MELO3C021911 (gene) Melon (DHL92) v3.5.1

NameMELO3C021911
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionHfr-2-like protein
Locationchr11 : 5238387 .. 5238653 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACAACAACGAAGGAGAGATCAATGATGAGTGAACGACTTTCGAAATCAATGATGCGCGAGTCATCGACGACGAATATGAAGGAGAATGAACCATCTTCCAGTCGTGAAATCGGTTATGAAAAAGCCAAAAAGAAAGCTAATACAGAAGATAACAATGGCGACGAAAACAAATTCAAGAAAGTCAAAATGTCGGTCTTCAATAGCGAGGATCCTAACTCGTGGTTGTTCCGTACTCAACACAAGCTGTGTTTACTCCCTTAA

mRNA sequence

ATGGAAACAACAACGAAGGAGAGATCAATGATGAGTGAACGACTTTCGAAATCAATGATGCGCGAGTCATCGACGACGAATATGAAGGAGAATGAACCATCTTCCAGTCGTGAAATCGGTTATGAAAAAGCCAAAAAGAAAGCTAATACAGAAGATAACAATGGCGACGAAAACAAATTCAAGAAAGTCAAAATGTCGGTCTTCAATAGCGAGGATCCTAACTCGTGGTTGTTCCGTACTCAACACAAGCTGTGTTTACTCCCTTAA

Coding sequence (CDS)

ATGGAAACAACAACGAAGGAGAGATCAATGATGAGTGAACGACTTTCGAAATCAATGATGCGCGAGTCATCGACGACGAATATGAAGGAGAATGAACCATCTTCCAGTCGTGAAATCGGTTATGAAAAAGCCAAAAAGAAAGCTAATACAGAAGATAACAATGGCGACGAAAACAAATTCAAGAAAGTCAAAATGTCGGTCTTCAATAGCGAGGATCCTAACTCGTGGTTGTTCCGTACTCAACACAAGCTGTGTTTACTCCCTTAA

Protein sequence

METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKFKKVKMSVFNSEDPNSWLFRTQHKLCLLP*
BLAST of MELO3C021911 vs. NCBI nr
Match: gi|659131694|ref|XP_008465807.1| (PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 5.5e-16
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 1

Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSS------REIGYEKAKKKANTEDNN 60
           ME+  KERSMMSERL++S +R+ STT  K+NE +SS      R IG  + ++K++ ++N 
Sbjct: 59  MESNAKERSMMSERLTESAVRDKSTTKGKKNEATSSCDIGADRNIGEGRNERKSDNDENA 118

Query: 61  GDENKFKKVKMSVFNSEDPNSWLFRTQ 82
           GD NKFKKVKM +FN ED +SWLFR +
Sbjct: 119 GDRNKFKKVKMPIFNGEDLDSWLFRVE 145

BLAST of MELO3C021911 vs. NCBI nr
Match: gi|659131696|ref|XP_008465808.1| (PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X2 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 5.5e-16
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 1

Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSS------REIGYEKAKKKANTEDNN 60
           ME+  KERSMMSERL++S +R+ STT  K+NE +SS      R IG  + ++K++ ++N 
Sbjct: 59  MESNAKERSMMSERLTESAVRDKSTTKGKKNEATSSCDIGADRNIGEGRNERKSDNDENA 118

Query: 61  GDENKFKKVKMSVFNSEDPNSWLFRTQ 82
           GD NKFKKVKM +FN ED +SWLFR +
Sbjct: 119 GDRNKFKKVKMPIFNGEDLDSWLFRVE 145

BLAST of MELO3C021911 vs. NCBI nr
Match: gi|659131700|ref|XP_008465811.1| (PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X4 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 5.5e-16
Identity = 46/87 (52.87%), Postives = 63/87 (72.41%), Query Frame = 1

Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSS------REIGYEKAKKKANTEDNN 60
           ME+  KERSMMSERL++S +R+ STT  K+NE +SS      R IG  + ++K++ ++N 
Sbjct: 59  MESNAKERSMMSERLTESAVRDKSTTKGKKNEATSSCDIGADRNIGEGRNERKSDNDENA 118

Query: 61  GDENKFKKVKMSVFNSEDPNSWLFRTQ 82
           GD NKFKKVKM +FN ED +SWLFR +
Sbjct: 119 GDRNKFKKVKMPIFNGEDLDSWLFRVE 145

BLAST of MELO3C021911 vs. NCBI nr
Match: gi|659134102|ref|XP_008467029.1| (PREDICTED: uncharacterized protein LOC103504456, partial [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 6.9e-11
Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 1

Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEKAKKKANTEDNNGDENKF 60
           ME   KERSM  ER+++S  + S T   K ++ SSSR++  E   KK   ++N+ D +KF
Sbjct: 59  MEMNAKERSMAGERMNESDTQNSPTVKSKNDKASSSRDVE-EINTKKNEPDENSNDRSKF 118

Query: 61  KKVKMSVFNSEDPNSWLFRTQ-----HKL 85
           KKV+M VF  EDP SWLFR +     HKL
Sbjct: 119 KKVEMPVFTGEDPESWLFRAERYFQIHKL 146

BLAST of MELO3C021911 vs. NCBI nr
Match: gi|659119521|ref|XP_008459701.1| (PREDICTED: uncharacterized protein LOC103498741 [Cucumis melo])

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-09
Identity = 34/87 (39.08%), Postives = 59/87 (67.82%), Query Frame = 1

Query: 1   METTTKERSMMSERLSKSMMRESSTTNMKENEPSSSREIGYEK------AKKKANTEDNN 60
           +ET++KERSMMS + ++  ++E      KE++ SSSR I  ++      ++++ +++D+ 
Sbjct: 59  IETSSKERSMMSGQATEPTVKEFEKAKGKESDASSSRMIESDRNFRADGSERRNDSDDSF 118

Query: 61  GDENKFKKVKMSVFNSEDPNSWLFRTQ 82
            D NKFKK++M +F  EDP+SWLFR +
Sbjct: 119 PDRNKFKKIEMPIFTGEDPDSWLFRAE 145

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659131694|ref|XP_008465807.1|5.5e-1652.87PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X1 [Cucumis melo][more]
gi|659131696|ref|XP_008465808.1|5.5e-1652.87PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X2 [Cucumis melo][more]
gi|659131700|ref|XP_008465811.1|5.5e-1652.87PREDICTED: histone-lysine N-methyltransferase ASHR1 isoform X4 [Cucumis melo][more]
gi|659134102|ref|XP_008467029.1|6.9e-1146.07PREDICTED: uncharacterized protein LOC103504456, partial [Cucumis melo][more]
gi|659119521|ref|XP_008459701.1|1.7e-0939.08PREDICTED: uncharacterized protein LOC103498741 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021911T1MELO3C021911T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None