MELO3C021839 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021839
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Dynactin subunit 1
Location	chr11 : 6719855 .. 6721289 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAGACTTTTAGATCGCTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCTATGCTCTTCATTTGGATTTCCAGTCATCTAAGGTATCCTATTAATTTTGGATATTCTCAAATAAAATTCAGCAGTCTGTGGAATAATACAAGAAACACTATTAGAGAATTCAATAGTGCACACTGGGATCCAAAGGATCCAGAATATTGGGGTTTGGATGCAGTTTTTCAGCCATTTAACGATAGTAGAAGCAATTTGGAGAGCCCCTTGGATGCCCACAAGTCCTTTGACATACCGTTGTGGAAAATTGGCTTTTATCCCACTATTAGGCTTATGGGGGGCATTGCTTATTCTCCTCTTTTGGTACTACGTCAATCATGGTCAAAACAATTTGCGCCAGTTGTATGTAGGCTAGAAGATTGGGAATTCTCGTATGAGTCCAACATAGCAAATAATAAAATTCATGAAGCAGTCAAGGCATGGAAATTTGTAAAGAAGATTAAGAGTTTGCGACATTGTGAGGGTACTACAGAACAATATGATAATTAGAGACATCTAGAAATAGAATTACAATTAATGCTATGTCAGAATCCTTAGTTCCAAACATAGAATTGAAGAAATCTCATGATAAAGAAAAGGAATTAAAGCGATTAAGAGAAACGAATTGTGTTTTGGCAATAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGTTGTTAATACTCTAAGAGATTTAGACAAGGTGAAACGAAAGCGATTAGAGTTGGAGAAGGAAAACAATTCTTTAAACACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCAACTTACATAAAGAGATAAAAGCTAAAACGGTATGCATTACAGATTTGAAACATGAAATAGAAAGATTGAATGGGGTTGCCTTAGAATTCATAATGCATTACATGAACAAACCATGTCATTTCAACAGACCACTATGGGAATTGAGGTTCTGCAACATTTGATTAAAGAATACAAATCCCAACTTATTGAAGTGGAAAGCAAAAACAGATTTTTGTAAAAAGCCATTAACAATTCTGAAAGCCAGTTGCTGATATGTCGCAAAGCAAGGGAAGTCGTAACAGATGACTATGCTCAATTAATAGAAAAATATCAAGAAATGTCAATAGATTTCATGATGTGGAAGGACGAGTACGAGACATTGAGACGAAAGTATGATTATGCTATAGGTCGGATGGAACGAGGGGCGGAAAAATTAAGACAAATGGCAAGGGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACCTACCCGCGACACCAATAGAGAATTGTCTAATTTTCTAGGAATCATAGGGCAGTACCTCGGATGTTTTGGGTGCTACCATTAG

mRNA sequence

ATGGCGGAGACTTTTAGATCGCTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCTATGCTCTTCATTTGGATTTCCAGTCATCTAAGGTATCCTATTAATTTTGGATATTCTCAAATAAAATTCAGCAGTCTGTGGAATAATACAAGAAACACTATTAGAGAATTCAATAGTGCACACTGGGATCCAAAGGATCCAGAATATTGGGGTTTGGATGCAGTTTTTCAGCCATTTAACGATAGTAGAAGCAATTTGGAGAGCCCCTTGGATGCCCACAAGTCCTTTGACATACCGTTGTGGAAAATTGGCTTTTATCCCACTATTAGGCTTATGGGGGGCATTGCTTATTCTCCTCTTTTGGTACTACGTCAATCATGGTCAAAACAATTTGCGCCAGTTGTATGTAGGCTAGAAGATTGGGAATTCTCGTATGAGTCCAACATAGCAAATAATAAAATTCATGAAGCAGTCAAGGCATGGAAATTTGTAAAGAAGATTAAGAGTTTGCGACATTGTGAGGAATCCTTAGTTCCAAACATAGAATTGAAGAAATCTCATGATAAAGAAAAGGAATTAAAGCGATTAAGAGAAACGAATTGTGTTTTGGCAATAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGTTGTTAATACTCTAAGAGATTTAGACAAGGTGAAACGAAAGCGATTAGAGTTGGAGAAGGAAAACAATTCTTTAAACACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCAACTTACATAAAGAGATAAAAGCTAAAACGGACGAGTACGAGACATTGAGACGAAAGTATGATTATGCTATAGGTCGGATGGAACGAGGGGCGGAAAAATTAAGACAAATGGCAAGGGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACCTACCCGCGACACCAATAGAGAATTGTCTAATTTTCTAGGAATCATAGGGCAGTACCTCGGATGTTTTGGGTGCTACCATTAG

