MELO3C021929 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGAGTTGGAGCAAAATTTGGAATGTTTTCAATAATAGTCATTACAAAATAAATGACTGACTCAACTCGTTCCGAGTTTAACCGAGTCCAAAATAAAAAATCCGAGTCTAAATCGAGACGAGTTACGATGAGTCACCATGGGCCACCCTCTTCCATCCGCTGGTTCAACTTTTAGGTCAAGTTGAGTTTTCTTTTCGCTTTTTCCTTTTAATTCCTTTTTCTTTTCTTTTTTTTAATGGGTTTTTAATTTTAATTATTAATTCGGAGAAACGGAATTTGACTGCAAGAAGAAGAATCAGTGGAAGACGGGCAAGTAGATCTGAAAGTTCATACAAACAGAGCCTCATACGCCGGAGATTGAGGGAGAAAAATCCGGGGACGGTCGGCCGATTGTTTGTGGATTTGAACAAAATNNNNNNNNNNNNNNNNNNNNAACAGAACCGGAGATTTTTTTTGAATCGTTATGCTGAATGACTGATTTTTCAGCTTTCCGAACGGGCGGTTTCAAAAGGAAAATGCCGCGCCCTCATTTTCACAAGCTTGTTCTTTCCTCAACTATCCAAGCTAGGAAATTGGTACCCTTTTGATCCTTTTTTCTTTTTGTTTTATTTTTTCTGGGTTTTGCTTCTTTTGCTTGATTATCGAGAAGAATCGGGCTAAACTTCGTTTCTGTTCTTTTTGTTTTTTTTTTTTTTTTTTGGACTTCATCTACTATTGCTTCTTCTGTATCTTCTGCTGAGTTCTTTTGCTCTAACAACGAATTTTCTTATGGATTAAAGCTAAAACCCTGAGTTCTATGTTTGTTTTAATCAAGGAAGAAGGAAAAAATTATTGGGCTATACTCGAATTTCTCGATGATTTACTTACTTCTCTGTTTATTAGTTTTGATTAATCGAAGAAGTTGTTTCGTCGTACTAGGTCAGACTTAAAAATTTTCATTTCATTGTCTGTCAGTCTGCTACCGATATGTACGACTATTATTATTGAATTCGGAGCTGAAACCTTCATTATTTTAGCCTGTTAATCATGTTTCTAAAGTGTCTTTTTGTTAGTAAATAAAAATGAAATGGAAGAAGTTATCTCCAGGGCTGGAAATGGTTTTTTTGTGTTAGTTTCGTGTTGCATTGGTTATGCTTTCAAAAGGGTTTCCTTGTCAGTTGCATGATTAGGCAGGATATGTTTACTTCAGCTAGAAATCACTTGGTAGTAAAATCCCAGTTTTCTGTAGGCTTGTTTTAACTGAACATTCTCAATTTTAGATTCCCGCTCTTCATGTTCTTGCTTCTCTGCTTTTGGTGCTTGCTTTTTGGGTTTGTTCTAATTTGACGTACATGATATAGCTGTATCATAGACGATAATTGTGAACAAAATATTTTCATTTTTCTTTTACTGATTTGTTTAATCTTTTCGAGATTTTCAATTGAAATGCTTGGTTCTCTAAGAACCTTCAAGTATAATGACTATTCTTTCATTGCTAAGCTTTGAATATCATTTAGATAATAAATCAGTTAGGATTTTGTTTTCATATACAGATACTCTCTTGAAATATCTTGTCAATTGTTAATTGTGGAGTATATGGTCCGTATCTTCATTCTTCATTGCATTCTTTAAACTTTGAACTTAATTCCTTGGTAACTAGTTCTTTAATATCTTTCCATTGTTTCTTTGTGCTGGATTAGTCTAGAGGAACAGTTGGATCTTGACAAAAGTGAGAAAACATTATACTCCTTCTGTTGTATTGTTATTCTCGATGTACATTATTTTAGATTTTGTTTGCACTTCATGTTAGTTTGCTACTTTGTGATTGTTTGTTTCTTATAACGCACTTTATTTATGCTGTGGTTTGTTTTTTCTTGGTTTCTTTTTGGCTTGGGCTCTCCTTGCCTCTCTCTCTTTGGCATTGTTTTTATTCTTACCTATGTCACAATGAAAGTTGTTTTCATCTAAAAAGGGTCTGGTTTTACGTAGCCCATGTACGTAATAATATTTGTCGTTGGCTACAATCCCTTTATAGAATTCCTTTGTTTCTTTATTCATAATTCAAGTATTTTAATACGTTCCCGTTTCAATAAGGAACTATTTCCCTACGATTTAATTTGATGAATCGTCATGCCACTGCAGTCATCTTGTCATATAAGTCCATTTGTTGGACTGGAGTTAAGTTTCTATATTATCATTCATTTGCATTGCATGATCCCTTCCTTGCTCAATATTTTTGCAGAGACTCCCAGAAACTTTTGTGAGGTTGATCAGGGATGAGCTTTCAGCAGTTGCAACCCTTACTGTTCCTGATGGCCATGTTTGGCGTGTAGGTTTGAGGAAAGCCGACAATAAATTTTGGTTTGAAGATGGATGGCAAGGATTTCTTGAGCATTACTCCATACGGGTTGGGTATTTACTAGTATTCAGATACGAGGGAAACTCAGCGTTCTGTGTTTTTATCTTTAATCTTAATACATCTGAAATAAACTATCAATCGGCTGCTCTCAGTAGTAATCAAAGGAATAATTACAGCATTCAAAATCGAATCTTTGAAGAAATGGAGGATTATGATATTCCCGAAGCCATTCCTTCCAATCAGTCCATGAATTCCGGTTCCTTGCGGAATAAGCTATTTGGTGACGAATGGAATCTGCACCAATCAAAATCTGCAAGTACGTTGCAAGCTGAGTATTTATCCACTAGAGATATTGGGGTTCAGTTTAGTGCTGTGGAGATTAAAAAATCTGCAGATGAGGTGAGATTCCAGAATTTGGGTGATGATGCAGCACACAGGGTTAAAAAGAGTGGAAGCAAAAAGCGGAAAATCGAGTCTAGTAAGCTTCTGTCTTATCGCTTCACAGTTTGTACTGTAAATGTTTGAATTATCTTACCCAGTATTTTTTGAACTGCAGGCGAGCACCATCCATCTGCTCATAATAGTGAAGATTTAGGAGACATTCGTTTTAGATTTTATGAAAGTGCTTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGCTATCAACTCTGCAAAAGCTTTCGAGCCCGGTAATCCTTTCTGCAGAGTCGTCTTGCGACCATCCTATCTATATAGAGGTTGCATAATGGTAAGATATTGAGGCTGAAATTTATCATATGAAAGCTTTTAAATTGAATCATGTGAGCCCTAAAAAGGGTATTCTGCACTCTCCTTTACAGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCGGGATTCATCAAACTTCAGACACCTGATGGGAGACAGTGGCCGGTCCGATGTCTTTATAAAGTTGGTAGAGCGAAGTTAAGTCAGGGATGGTATGAGTTTTGCCTGGAAAATAATTTAGGGGAGGGCGACGTTTGTGTGTTTGAGCTTCTTAGGATGAGAGAAATTGTACTCAAAGTTACCATGTTTCGTGTCATTGAAGAAGGCGGACGAATGGCAAACCCAAATCCTGCTAGCATGATGAATCCACCTCCGCTGCGAAGTGTTAGCCACATTAAGCTGATCAGAAATTAATGGACGATATTTCCAGGTTACCCTTTTGTATCAAATCTATCTCTTTTTTTTTTTTTTTGTGGTAGCCTGTTGATTCTGATCCCTTGTGGAATTAGCTGTTGTTTGGTGTTTATAATCTTTCGAGATTGACTTAAGTTGGAAAAGAAAAGGATCCGTTTAGAGTTTACGTATTAAAGCTGTATTGACTTTAGTTGTATATAGATTTTCAAATTTTTGTTGATATCAATCTAGACAAGAACATCAGCAAGTGTTTGTTTTGG AGAAGAGTTGGAGCAAAATTTGGAATGTTTTCAATAATAGTCATTACAAAATAAATGACTGACTCAACTCGTTCCGAGTTTAACCGAGTCCAAAATAAAAAATCCGAGTCTAAATCGAGACGAGTTACGATGAGTCACCATGGGCCACCCTCTTCCATCCGCTGGTTCAACTTTTAGGTCAAGTTGAGTTTTCTTTTCGCTTTTTCCTTTTAATTCCTTTTTCTTTTCTTTTTTTTAATGGGTTTTTAATTTTAATTATTAATTCGGAGAAACGGAATTTGACTGCAAGAAGAAGAATCAGTGGAAGACGGGCAAGTAGATCTGAAAGTTCATACAAACAGAGCCTCATACGCCGGAGATTGAGGGAGAAAAATCCGGGGACGGTCGGCCGATTGTTTGTGGATTTGAACAAAATNNNNNNNNNNNNNNNNNNNNAACAGAACCGGAGATTTTTTTTGAATCGTTATGCTGAATGACTGATTTTTCAGCTTTCCGAACGGGCGGTTTCAAAAGGAAAATGCCGCGCCCTCATTTTCACAAGCTTGTTCTTTCCTCAACTATCCAAGCTAGGAAATTGAGACTCCCAGAAACTTTTGTGAGGTTGATCAGGGATGAGCTTTCAGCAGTTGCAACCCTTACTGTTCCTGATGGCCATGTTTGGCGTGTAGGTTTGAGGAAAGCCGACAATAAATTTTGGTTTGAAGATGGATGGCAAGGATTTCTTGAGCATTACTCCATACGGGTTGGGTATTTACTAGTATTCAGATACGAGGGAAACTCAGCGTTCTGTGTTTTTATCTTTAATCTTAATACATCTGAAATAAACTATCAATCGGCTGCTCTCAGTAGTAATCAAAGGAATAATTACAGCATTCAAAATCGAATCTTTGAAGAAATGGAGGATTATGATATTCCCGAAGCCATTCCTTCCAATCAGTCCATGAATTCCGGTTCCTTGCGGAATAAGCTATTTGGTGACGAATGGAATCTGCACCAATCAAAATCTGCAAGTACGTTGCAAGCTGAGTATTTATCCACTAGAGATATTGGGGTTCAGTTTAGTGCTGTGGAGATTAAAAAATCTGCAGATGAGGTGAGATTCCAGAATTTGGGTGATGATGCAGCACACAGGGTTAAAAAGAGTGGAAGCAAAAAGCGGAAAATCGAGTCTAGCGAGCACCATCCATCTGCTCATAATAGTGAAGATTTAGGAGACATTCGTTTTAGATTTTATGAAAGTGCTTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGCTATCAACTCTGCAAAAGCTTTCGAGCCCGGTAATCCTTTCTGCAGAGTCGTCTTGCGACCATCCTATCTATATAGAGGTTGCATAATGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCGGGATTCATCAAACTTCAGACACCTGATGGGAGACAGTGGCCGGTCCGATGTCTTTATAAAGTTGGTAGAGCGAAGTTAAGTCAGGGATGGTATGAGTTTTGCCTGGAAAATAATTTAGGGGAGGGCGACGTTTGTGTGTTTGAGCTTCTTAGGATGAGAGAAATTGTACTCAAAGTTACCATGTTTCGTGTCATTGAAGAAGGCGGACGAATGGCAAACCCAAATCCTGCTAGCATGATGAATCCACCTCCGCTGCGAAGTGTTAGCCACATTAAGCTGATCAGAAATTAATGGACGATATTTCCAGGTTACCCTTTTGTATCAAATCTATCTCTTTTTTTTTTTTTTTGTGGTAGCCTGTTGATTCTGATCCCTTGTGGAATTAGCTGTTGTTTGGTGTTTATAATCTTTCGAGATTGACTTAAGTTGGAAAAGAAAAGGATCCGTTTAGAGTTTACGTATTAAAGCTGTATTGACTTTAGTTGTATATAGATTTTCAAATTTTTGTTGATATCAATCTAGACAAGAACATCAGCAAGTGTTTGTTTTGG ATGACTGATTTTTCAGCTTTCCGAACGGGCGGTTTCAAAAGGAAAATGCCGCGCCCTCATTTTCACAAGCTTGTTCTTTCCTCAACTATCCAAGCTAGGAAATTGAGACTCCCAGAAACTTTTGTGAGGTTGATCAGGGATGAGCTTTCAGCAGTTGCAACCCTTACTGTTCCTGATGGCCATGTTTGGCGTGTAGGTTTGAGGAAAGCCGACAATAAATTTTGGTTTGAAGATGGATGGCAAGGATTTCTTGAGCATTACTCCATACGGGTTGGGTATTTACTAGTATTCAGATACGAGGGAAACTCAGCGTTCTGTGTTTTTATCTTTAATCTTAATACATCTGAAATAAACTATCAATCGGCTGCTCTCAGTAGTAATCAAAGGAATAATTACAGCATTCAAAATCGAATCTTTGAAGAAATGGAGGATTATGATATTCCCGAAGCCATTCCTTCCAATCAGTCCATGAATTCCGGTTCCTTGCGGAATAAGCTATTTGGTGACGAATGGAATCTGCACCAATCAAAATCTGCAAGTACGTTGCAAGCTGAGTATTTATCCACTAGAGATATTGGGGTTCAGTTTAGTGCTGTGGAGATTAAAAAATCTGCAGATGAGGTGAGATTCCAGAATTTGGGTGATGATGCAGCACACAGGGTTAAAAAGAGTGGAAGCAAAAAGCGGAAAATCGAGTCTAGCGAGCACCATCCATCTGCTCATAATAGTGAAGATTTAGGAGACATTCGTTTTAGATTTTATGAAAGTGCTTCTGCTAGAAAGAGAACTGTGACAGCAGAAGAAAGAGAAAGAGCTATCAACTCTGCAAAAGCTTTCGAGCCCGGTAATCCTTTCTGCAGAGTCGTCTTGCGACCATCCTATCTATATAGAGGTTGCATAATGTATTTGCCATCTTGCTTTGCTGAAAAGAATCTAAGTGGGGTTTCGGGATTCATCAAACTTCAGACACCTGATGGGAGACAGTGGCCGGTCCGATGTCTTTATAAAGTTGGTAGAGCGAAGTTAAGTCAGGGATGGTATGAGTTTTGCCTGGAAAATAATTTAGGGGAGGGCGACGTTTGTGTGTTTGAGCTTCTTAGGATGAGAGAAATTGTACTCAAAGTTACCATGTTTCGTGTCATTGAAGAAGGCGGACGAATGGCAAACCCAAATCCTGCTAGCATGATGAATCCACCTCCGCTGCGAAGTGTTAGCCACATTAAGCTGATCAGAAATTAA MTDFSAFRTGGFKRKMPRPHFHKLVLSSTIQARKLRLPETFVRLIRDELSAVATLTVPDGHVWRVGLRKADNKFWFEDGWQGFLEHYSIRVGYLLVFRYEGNSAFCVFIFNLNTSEINYQSAALSSNQRNNYSIQNRIFEEMEDYDIPEAIPSNQSMNSGSLRNKLFGDEWNLHQSKSASTLQAEYLSTRDIGVQFSAVEIKKSADEVRFQNLGDDAAHRVKKSGSKKRKIESSEHHPSAHNSEDLGDIRFRFYESASARKRTVTAEERERAINSAKAFEPGNPFCRVVLRPSYLYRGCIMYLPSCFAEKNLSGVSGFIKLQTPDGRQWPVRCLYKVGRAKLSQGWYEFCLENNLGEGDVCVFELLRMREIVLKVTMFRVIEEGGRMANPNPASMMNPPPLRSVSHIKLIRN*
