MELO3C021761 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021761
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPeptide transporter
Locationchr12 : 16856498 .. 16856689 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACAAGTGGAGGAGAAAGGCTCGAAAAATGGAAGAGATGATTATACGGAAGATGCAACTGTGAGTTTCAAAGGATTACCTGTCTTAAGATCAAAGACTGGGAGATGGAGAGCCTGTTCCTTCATTGTTGGTGATTATAAGTTTAGAGACTTGAAAACTGTAAAGAAAACCGTAGAAAATTGTAAGTAA

mRNA sequence

ATGGCACAAGTGGAGGAGAAAGGCTCGAAAAATGGAAGAGATGATTATACGGAAGATGCAACTGTGAGTTTCAAAGGATTACCTGTCTTAAGATCAAAGACTGGGAGATGGAGAGCCTGTTCCTTCATTGTTGGTGATTATAAGTTTAGAGACTTGAAAACTGTAAAGAAAACCGTAGAAAATTGTAAGTAA

Coding sequence (CDS)

ATGGCACAAGTGGAGGAGAAAGGCTCGAAAAATGGAAGAGATGATTATACGGAAGATGCAACTGTGAGTTTCAAAGGATTACCTGTCTTAAGATCAAAGACTGGGAGATGGAGAGCCTGTTCCTTCATTGTTGGTGATTATAAGTTTAGAGACTTGAAAACTGTAAAGAAAACCGTAGAAAATTGTAAGTAA

Protein sequence

MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDYKFRDLKTVKKTVENCK*
Homology
[Close]
BLAST of MELO3C021761 vs. Swiss-Prot
Match: PTR30_ARATH (Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana GN=NPF5.1 PE=2 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 4.8e-06
Identity = 21/30 (70.00%), Postives = 23/30 (76.67%), Query Frame = 1 

Query: 16 YTEDATVSFKGLPVLRSKTGRWRACSFIVG 46
          YT+D TV  +G PVL SKTGRWRACSF++G
Sbjct: 7  YTQDGTVDLQGRPVLASKTGRWRACSFLLG 36

[Close]
BLAST of MELO3C021761 vs. TrEMBL
Match: A0A0A0LC54_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G608170 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 3.4e-14
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 1 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          MAQV EKGS+NGRDDYTED TVS KGLPVLRSKTGRWRACSFIV
Sbjct: 1  MAQVGEKGSENGRDDYTEDGTVSLKGLPVLRSKTGRWRACSFIV 44

[Close]
BLAST of MELO3C021761 vs. TrEMBL
Match: A0A061DPK9_THECC (Peptide transporter PTR3-A OS=Theobroma cacao GN=TCM_003950 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 7.0e-12
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 1 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVG 46
          MA+VEEKGS +GRDDYTED +V  KG PVLRS+TGRW+ACSFIVG
Sbjct: 54 MAKVEEKGSVDGRDDYTEDGSVDLKGRPVLRSETGRWKACSFIVG 98

[Close]
BLAST of MELO3C021761 vs. TrEMBL
Match: B9SKP9_RICCO (Oligopeptide transporter, putative OS=Ricinus communis GN=RCOM_0543240 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-11
Identity = 35/45 (77.78%), Postives = 37/45 (82.22%), Query Frame = 1 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVG 46
          M +VEEKG  NGRDDYTED TV  KG P+LRSKTGRWRAC FIVG
Sbjct: 1  MDKVEEKGPANGRDDYTEDGTVDLKGRPILRSKTGRWRACWFIVG 45

[Close]
BLAST of MELO3C021761 vs. TrEMBL
Match: M5VUR8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026888mg PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.2e-11
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 1 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVG 46
          MA VEEKGS +GR+D+T+D TV  KG P+LRSKTGRWRACSFIVG
Sbjct: 1  MASVEEKGSADGREDHTQDGTVDLKGRPILRSKTGRWRACSFIVG 45