Coding sequence (CDS)

ATGGCGGAGACTTTTAGATCGCTAAATCATTGTCGAATCCAAGGTAAAGGAAAATTCTTCAGCTGTGCTCCTATGCTCTTCATTTGGATTTCCAGTCATCTAAGGTATCCTATTAATTTTGGATATTCTCAAATAAAATTCAGCAGTCTGTGGAATAATACAAGAAACACTATTAGAGAATTCAATAGTGCACACTGGGATCCAAAGGATCCAGAATATTGGGGTTTGGATGCAGTTTTTCAGCCATTTAACGATAGTAGAAGCAATTTGGAGAGCCCCTTGGATGCCCACAAGTCCTTTGACATACCGTTGTGGAAAATTGGCTTTTATCCCACTATTAGGCTTATGGGGGGCATTGCTTATTCTCCTCTTTTGGTACTACGTCAATCATGGTCAAAACAATTTGCGCCAGTTGTATGTAGGCTAGAAGATTGGGAATTCTCGTATGAGTCCAACATAGCAAATAATAAAATTCATGAAGCAGTCAAGGCATGGAAATTTGTAAAGAAGATTAAGAGTTTGCGACATTGTGAGGAATCCTTAGTTCCAAACATAGAATTGAAGAAATCTCATGATAAAGAAAAGGAATTAAAGCGATTAAGAGAAACGAATTGTGTTTTGGCAATAGAGAACGAAAAGTTAAGAGAAGAAGTCAAGAAATGGGTCCAGCAAGTTGTTAATACTCTAAGAGATTTAGACAAGGTGAAACGAAAGCGATTAGAGTTGGAGAAGGAAAACAATTCTTTAAACACTGAGGCAATCCAAGTGAGAAAAAAGAATAAGAGGTTATTAAGGAATATTGCCAACTTACATAAAGAGATAAAAGCTAAAACGGACGAGTACGAGACATTGAGACGAAAGTATGATTATGCTATAGGTCGGATGGAACGAGGGGCGGAAAAATTAAGACAAATGGCAAGGGTGGCAGATCAATTCTCAGTGCAAGCTAGGACTCTCCGGCAAGGTGTTATACCTACCCGCGACACCAATAGAGAATTGTCTAATTTTCTAGGAATCATAGGGCAGTACCTCGGATGTTTTGGGTGCTACCATTAG

Protein sequence

MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIREFNSAHWDPKDPEYWGLDAVFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLMGGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRHCEESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYDYAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTNRELSNFLGIIGQYLGCFGCYH*

Homology

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BLAST of MELO3C021839 vs. Swiss-Prot
Match: HOME2_MOUSE (Homer protein homolog 2 OS=Mus musculus GN=Homer2 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.3e-06
Identity = 41/154 (26.62%), Postives = 74/154 (48.05%), Query Frame = 1


Query: 194 EKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEA 253
           E EL+ LRE+N  L    ++    V++W +Q      + D+++ K  ELE++ + +N E 
Sbjct: 184 EMELQTLRESNARLTTALQESAASVEQWKRQFSICRDENDRLRSKIEELEEQCSEINRE- 243

Query: 254 IQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYD---YAIGRMERGAEKLRQMARVAD 313
              ++KN +L R I  L  E++ K  E + LR++ +     +   E  +EKL    R   
Sbjct: 244 ---KEKNTQLKRRIEELESEVRDKEMELKDLRKQSEIIPQLMSECEYVSEKLEAAERDNQ 303

Query: 314 QFSVQARTLRQGVIPTRDTNR----ELSNFLGII 341
               + R+L+  +  ++   R    EL +FL ++
Sbjct: 304 NLEDKVRSLKTDIEESKYRQRHLKGELKSFLEVL 333

[Close]

BLAST of MELO3C021839 vs. Swiss-Prot
Match: HOME2_HUMAN (Homer protein homolog 2 OS=Homo sapiens GN=HOMER2 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.0e-06
Identity = 41/154 (26.62%), Postives = 74/154 (48.05%), Query Frame = 1


Query: 194 EKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEA 253
           E EL+ LRE+N  L    ++    V++W +Q      + D+++ K  ELE++ + +N E 
Sbjct: 184 EIELQTLRESNARLTTALQESAASVEQWKRQFSICRDENDRLRNKIDELEEQCSEINRE- 243

Query: 254 IQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYD---YAIGRMERGAEKLRQMARVAD 313
              ++KN +L R I  L  E++ K  E + LR++ +     +   E  +EKL    R   
Sbjct: 244 ---KEKNTQLKRRIEELEAELREKETELKDLRKQSEIIPQLMSECEYVSEKLEAAERDNQ 303

Query: 314 QFSVQARTLRQGVIPTRDTNR----ELSNFLGII 341
               + R+L+  +  ++   R    EL +FL ++
Sbjct: 304 NLEDKVRSLKTDIEESKYRQRHLKVELKSFLEVL 333

[Close]

BLAST of MELO3C021839 vs. Swiss-Prot
Match: HOME2_RAT (Homer protein homolog 2 OS=Rattus norvegicus GN=Homer2 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.1e-06
Identity = 41/154 (26.62%), Postives = 73/154 (47.40%), Query Frame = 1


Query: 194 EKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRKRLELEKENNSLNTEA 253
           E EL+ LRE+N  L    ++    V++W +Q      + D+++ K  ELE++   +N E 
Sbjct: 184 EIELQTLRESNARLTTALQESAASVEQWKRQFSICRDENDRLRSKIEELEEQCGEINRE- 243

Query: 254 IQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYD---YAIGRMERGAEKLRQMARVAD 313
              ++KN +L R I  L  E++ K  E + LR++ +     +   E  +EKL    R   
Sbjct: 244 ---KEKNTQLKRRIEELESEVREKEMELKDLRKQSEIIPQLMSECEYVSEKLEAAERDNQ 303

Query: 314 QFSVQARTLRQGVIPTRDTNR----ELSNFLGII 341
               + R+L+  +  ++   R    EL +FL ++
Sbjct: 304 NLEDKVRSLKTDIEESKYRQRHLKGELKSFLEVL 333

[Close]

BLAST of MELO3C021839 vs. TrEMBL
Match: A0A061EXR3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.8e-19
Identity = 83/301 (27.57%), Postives = 145/301 (48.17%), Query Frame = 1


Query: 1   MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIRE 60
           +AET RSLN+CR +G+G+F  CA +L IWI SH    ++      KF   ++     IRE
Sbjct: 204 LAETLRSLNYCRRKGEGRFVGCAQLLSIWIVSHFECKVD------KFRKPFHPQTAPIRE 263

Query: 61  FNSAHW-DPKDPEYWGLDAVFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLMG-- 120
           F  + W + +  E W   +  +          +P   H      L+K G  P ++LMG  
Sbjct: 264 FCESEWPENRTKEQW--ISRLRELMSVEVTWRAPWMPHHPV---LYKCGNEPWVQLMGPW 323

Query: 121 -GIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRH 180
             I+Y+P++V RQ  S+QF P+  RL   EF+YE      +I E  +AWK   ++   R+
Sbjct: 324 GAISYAPIMVRRQFGSEQFVPMTHRLNTLEFAYEEPGFLKRIEEIAQAWKKTSRVDQGRY 383

Query: 181 CEESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVK 240
            +E     I  +  HD     +R+++   V+  + + LR  V     +  + L + +  +
Sbjct: 384 TDE---VTIGYQIWHD-----QRVKD---VVYPKEDVLRGPVD---PEPRDALLESELAR 443

Query: 241 RKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYDYAIGRME 298
           +K    E EN S       ++K+ +++ R ++   K+++    +YE+L  K+      ++
Sbjct: 444 KKS---EAENASWKQRYEDLQKECEKMKREVSEQRKKVRKMEGKYESLNDKFSTTTSELQ 476

[Close]

BLAST of MELO3C021839 vs. TrEMBL
Match: A0A061F212_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_025984 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.1e-18
Identity = 82/301 (27.24%), Postives = 143/301 (47.51%), Query Frame = 1


Query: 1   MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIRE 60
           +AET RSLN+CR +G+G+F  CA +L IWI SH    ++      KF   ++     IRE
Sbjct: 230 LAETLRSLNYCRRKGEGRFVGCAQLLSIWIVSHFECKVD------KFRKPFHPQTAPIRE 289

Query: 61  FNSAHW-DPKDPEYWGLDAVFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLM--- 120
           F  + W + +  E W   + F+          +P   H      L+K G  P + LM   
Sbjct: 290 FCESEWPENRTKEQW--ISRFRELMSVEVTWRAPWMPHHPI---LYKCGNEPWVTLMGPW 349

Query: 121 GGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRH 180
           G I+Y+P++V RQ  S+QF P+  RL   EF+Y  +    +I E  +AWK   ++   R+
Sbjct: 350 GAISYAPIMVRRQFGSEQFVPMTHRLNTLEFAYGESGFLKRIEEIAQAWKKTSRVDQGRY 409

Query: 181 CEESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVK 240
            +E        +  HD     +R+++   V+  + + LR  V     +  + L + +  +
Sbjct: 410 TDE---VTTGYQIWHD-----QRVKD---VVYPKEDALRGPVD---PEPRDALLESELAR 469

Query: 241 RKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYDYAIGRME 298
           +K    E EN S       ++K+ +++ R ++   K+++    +YE L  K+      ++
Sbjct: 470 KKS---EAENASWKQRYEDLQKECEKMKREVSEQRKKVRKMEGKYENLNDKFSATTSELQ 502

[Close]

BLAST of MELO3C021839 vs. TrEMBL
Match: A0A061E378_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_008095 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 5.5e-18
Identity = 82/301 (27.24%), Postives = 143/301 (47.51%), Query Frame = 1


Query: 1   MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIRE 60
           +A+T RSLN+CR +G+G+F  CA +L IWI SH    ++      KF   ++     IRE
Sbjct: 230 LAKTLRSLNYCRRKGEGRFVGCAQLLSIWIVSHFECKVD------KFRKPFHPQTAPIRE 289

Query: 61  FNSAHW-DPKDPEYWGLDAVFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLMGG- 120
           F  + W + +  E W   + F+          +P   H      L+K G  P + LMG  
Sbjct: 290 FCESEWPENRTKEQW--ISRFRELMSVEVTWRAPWMPHHPV---LYKCGNEPWVPLMGPW 349

Query: 121 --IAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRH 180
             I+Y+P++V RQ  S+QF P+  RL   EF+Y       KI E  +AWK   ++   R+
Sbjct: 350 GVISYAPIMVRRQFGSEQFVPMTHRLNTLEFAYGEPSFLKKIEEIAQAWKKTSRVDQGRY 409

Query: 181 CEESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVK 240
            +E        +  HD     +R+++   V+  + + LR  V     +  + L + +  +
Sbjct: 410 TDE---VTTGYQIWHD-----QRVKD---VVYPKEDALRGPVD---PEPRDALLESELAR 469

Query: 241 RKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYDYAIGRME 298
           +K    E EN S       ++K+ +++ R ++   K+++    +YE+L  K+      ++
Sbjct: 470 KKS---EAENASWKQRYEDLQKECEKMKREVSEQRKKVQKMEGKYESLNDKFSATTSELQ 502

[Close]

BLAST of MELO3C021839 vs. TrEMBL
Match: A0A061E8N3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_010930 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.0e-16
Identity = 92/370 (24.86%), Postives = 158/370 (42.70%), Query Frame = 1


Query: 1   MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIRE 60
           +AETFRSLN CR +G+G+F  CA +L IWI SH      F   + KF  L+ +    I E
Sbjct: 49  LAETFRSLNFCRRKGEGRFIGCAQLLTIWIKSH------FECKESKFRKLYLSVSCPILE 108

Query: 61  FNSAHW-DPKDPEYWGLDAVFQPFNDSRSNLESPLDAHKSFDIP-------LWKIGFYPT 120
           F  + W D K  E W             + L   +    ++  P       ++K G  P 
Sbjct: 109 FCESEWPDYKRKEEW------------VARLRRLMSIEVTWRAPWMPRMQVMYKCGDKPW 168

Query: 121 IRLM---GGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVK 180
           + LM   G I+Y+P++V RQ  S+QF P+  +L+  EF+Y       +I E  + WK   
Sbjct: 169 VPLMGPWGAISYAPIMVRRQFGSEQFVPMTHQLDQLEFTYGEPETLKRIEEIAQDWKKTC 228

Query: 181 KIKSLRHCEE----------SLVPN-IELKKSHDKEKELKRLRETNCVLAIENEKLREEV 240
           ++   R  +E            V N I   K+  K       ++      +  ++L +E+
Sbjct: 229 RVDQGRVTDEVTTGYHTWHDQRVKNVIHPPKNPSKHPVNPEPQDVLLESELTRKRLEKEM 288

Query: 241 KKWVQQVVNTLRDLDKVKRKRLELE-KENNSLNTEAIQVRKKNKRLLRNIANLHK----- 300
               ++  + L ++ K   +++ +  KE +   ++  +V   N  LL  I  L       
Sbjct: 289 MNMKRRHEDELEEVKKETARKVRVALKERDEWQSKFEEVSVANSSLLARIQELQSANNAL 348

Query: 301 --EIKAKTDEYETLRRKYDYAIGRMERGAEKLRQMARVADQFSVQARTLRQGVIPTRDTN 341
             E++ +    + L+   D     ME    + R MA   ++       LR+ ++P  + +
Sbjct: 349 QHEVRRQGQTIQELKNDCDMLETAMEGHKAQARVMADKTEE-------LRREILPKDELS 393

[Close]

BLAST of MELO3C021839 vs. TrEMBL
Match: A0A061DPM2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_003960 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 1.0e-16
Identity = 80/301 (26.58%), Postives = 142/301 (47.18%), Query Frame = 1


Query: 1   MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIRE 60
           +A+T RSLN+CR +G+G+F  CA +L IWI SH    I+      KF   ++     IRE
Sbjct: 230 LAKTLRSLNYCRRKGEGRFVGCAQLLSIWIVSHFECKID------KFRKPFHLQTAPIRE 289

Query: 61  FNSAHW-DPKDPEYWGLDAVFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLMG-- 120
           F  + W + +  E W   + F+          +P   H      L+K    P + LMG  
Sbjct: 290 FCESEWPENRTKEQW--ISRFRKLMSVEVTWRAPWMPHHPV---LYKCENEPWVPLMGPW 349

Query: 121 -GIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRH 180
             I+Y+P++V RQ  S+QF P+  RL   EF+Y       +I E  +AWK   ++   R+
Sbjct: 350 GAISYAPIMVRRQFGSEQFVPMTHRLNTLEFAYGEPGFLKRIEEIAQAWKKTSRVDQGRY 409

Query: 181 CEESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVK 240
            +E        +  HD     +R+++   V+  + + +R  V     +  + L + +  +
Sbjct: 410 TDE---VTTGYQMWHD-----QRVKD---VVYPKEDAIRGPVD---PEPRDALLESELAR 469

Query: 241 RKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYDYAIGRME 298
           +K    E EN S       ++K+ +++ R ++   K+++    +YE+L  K+      ++
Sbjct: 470 KKS---EAENASWKQRYEDLQKECEKMKREVSQQRKKVQKMEGKYESLNDKFSATTSELQ 502

[Close]

BLAST of MELO3C021839 vs. NCBI nr
Match: gi|659128749|ref|XP_008464352.1| (PREDICTED: putative golgin subfamily A member 6-like protein 3, partial [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 7.4e-40
Identity = 88/109 (80.73%), Postives = 96/109 (88.07%), Query Frame = 1


Query: 179 ESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVKRK 238
           ESLVPNIELKK HD+EKELKRLRE NCVLA ENEKLREEVKKWVQQ VNT RDLD+ KRK
Sbjct: 3   ESLVPNIELKKYHDQEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTQRDLDEAKRK 62

Query: 239 RLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRK 288
           RLELEKEN+SLNTEAIQVRKKNKRLLRNIANLH+EI+A+ +    L  +
Sbjct: 63  RLELEKENDSLNTEAIQVRKKNKRLLRNIANLHEEIEAEKEFQNALHEQ 111

[Close]

BLAST of MELO3C021839 vs. NCBI nr
Match: gi|659128749|ref|XP_008464352.1| (PREDICTED: putative golgin subfamily A member 6-like protein 3, partial [Cucumis melo])

HSP 1 Score: 85.9 bits (211), Expect = 1.6e-13
Identity = 61/160 (38.12%), Postives = 86/160 (53.75%), Query Frame = 1


Query: 169 KKIKSLRHCEESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNT 228
           KK K L     +L   IE +K        + +      + IE   L+  ++++  Q++  
Sbjct: 82  KKNKRLLRNIANLHEEIEAEKEFQNALHEQAISSQQTAMGIE--VLQHSIEEYKSQLI-- 141

Query: 229 LRDLDKVKRKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKT-------DEY 288
                + + K   L+K  NS  ++ +  RK  + +  + A L ++ +  +       DEY
Sbjct: 142 -----EAESKNNFLQKAVNSSESQLLICRKAREVITDDYAQLMEKYQEMSIDFMMWKDEY 201

Query: 289 ETLRRKYDYAIGRMERGAEKLRQMARVADQFSVQARTLRQ 322
           ETLRRKYD AI RMERGAEKLRQMA VADQFSVQARTLRQ
Sbjct: 202 ETLRRKYDDAIRRMERGAEKLRQMASVADQFSVQARTLRQ 232

HSP 2 Score: 104.0 bits (258), Expect = 5.5e-19
Identity = 83/301 (27.57%), Postives = 145/301 (48.17%), Query Frame = 1


Query: 1   MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIRE 60
           +AET RSLN+CR +G+G+F  CA +L IWI SH    ++      KF   ++     IRE
Sbjct: 204 LAETLRSLNYCRRKGEGRFVGCAQLLSIWIVSHFECKVD------KFRKPFHPQTAPIRE 263

Query: 61  FNSAHW-DPKDPEYWGLDAVFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLMG-- 120
           F  + W + +  E W   +  +          +P   H      L+K G  P ++LMG  
Sbjct: 264 FCESEWPENRTKEQW--ISRLRELMSVEVTWRAPWMPHHPV---LYKCGNEPWVQLMGPW 323

Query: 121 -GIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRH 180
             I+Y+P++V RQ  S+QF P+  RL   EF+YE      +I E  +AWK   ++   R+
Sbjct: 324 GAISYAPIMVRRQFGSEQFVPMTHRLNTLEFAYEEPGFLKRIEEIAQAWKKTSRVDQGRY 383

Query: 181 CEESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVK 240
            +E     I  +  HD     +R+++   V+  + + LR  V     +  + L + +  +
Sbjct: 384 TDE---VTIGYQIWHD-----QRVKD---VVYPKEDVLRGPVD---PEPRDALLESELAR 443

Query: 241 RKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYDYAIGRME 298
           +K    E EN S       ++K+ +++ R ++   K+++    +YE+L  K+      ++
Sbjct: 444 KKS---EAENASWKQRYEDLQKECEKMKREVSEQRKKVRKMEGKYESLNDKFSTTTSELQ 476

[Close]

BLAST of MELO3C021839 vs. NCBI nr
Match: gi|590641252|ref|XP_007030180.1| (Uncharacterized protein TCM_025984 [Theobroma cacao])

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18
Identity = 82/301 (27.24%), Postives = 143/301 (47.51%), Query Frame = 1


Query: 1   MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIRE 60
           +AET RSLN+CR +G+G+F  CA +L IWI SH    ++      KF   ++     IRE
Sbjct: 230 LAETLRSLNYCRRKGEGRFVGCAQLLSIWIVSHFECKVD------KFRKPFHPQTAPIRE 289

Query: 61  FNSAHW-DPKDPEYWGLDAVFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLM--- 120
           F  + W + +  E W   + F+          +P   H      L+K G  P + LM   
Sbjct: 290 FCESEWPENRTKEQW--ISRFRELMSVEVTWRAPWMPHHPI---LYKCGNEPWVTLMGPW 349

Query: 121 GGIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRH 180
           G I+Y+P++V RQ  S+QF P+  RL   EF+Y  +    +I E  +AWK   ++   R+
Sbjct: 350 GAISYAPIMVRRQFGSEQFVPMTHRLNTLEFAYGESGFLKRIEEIAQAWKKTSRVDQGRY 409

Query: 181 CEESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVK 240
            +E        +  HD     +R+++   V+  + + LR  V     +  + L + +  +
Sbjct: 410 TDE---VTTGYQIWHD-----QRVKD---VVYPKEDALRGPVD---PEPRDALLESELAR 469

Query: 241 RKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYDYAIGRME 298
           +K    E EN S       ++K+ +++ R ++   K+++    +YE L  K+      ++
Sbjct: 470 KKS---EAENASWKQRYEDLQKECEKMKREVSEQRKKVRKMEGKYENLNDKFSATTSELQ 502

[Close]

BLAST of MELO3C021839 vs. NCBI nr
Match: gi|590690716|ref|XP_007043584.1| (Uncharacterized protein TCM_008095 [Theobroma cacao])

HSP 1 Score: 100.1 bits (248), Expect = 7.9e-18
Identity = 82/301 (27.24%), Postives = 143/301 (47.51%), Query Frame = 1


Query: 1   MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIRE 60
           +A+T RSLN+CR +G+G+F  CA +L IWI SH    ++      KF   ++     IRE
Sbjct: 230 LAKTLRSLNYCRRKGEGRFVGCAQLLSIWIVSHFECKVD------KFRKPFHPQTAPIRE 289

Query: 61  FNSAHW-DPKDPEYWGLDAVFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLMGG- 120
           F  + W + +  E W   + F+          +P   H      L+K G  P + LMG  
Sbjct: 290 FCESEWPENRTKEQW--ISRFRELMSVEVTWRAPWMPHHPV---LYKCGNEPWVPLMGPW 349

Query: 121 --IAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRH 180
             I+Y+P++V RQ  S+QF P+  RL   EF+Y       KI E  +AWK   ++   R+
Sbjct: 350 GVISYAPIMVRRQFGSEQFVPMTHRLNTLEFAYGEPSFLKKIEEIAQAWKKTSRVDQGRY 409

Query: 181 CEESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVK 240
            +E        +  HD     +R+++   V+  + + LR  V     +  + L + +  +
Sbjct: 410 TDE---VTTGYQIWHD-----QRVKD---VVYPKEDALRGPVD---PEPRDALLESELAR 469

Query: 241 RKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYDYAIGRME 298
           +K    E EN S       ++K+ +++ R ++   K+++    +YE+L  K+      ++
Sbjct: 470 KKS---EAENASWKQRYEDLQKECEKMKREVSEQRKKVQKMEGKYESLNDKFSATTSELQ 502

[Close]

BLAST of MELO3C021839 vs. NCBI nr
Match: gi|590715508|ref|XP_007050215.1| (Uncharacterized protein TCM_003960 [Theobroma cacao])

HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16
Identity = 80/301 (26.58%), Postives = 142/301 (47.18%), Query Frame = 1


Query: 1   MAETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPINFGYSQIKFSSLWNNTRNTIRE 60
           +A+T RSLN+CR +G+G+F  CA +L IWI SH    I+      KF   ++     IRE
Sbjct: 230 LAKTLRSLNYCRRKGEGRFVGCAQLLSIWIVSHFECKID------KFRKPFHLQTAPIRE 289

Query: 61  FNSAHW-DPKDPEYWGLDAVFQPFNDSRSNLESPLDAHKSFDIPLWKIGFYPTIRLMG-- 120
           F  + W + +  E W   + F+          +P   H      L+K    P + LMG  
Sbjct: 290 FCESEWPENRTKEQW--ISRFRKLMSVEVTWRAPWMPHHPV---LYKCENEPWVPLMGPW 349

Query: 121 -GIAYSPLLVLRQSWSKQFAPVVCRLEDWEFSYESNIANNKIHEAVKAWKFVKKIKSLRH 180
             I+Y+P++V RQ  S+QF P+  RL   EF+Y       +I E  +AWK   ++   R+
Sbjct: 350 GAISYAPIMVRRQFGSEQFVPMTHRLNTLEFAYGEPGFLKRIEEIAQAWKKTSRVDQGRY 409