BLAST of MELO3C021929 vs. Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 3.8e-104 Identity = 209/367 (56.95%), Postives = 246/367 (67.03%), Query Frame = 1
BLAST of MELO3C021929 vs. Swiss-Prot
Match: REM19_ARATH (B3 domain-containing protein REM19 OS=Arabidopsis thaliana GN=REM19 PE=1 SV=1) HSP 1 Score: 226.5 bits (576), Expect = 5.4e-58 Identity = 115/162 (70.99%), Postives = 128/162 (79.01%), Query Frame = 1
BLAST of MELO3C021929 vs. Swiss-Prot
Match: Y1176_ORYSJ (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica GN=Os11g0197600 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 9.0e-21 Identity = 97/391 (24.81%), Postives = 166/391 (42.46%), Query Frame = 1
BLAST of MELO3C021929 vs. Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.3e-16 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 1
BLAST of MELO3C021929 vs. Swiss-Prot
Match: Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.5e-15 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 1
BLAST of MELO3C021929 vs. TrEMBL
Match: A0A0A0LIK1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G237690 PE=4 SV=1) HSP 1 Score: 832.4 bits (2149), Expect = 2.4e-238 Identity = 406/412 (98.54%), Postives = 412/412 (100.00%), Query Frame = 1
BLAST of MELO3C021929 vs. TrEMBL
Match: W9R1E8_9ROSA (B3 domain-containing transcription factor VRN1 OS=Morus notabilis GN=L484_027003 PE=4 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 2.3e-132 Identity = 269/479 (56.16%), Postives = 310/479 (64.72%), Query Frame = 1
BLAST of MELO3C021929 vs. TrEMBL
Match: M5W2Q1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006275mg PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 6.3e-130 Identity = 254/433 (58.66%), Postives = 314/433 (72.52%), Query Frame = 1
BLAST of MELO3C021929 vs. TrEMBL
Match: A0A067LCQ1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10017 PE=4 SV=1) HSP 1 Score: 458.8 bits (1179), Expect = 7.2e-126 Identity = 243/409 (59.41%), Postives = 288/409 (70.42%), Query Frame = 1
BLAST of MELO3C021929 vs. TrEMBL
Match: V7AEE9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_011G050600g PE=4 SV=1) HSP 1 Score: 455.3 bits (1170), Expect = 8.0e-125 Identity = 246/438 (56.16%), Postives = 311/438 (71.00%), Query Frame = 1
BLAST of MELO3C021929 vs. TAIR10