[Close]
BLAST of MELO3C021761 vs. TrEMBL
Match: A0A067K3U8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17647 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.6e-11
Identity = 33/45 (73.33%), Postives = 37/45 (82.22%), Query Frame = 1 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVG 46
          M  +EEKGS NG++DYTED TV   G P+LRSKTGRWRACSFIVG
Sbjct: 1  MENIEEKGSANGKEDYTEDGTVDLNGRPILRSKTGRWRACSFIVG 45

[Close]
BLAST of MELO3C021761 vs. TAIR10
Match: AT2G40460.1 (AT2G40460.1 Major facilitator superfamily protein)

HSP 1 Score: 51.2 bits (121), Expect = 2.7e-07
Identity = 21/30 (70.00%), Postives = 23/30 (76.67%), Query Frame = 1 

Query: 16 YTEDATVSFKGLPVLRSKTGRWRACSFIVG 46
          YT+D TV  +G PVL SKTGRWRACSF++G
Sbjct: 7  YTQDGTVDLQGRPVLASKTGRWRACSFLLG 36

[Close]
BLAST of MELO3C021761 vs. TAIR10
Match: AT5G46040.1 (AT5G46040.1 Major facilitator superfamily protein)

HSP 1 Score: 49.3 bits (116), Expect = 1.0e-06
Identity = 24/41 (58.54%), Postives = 27/41 (65.85%), Query Frame = 1 

Query: 4  VEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          VEE G     DDYT+D TV  +G  V RS+TGRW+ACSF+V
Sbjct: 3  VEEVG-----DDYTKDGTVDLRGNRVRRSQTGRWKACSFVV 38

[Close]
BLAST of MELO3C021761 vs. TAIR10
Match: AT5G46050.1 (AT5G46050.1 peptide transporter 3)

HSP 1 Score: 48.5 bits (114), Expect = 1.8e-06
Identity = 24/41 (58.54%), Postives = 26/41 (63.41%), Query Frame = 1 

Query: 4  VEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          VEE G     DDYT+D TV  +G PV RS  GRW+ACSF+V
Sbjct: 3  VEEVG-----DDYTKDGTVDLQGNPVRRSIRGRWKACSFVV 38

[Close]
BLAST of MELO3C021761 vs. NCBI nr
Match: gi|659093138|ref|XP_008447390.1| (PREDICTED: LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo])

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-14
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 1 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          MAQVEEKGS+NGRDDYTED TVS KGLPVLRSKTG WRACSFIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]
BLAST of MELO3C021761 vs. NCBI nr
Match: gi|449468700|ref|XP_004152059.1| (PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis sativus])

HSP 1 Score: 85.1 bits (209), Expect = 4.8e-14
Identity = 40/44 (90.91%), Postives = 41/44 (93.18%), Query Frame = 1 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIV 45
          MAQV EKGS+NGRDDYTED TVS KGLPVLRSKTGRWRACSFIV
Sbjct: 1  MAQVGEKGSENGRDDYTEDGTVSLKGLPVLRSKTGRWRACSFIV 44

[Close]
BLAST of MELO3C021761 vs. NCBI nr
Match: gi|590715454|ref|XP_007050200.1| (Peptide transporter PTR3-A [Theobroma cacao])

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-11
Identity = 35/45 (77.78%), Postives = 40/45 (88.89%), Query Frame = 1 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVG 46
          MA+VEEKGS +GRDDYTED +V  KG PVLRS+TGRW+ACSFIVG
Sbjct: 54 MAKVEEKGSVDGRDDYTEDGSVDLKGRPVLRSETGRWKACSFIVG 98

[Close]
BLAST of MELO3C021761 vs. NCBI nr
Match: gi|645259976|ref|XP_008235618.1| (PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Prunus mume])

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-11
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 1 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVG 46
          MA VEEKGS +GR+D+T+D TV  KG P+LRSKTGRWRACSFIVG
Sbjct: 2  MASVEEKGSADGREDHTQDGTVDLKGRPILRSKTGRWRACSFIVG 46

