++FP+ GC G+I QL +Q+QQ  EELR VRS + + ++Q   Q
Sbjct: 75  GKKEEAMRSIIYESNMRAKFPVTGCMGIINQLTFQLQQAYEELRYVRSHLAICRDQCQYQ 134

Query: 121 INNIGITEGE-GVGILGNNDIGYPIYAQPQQQQQYNSNSGSLVNQGIDGSDLLFGNLNMN 180
            N+      +  +G+  N+     +Y Q  Q  QYNS +GS    G   S+ L   +N  
Sbjct: 135 YNSPTCPSSQLQLGLQTNDHEALQLYQQQYQYHQYNSAAGSSGGGGGGMSEYLANGIN-- 194

Query: 181 NGGIYVDNDDNNGLMLKELRIQQHYNDNYGINISNVDSMLMQSNLIPG-AYPLQQEMEIS 240
             G+Y+D +D+   ++K LR+QQ Y   YG N  NVD++ +Q NL+    +P+QQEM++ 
Sbjct: 195 --GLYIDENDS---VVKPLRVQQFY---YGNN--NVDAVAVQHNLMTSQGFPIQQEMDVP 254

Query: 241 HDYDDQIAFDTIADDRQSYIESKEACDS 266
           HDYDD I FDTIADDRQSYIESKEAC+S
Sbjct: 255 HDYDD-IPFDTIADDRQSYIESKEACES 269

[Close]

BLAST of MELO3C021964 vs. NCBI nr
Match: gi|694415260|ref|XP_009335812.1| (PREDICTED: LOB domain-containing protein 6-like [Pyrus x bretschneideri])

HSP 1 Score: 262.3 bits (669), Expect = 9.1e-67
Identity = 150/278 (53.96%), Postives = 191/278 (68.71%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 60
           MTIKGGTSQACAACKY RR+C+KDCALAP+FPADQP MFQNAHRL+GV NIMKILK+VHP
Sbjct: 1   MTIKGGTSQACAACKYHRRKCAKDCALAPHFPADQPMMFQNAHRLYGVSNIMKILKKVHP 60

Query: 61  SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQ---- 120
            Q++E MTSIIYESNMR++F + GC G+I QL++Q+QQ  EELR VR+ + + K+Q    
Sbjct: 61  EQEEEAMTSIIYESNMRAKFSVTGCMGIINQLNFQLQQALEELRYVRTHLAICKDQCQYR 120

Query: 121 --FNQINNIGITEGEGVGILGNNDIG-YPIYAQPQQQQQYNSN-SGSLVNQGIDGSDLLF 180
              +  +    +    +GI  N D     +Y Q Q   QY S  SG+    G  G     
Sbjct: 121 LPSSSPHYSSPSPQLQLGIPTNTDAATLTLYQQHQYPYQYASGASGASGASGASGGMSWV 180

Query: 181 GNLNMNNG--GIYVDNDDNNGLMLKELRIQQ-HYNDNYGINISNVDS-MLMQSNLIPG-A 240
           GN  + NG  G+Y+D++DN   M+K LR+Q  +YNDN      NV+  M +QS+L+   A
Sbjct: 181 GNEYLANGLNGVYIDDNDN---MVKTLRVQHPYYNDN------NVEQLMAVQSSLVSSQA 240

Query: 241 YPLQQEMEISHDYDDQIAFDTIADDRQSYIESKEACDS 266
           +P+ QEM++ HDYDD I FDTIADDRQSYIESKE C+S
Sbjct: 241 FPVHQEMDVPHDYDD-IPFDTIADDRQSYIESKEGCES 268

[Close]

BLAST of MELO3C021964 vs. NCBI nr
Match: gi|658012517|ref|XP_008341528.1| (PREDICTED: LOB domain-containing protein 27-like [Malus domestica])

HSP 1 Score: 261.2 bits (666), Expect = 2.0e-66
Identity = 149/277 (53.79%), Postives = 190/277 (68.59%), Query Frame = 1


Query: 1   MTIKGGTSQACAACKYQRRRCSKDCALAPYFPADQPKMFQNAHRLFGVCNIMKILKQVHP 60
           MTIKGGTSQACAACKY RR+C+KDCALAP+FPADQP MFQNAHRL+GV NIMKILK+VHP
Sbjct: 1   MTIKGGTSQACAACKYHRRKCAKDCALAPHFPADQPMMFQNAHRLYGVSNIMKILKKVHP 60