Match: AT3G18990.1 (AT3G18990.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 379.8 bits (974), Expect = 2.2e-105 Identity = 209/367 (56.95%), Postives = 246/367 (67.03%), Query Frame = 1
BLAST of MELO3C021929 vs. TAIR10
Match: AT1G49480.1 (AT1G49480.1 related to vernalization1 1) HSP 1 Score: 226.5 bits (576), Expect = 3.0e-59 Identity = 115/162 (70.99%), Postives = 128/162 (79.01%), Query Frame = 1
BLAST of MELO3C021929 vs. TAIR10
Match: AT4G01580.1 (AT4G01580.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 89.0 bits (219), Expect = 7.6e-18 Identity = 43/103 (41.75%), Postives = 60/103 (58.25%), Query Frame = 1
BLAST of MELO3C021929 vs. TAIR10
Match: AT3G18960.1 (AT3G18960.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 85.5 bits (210), Expect = 8.4e-17 Identity = 50/149 (33.56%), Postives = 75/149 (50.34%), Query Frame = 1
BLAST of MELO3C021929 vs. TAIR10
Match: AT1G49475.1 (AT1G49475.1 AP2/B3-like transcriptional factor family protein) HSP 1 Score: 72.8 bits (177), Expect = 5.6e-13 Identity = 44/139 (31.65%), Postives = 66/139 (47.48%), Query Frame = 1
BLAST of MELO3C021929 vs. NCBI nr
Match: gi|659118658|ref|XP_008459235.1| (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis melo]) HSP 1 Score: 837.8 bits (2163), Expect = 8.2e-240 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 1
BLAST of MELO3C021929 vs. NCBI nr
Match: gi|778669195|ref|XP_004145349.2| (PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis sativus]) HSP 1 Score: 832.4 bits (2149), Expect = 3.4e-238 Identity = 406/412 (98.54%), Postives = 412/412 (100.00%), Query Frame = 1
BLAST of MELO3C021929 vs. NCBI nr
Match: gi|1009115456|ref|XP_015874240.1| (PREDICTED: B3 domain-containing transcription factor VRN1-like [Ziziphus jujuba]) HSP 1 Score: 508.1 bits (1307), Expect = 1.5e-140 Identity = 270/444 (60.81%), Postives = 322/444 (72.52%), Query Frame = 1
BLAST of MELO3C021929 vs. NCBI nr
Match: gi|1009168458|ref|XP_015902669.1| (PREDICTED: B3 domain-containing transcription factor VRN1-like [Ziziphus jujuba]) HSP 1 Score: 507.3 bits (1305), Expect = 2.5e-140 Identity = 270/446 (60.54%), Postives = 322/446 (72.20%), Query Frame = 1
BLAST of MELO3C021929 vs. NCBI nr
Match: gi|703098004|ref|XP_010096266.1| (B3 domain-containing transcription factor VRN1 [Morus notabilis]) HSP 1 Score: 480.3 bits (1235), Expect = 3.3e-132 Identity = 269/479 (56.16%), Postives = 310/479 (64.72%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |