MELO3C021861 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021861
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDnaJ/Hsp40 cysteine-rich domain superfamily protein
Locationchr11 : 6285886 .. 6286041 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGAGGATGATCCTATCGAGAAAGATGATGAGTCTATCGACTTTTGCATTGAAGATGACGATGATGATTCTATCGACTGTAACCGCATTGAAGATGAAGATGATGATCCTATTAGTTTCGACCGCTTCAAAGATAAAGATGATGATCCATGA

mRNA sequence

ATGGAAGAGGATGATCCTATCGAGAAAGATGATGAGTCTATCGACTTTTGCATTGAAGATGACGATGATGATTCTATCGACTGTAACCGCATTGAAGATGAAGATGATGATCCTATTAGTTTCGACCGCTTCAAAGATAAAGATGATGATCCATGA

Coding sequence (CDS)

ATGGAAGAGGATGATCCTATCGAGAAAGATGATGAGTCTATCGACTTTTGCATTGAAGATGACGATGATGATTCTATCGACTGTAACCGCATTGAAGATGAAGATGATGATCCTATTAGTTTCGACCGCTTCAAAGATAAAGATGATGATCCATGA

Protein sequence

MEEDDPIEKDDESIDFCIEDDDDDSIDCNRIEDEDDDPISFDRFKDKDDDP*
Homology
[Close]
BLAST of MELO3C021861 vs. NCBI nr
Match: gi|659114284|ref|XP_008456992.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 75.1 bits (183), Expect = 4.0e-11
Identity = 34/54 (62.96%), Postives = 44/54 (81.48%), Query Frame = 1 

Query: 2  EEDDPIE-----KDDESIDFCIEDDDDDSIDCNRIEDEDDDPISFDRFKDKDDD 51
          E+DD I+     +DD+ IDF IED+DDDSIDC+ IED+DDDPI +DRF+D+DDD
Sbjct: 32 EDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDEDDD 85

[Close]
BLAST of MELO3C021861 vs. NCBI nr
Match: gi|659114284|ref|XP_008456992.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 68.6 bits (166), Expect = 3.8e-09
Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 1 

Query: 2  EEDDPIE-----KDDESI------------DFCIEDDDDDSIDCNRIEDEDDDPISFDRF 51
          E+DD I+     +DD+SI            DF IED+DDDSIDC+ IED+DDDPI +DRF
Sbjct: 20 EDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRF 79


HSP 2 Score: 60.8 bits (146), Expect = 7.9e-07
Identity = 34/66 (51.52%), Postives = 40/66 (60.61%), Query Frame = 1 

Query: 3  EDDPIE------KDDESIDFCIEDDDDDSIDCN-----------RIEDEDDDPISFDRFK 52
          +DDPI+      +DD+SIDF IED+DDDSID              IEDEDDD I  D  +
Sbjct: 8  DDDPIDFNRIKDEDDDSIDFYIEDEDDDSIDFYIENEDDDFIDFYIEDEDDDSIDCDHIE 67


HSP 3 Score: 52.4 bits (124), Expect = 2.8e-04
Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 1 

Query: 3   EDDPIEKDDESIDFCIEDDDDDSIDCNRIEDEDDDPISFDRFKDKDDDP 52
           +DDP+  D+      IED+D+D   C  IEDEDDD +S+   +D+DDDP
Sbjct: 107 DDDPLGYDN------IEDEDEDPFSCGCIEDEDDDSLSYSHIEDEDDDP 149


HSP 4 Score: 44.7 bits (104), Expect = 5.9e-02
Identity = 25/68 (36.76%), Postives = 37/68 (54.41%), Query Frame = 1 

Query: 2   EEDDPIE------KDDESIDFC-IEDDDDDSIDCNRI-----------EDEDDDPISFDR 52
           E+DD I+      KDD+ I +   ED+DDD + C  +           ED DDDP+ +D 
Sbjct: 56  EDDDSIDCDHIEDKDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSVIFEDGDDDPLGYDN 115


HSP 5 Score: 41.2 bits (95), Expect = 6.5e-01
Identity = 23/67 (34.33%), Postives = 34/67 (50.75%), Query Frame = 1 

Query: 2   EEDDPI------EKDDES------------IDFCIEDDDDDSIDCNRIEDEDDDPISFDR 51
           ++DDPI      ++DD+             +    ED DDD +  + IEDED+DP S   
Sbjct: 69  KDDDPIGWDRFEDEDDDRLGCVALKMKMMIVSVIFEDGDDDPLGYDNIEDEDEDPFSCGC 128


HSP 6 Score: 61.6 bits (148), Expect = 4.6e-07
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 1 

Query: 9  KDDESIDFC-IEDDDDDSIDCNRIEDEDDDPISFDRFKDKDDD 51
          K D+ I+F  I+D+DDDSI+ NRIEDEDDDPI  DR KDKDDD
Sbjct: 29 KKDDPINFNRIKDEDDDSINFNRIEDEDDDPIGCDRIKDKDDD 71

[Close]
BLAST of MELO3C021861 vs. NCBI nr
Match: gi|659127358|ref|XP_008463661.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 51.2 bits (121), Expect = 6.3e-04
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 1 

Query: 2  EEDDPI------EKDDESIDFC-IEDDDDDSIDCNRIEDEDDDPISFDRFKDKDDD 51
          ++DDPI      ++DD+SI+F  IED+DDD I C+RI+D+DDD +  D   D+D D
Sbjct: 29 KKDDPINFNRIKDEDDDSINFNRIEDEDDDPIGCDRIKDKDDDHLCDDDCLDEDKD 84


HSP 2 Score: 48.5 bits (114), Expect = 4.1e-03
Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 1 

Query: 2   EEDDPIEKD---DESIDF----C--IEDDD-DDSIDCNRIEDED-DDPISFDRFKDKDDD 52
           +EDDP+  D   DE+ D     C  IED+D DD +DC  IEDED DDP+  +  +D+DDD
Sbjct: 126 DEDDPLGYDIIEDENEDHDPFGCGNIEDEDKDDPLDCGYIEDEDEDDPLDCNSIEDEDDD 185


HSP 3 Score: 46.2 bits (108), Expect = 2.0e-02
Identity = 20/46 (43.48%), Postives = 31/46 (67.39%), Query Frame = 1 

Query: 2   EEDDPIEKDDESIDFCIEDDDDDSIDCNRIEDEDDDPISFDRFKDK 48
           ++DDP++       +  ++D+DD +DCN IEDEDDDP+S +  K K
Sbjct: 155 DKDDPLD-----CGYIEDEDEDDPLDCNSIEDEDDDPLSCNTLKMK 195


HSP 4 Score: 39.7 bits (91), Expect = 1.9e+00
Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 1 

Query: 2   EEDDPIEKDDESIDFCIEDDDDDSIDCNRIEDE-DDDPISFDRFKDKDDD 51
           +EDDP+   D  I++   +D+DD   C  IEDE  DD + F R +D+D+D
Sbjct: 84  DEDDPLSCSD--IEY---EDEDDPFGCGNIEDEGKDDTLDFLRIEDEDED 128


HSP 5 Score: 36.2 bits (82), Expect = 2.1e+01
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 1 

Query: 2   EEDDPI-------EKDDESIDFC-IEDDD-DDSIDCNRIED--EDDDPISFDRFKDKD-D 52
           +EDDP        E  D+++DF  IED+D DD +  + IED  ED DP      +D+D D
Sbjct: 98  DEDDPFGCGNIEDEGKDDTLDFLRIEDEDEDDPLGYDIIEDENEDHDPFGCGNIEDEDKD 157


HSP 6 Score: 32.7 bits (73), Expect = 2.3e+02
Identity = 12/22 (54.55%), Postives = 17/22 (77.27%), Query Frame = 1 

Query: 29 NRIEDEDDDPISFDRFKDKDDD 51
          N +  + DDPI+F+R KD+DDD
Sbjct: 24 NEVAHKKDDPINFNRIKDEDDD 45


HSP 7 Score: 32.7 bits (73), Expect = 2.3e+02
Identity = 19/52 (36.54%), Postives = 29/52 (55.77%), Query Frame = 1 

Query: 2   EEDDPIEKDDESIDFCIEDDDDDSI---DCNRIEDEDDDPISFDRFKDKDDD 51
           E+DDPI  D       I+D DDD +   DC   + ++DDP+S    + +D+D
Sbjct: 55  EDDDPIGCDR------IKDKDDDHLCDDDCLDEDKDEDDPLSCSDIEYEDED 100

The following BLAST results are available for this feature:
BLAST of MELO3C021861 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114284|ref|XP_008456992.1|4.0e-1162.96PREDICTED: prostatic spermine-binding protein-like [Cucumis melo][more]
gi|659114284|ref|XP_008456992.1|3.8e-0953.03PREDICTED: prostatic spermine-binding protein-like [Cucumis melo][more]
gi|659127358|ref|XP_008463661.1|6.3e-0448.21PREDICTED: prostatic spermine-binding protein-like [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021861T1MELO3C021861T1mRNA