Query: 61  SQKDETMTSIIYESNMRSRFPIHGCCGVIWQLHYQIQQVAEELRQVRSRVDMVKEQ---- 120
            Q++E MTSIIYESNMR++F + GC G+I QL++Q+QQ  EELR VR+ + + K+Q    
Sbjct: 61  EQEEEAMTSIIYESNMRAKFSVTGCMGIINQLNFQLQQALEELRYVRTNLAICKDQCQYR 120

Query: 121 --FNQINNIGITEGEGVGILGNNDIG-YPIYAQPQQQQQYNSNSGSLVNQGIDGSDLLFG 180
              +  +    +    +GI  N D     +Y Q Q   QY S +      G  G     G
Sbjct: 121 LPSSSPHYSSPSPQLQLGIPTNTDAATLTLYQQHQYPYQYASGAA-----GASGGMSWVG 180

Query: 181 NLNMNNG--GIYVDNDDNNGLMLKELRIQQ-HYNDNYGINISNVDS-MLMQSNLIPG-AY 240
           N  + NG  G+Y+D++DN   M+K LR+Q  +YNDN      NV+  M +QS+L+   A+
Sbjct: 181 NEYLANGLNGVYIDDNDN---MVKPLRVQHPYYNDN------NVEQLMAVQSSLVSSQAF 240

Query: 241 PLQQEMEISHDYDDQIAFDTIADDRQSYIESKEACDS 266
           P+ QEM++ HDYDD I FDTIADDRQSYIESKEAC+S
Sbjct: 241 PVHQEMDVPHDYDD-IPFDTIADDRQSYIESKEACES 262

The following BLAST results are available for this feature:

BLAST of MELO3C021964 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LBD27_ARATH	2.3e-41	35.95	LOB domain-containing protein 27 OS=Arabidopsis thaliana GN=LBD27 PE=2 SV=1	[more]
LBD22_ARATH	5.8e-29	41.92	LOB domain-containing protein 22 OS=Arabidopsis thaliana GN=LBD22 PE=2 SV=1	[more]
LBD6_ARATH	3.0e-25	42.02	LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1	[more]
IAL1_MAIZE	6.6e-25	43.24	Protein IAL1 OS=Zea mays PE=2 SV=1	[more]
LBD6_MAIZE	1.5e-24	43.24	LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1	[more]

BLAST of MELO3C021964 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXA1_CUCSA	4.9e-136	88.97	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G633830 PE=4 SV=1	[more]
M5WV19_PRUPE	7.8e-65	51.45	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023282mg PE=4 SV=1	[more]
A0A068V2V3_COFCA	2.2e-51	45.35	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00042384001 PE=4 SV=1	[more]
V4TMK4_9ROSI	1.1e-50	44.65	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021399mg PE=4 SV=1	[more]
A0A068UF74_COFCA	5.4e-50	44.53	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00022994001 PE=4 SV=1	[more]

BLAST of MELO3C021964 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G47870.1	1.3e-42	35.95	LOB domain-containing protein 27	[more]
AT3G13850.1	3.2e-30	41.92	LOB domain-containing protein 22	[more]
AT1G65620.1	1.7e-26	42.02	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G72980.1	1.8e-25	37.13	LOB domain-containing protein 7	[more]
AT1G07900.1	7.7e-24	37.67	LOB domain-containing protein 1	[more]

BLAST of MELO3C021964 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700197259\|gb\|KGN52436.1\|	7.1e-136	88.97	hypothetical protein Csa_5G633830 [Cucumis sativus]	[more]
gi\|659119507\|ref\|XP_008459693.1\|	5.7e-93	100.00	PREDICTED: LOB domain-containing protein 27-like [Cucumis melo]	[more]
gi\|764598111\|ref\|XP_011466249.1\|	2.8e-68	54.85	PREDICTED: LOB domain-containing protein 27-like [Fragaria vesca subsp. vesca]	[more]
gi\|694415260\|ref\|XP_009335812.1\|	9.1e-67	53.96	PREDICTED: LOB domain-containing protein 6-like [Pyrus x bretschneideri]	[more]
gi\|658012517\|ref\|XP_008341528.1\|	2.0e-66	53.79	PREDICTED: LOB domain-containing protein 27-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004883	LOB

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016758	transferase activity, transferring hexosyl groups

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021964T1	MELO3C021964T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	DUF260	coord: 10..107 score: 6.2
IPR004883	Lateral organ boundaries, LOB	PROFILE	PS50891	LOB	coord: 9..110 score: 2
None	No IPR available	unknown	Coil	Coil	coord: 96..116 scor
None	No IPR available	PANTHER	PTHR31301	FAMILY NOT NAMED	coord: 4..262 score: 1.6
None	No IPR available	PANTHER	PTHR31301:SF21	LOB DOMAIN-CONTAINING PROTEIN 27	coord: 4..262 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C021964	Csa5G633830	Cucumber (Chinese Long) v2	cumeB358
MELO3C021964	Cla010351	Watermelon (97103) v1	mewmB003
MELO3C021964	ClCG09G018450	Watermelon (Charleston Gray)	mewcgB002
MELO3C021964	Cla97C09G179870	Watermelon (97103) v2	mewmbB038
MELO3C021964	Bhi06G000369	Wax gourd	mewgoB022
MELO3C021964	CSPI05G28720	Wild cucumber (PI 183967)	cpimeB349
MELO3C021964	Cucsa.158540	Cucumber (Gy14) v1	cgymeB265
MELO3C021964	CmaCh04G027460	Cucurbita maxima (Rimu)	cmameB634
MELO3C021964	CmaCh15G002870	Cucurbita maxima (Rimu)	cmameB251
MELO3C021964	Lsi02G015060	Bottle gourd (USVL1VR-Ls)	lsimeB162
MELO3C021964	Cp4.1LG13g08610	Cucurbita pepo (Zucchini)	cpemeB155
MELO3C021964	Cp4.1LG01g23000	Cucurbita pepo (Zucchini)	cpemeB358
MELO3C021964	CsGy5G028050	Cucumber (Gy14) v2	cgybmeB299
MELO3C021964	Carg04402	Silver-seed gourd	carmeB0682
MELO3C021964	Carg02264	Silver-seed gourd	carmeB0260
MELO3C021964	CsaV3_5G037790	Cucumber (Chinese Long) v3	cucmeB358

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021964	Watermelon (97103) v2	mewmbB011
MELO3C021964	Watermelon (97103) v2	mewmbB014
MELO3C021964	Watermelon (97103) v2	mewmbB026
MELO3C021964	Wax gourd	mewgoB046
MELO3C021964	Melon (DHL92) v3.5.1	memeB005
MELO3C021964	Melon (DHL92) v3.5.1	memeB012
MELO3C021964	Melon (DHL92) v3.5.1	memeB014
MELO3C021964	Cucumber (Gy14) v1	cgymeB114
MELO3C021964	Cucumber (Gy14) v1	cgymeB472
MELO3C021964	Cucumber (Gy14) v1	cgymeB550
MELO3C021964	Cucurbita moschata (Rifu)	cmomeB239
MELO3C021964	Cucurbita moschata (Rifu)	cmomeB624
MELO3C021964	Cucurbita moschata (Rifu)	cmomeB630
MELO3C021964	Wild cucumber (PI 183967)	cpimeB000
MELO3C021964	Wild cucumber (PI 183967)	cpimeB165
MELO3C021964	Wild cucumber (PI 183967)	cpimeB354
MELO3C021964	Cucumber (Chinese Long) v2	cumeB005
MELO3C021964	Cucumber (Chinese Long) v2	cumeB174
MELO3C021964	Watermelon (Charleston Gray)	mewcgB007
MELO3C021964	Watermelon (Charleston Gray)	mewcgB029
MELO3C021964	Watermelon (97103) v1	mewmB008
MELO3C021964	Watermelon (97103) v1	mewmB021
MELO3C021964	Cucurbita pepo (Zucchini)	cpemeB467
MELO3C021964	Bottle gourd (USVL1VR-Ls)	lsimeB163
MELO3C021964	Cucumber (Gy14) v2	cgybmeB001
MELO3C021964	Cucumber (Chinese Long) v3	cucmeB000
MELO3C021964	Cucumber (Chinese Long) v3	cucmeB167