Query: 181 CEESLVPNIELKKSHDKEKELKRLRETNCVLAIENEKLREEVKKWVQQVVNTLRDLDKVK 240
            +E        +  HD     +R+++   V+  + + +R  V     +  + L + +  +
Sbjct: 410 TDE---VTTGYQMWHD-----QRVKD---VVYPKEDAIRGPVD---PEPRDALLESELAR 469

Query: 241 RKRLELEKENNSLNTEAIQVRKKNKRLLRNIANLHKEIKAKTDEYETLRRKYDYAIGRME 298
           +K    E EN S       ++K+ +++ R ++   K+++    +YE+L  K+      ++
Sbjct: 470 KKS---EAENASWKQRYEDLQKECEKMKREVSQQRKKVQKMEGKYESLNDKFSATTSELQ 502

The following BLAST results are available for this feature:

BLAST of MELO3C021839 vs. Swiss-Prot


Match Name	E-value	Identity	Description
HOME2_MOUSE	5.3e-06	26.62	Homer protein homolog 2 OS=Mus musculus GN=Homer2 PE=1 SV=1	[more]
HOME2_HUMAN	7.0e-06	26.62	Homer protein homolog 2 OS=Homo sapiens GN=HOMER2 PE=1 SV=1	[more]
HOME2_RAT	9.1e-06	26.62	Homer protein homolog 2 OS=Rattus norvegicus GN=Homer2 PE=1 SV=1	[more]

BLAST of MELO3C021839 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061EXR3_THECC	3.8e-19	27.57	Uncharacterized protein OS=Theobroma cacao GN=TCM_024883 PE=4 SV=1	[more]
A0A061F212_THECC	1.1e-18	27.24	Uncharacterized protein OS=Theobroma cacao GN=TCM_025984 PE=4 SV=1	[more]
A0A061E378_THECC	5.5e-18	27.24	Uncharacterized protein OS=Theobroma cacao GN=TCM_008095 PE=4 SV=1	[more]
A0A061E8N3_THECC	1.0e-16	24.86	Uncharacterized protein OS=Theobroma cacao GN=TCM_010930 PE=4 SV=1	[more]
A0A061DPM2_THECC	1.0e-16	26.58	Uncharacterized protein OS=Theobroma cacao GN=TCM_003960 PE=4 SV=1	[more]

BLAST of MELO3C021839 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659128749\|ref\|XP_008464352.1\|	7.4e-40	80.73	PREDICTED: putative golgin subfamily A member 6-like protein 3, partial [Cucumis...	[more]
gi\|659128749\|ref\|XP_008464352.1\|	1.6e-13	38.13	PREDICTED: putative golgin subfamily A member 6-like protein 3, partial [Cucumis...	[more]
gi\|590641252\|ref\|XP_007030180.1\|	1.6e-18	27.24	Uncharacterized protein TCM_025984 [Theobroma cacao]	[more]
gi\|590690716\|ref\|XP_007043584.1\|	7.9e-18	27.24	Uncharacterized protein TCM_008095 [Theobroma cacao]	[more]
gi\|590715508\|ref\|XP_007050215.1\|	1.5e-16	26.58	Uncharacterized protein TCM_003960 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021839T1	MELO3C021839T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 211..287 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021839	Cucumber (Gy14) v2	cgybmeB083
MELO3C021839	Silver-seed gourd	carmeB0429
MELO3C021839	Silver-seed gourd	carmeB1022
MELO3C021839	Cucumber (Chinese Long) v3	cucmeB103
MELO3C021839	Watermelon (97103) v2	mewmbB130
MELO3C021839	Wax gourd	mewgoB126
MELO3C021839	Cucumber (Gy14) v1	cgymeB524
MELO3C021839	Cucurbita maxima (Rimu)	cmameB493
MELO3C021839	Cucurbita maxima (Rimu)	cmameB534
MELO3C021839	Cucurbita moschata (Rifu)	cmomeB483
MELO3C021839	Cucurbita moschata (Rifu)	cmomeB524
MELO3C021839	Wild cucumber (PI 183967)	cpimeB096
MELO3C021839	Cucumber (Chinese Long) v2	cumeB086
MELO3C021839	Watermelon (Charleston Gray)	mewcgB076
MELO3C021839	Watermelon (97103) v1	mewmB087
MELO3C021839	Cucurbita pepo (Zucchini)	cpemeB672
MELO3C021839	Bottle gourd (USVL1VR-Ls)	lsimeB053