[Close]
BLAST of MELO3C021761 vs. NCBI nr
Match: gi|595791411|ref|XP_007199454.1| (hypothetical protein PRUPE_ppa026888mg [Prunus persica])

HSP 1 Score: 76.6 bits (187), Expect = 1.7e-11
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 1 

Query: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVG 46
          MA VEEKGS +GR+D+T+D TV  KG P+LRSKTGRWRACSFIVG
Sbjct: 1  MASVEEKGSADGREDHTQDGTVDLKGRPILRSKTGRWRACSFIVG 45

The following BLAST results are available for this feature:
BLAST of MELO3C021761 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PTR30_ARATH4.8e-0670.00Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana GN=NPF5.1 PE=2 SV=2[more]
BLAST of MELO3C021761 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LC54_CUCSA3.4e-1490.91Uncharacterized protein OS=Cucumis sativus GN=Csa_3G608170 PE=4 SV=1[more]
A0A061DPK9_THECC7.0e-1277.78Peptide transporter PTR3-A OS=Theobroma cacao GN=TCM_003950 PE=4 SV=1[more]
B9SKP9_RICCO1.2e-1177.78Oligopeptide transporter, putative OS=Ricinus communis GN=RCOM_0543240 PE=4 SV=1[more]
M5VUR8_PRUPE1.2e-1175.56Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026888mg PE=4 SV=1[more]
A0A067K3U8_JATCU1.6e-1173.33Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17647 PE=4 SV=1[more]
BLAST of MELO3C021761 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G40460.12.7e-0770.00 Major facilitator superfamily protein[more]
AT5G46040.11.0e-0658.54 Major facilitator superfamily protein[more]
AT5G46050.11.8e-0658.54 peptide transporter 3[more]
BLAST of MELO3C021761 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659093138|ref|XP_008447390.1|4.8e-1490.91PREDICTED: LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo][more]
gi|449468700|ref|XP_004152059.1|4.8e-1490.91PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis sativus][more]
gi|590715454|ref|XP_007050200.1|1.0e-1177.78Peptide transporter PTR3-A [Theobroma cacao][more]
gi|645259976|ref|XP_008235618.1|1.7e-1175.56PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Prunus mume][more]
gi|595791411|ref|XP_007199454.1|1.7e-1175.56hypothetical protein PRUPE_ppa026888mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000109POT_fam
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006810 transport
cellular_component GO:0016020 membrane
molecular_function GO:0005215 transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021761T1MELO3C021761T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000109Proton-dependent oligopeptide transporter familyPANTHERPTHR11654OLIGOPEPTIDE TRANSPORTER-RELATEDcoord: 1..45
score: 5.2
NoneNo IPR availablePANTHERPTHR11654:SF132SUBFAMILY NOT NAMEDcoord: 1..45
score: 5.2

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021761Watermelon (Charleston Gray)mewcgB134
MELO3C021761Watermelon (Charleston Gray)mewcgB140
MELO3C021761Watermelon (97103) v1mewmB156
MELO3C021761Cucurbita pepo (Zucchini)cpemeB027
MELO3C021761Cucurbita pepo (Zucchini)cpemeB477
MELO3C021761Bottle gourd (USVL1VR-Ls)lsimeB180
MELO3C021761Cucumber (Gy14) v2cgybmeB012
MELO3C021761Cucumber (Chinese Long) v3cucmeB012
MELO3C021761Watermelon (97103) v2mewmbB141
MELO3C021761Wax gourdmewgoB164
MELO3C021761Wax gourdmewgoB182
MELO3C021761Cucurbita maxima (Rimu)cmameB192
MELO3C021761Cucurbita maxima (Rimu)cmameB364
MELO3C021761Cucurbita moschata (Rifu)cmomeB179
MELO3C021761Cucurbita moschata (Rifu)cmomeB357
MELO3C021761Wild cucumber (PI 183967)cpimeB013
MELO3C021761Cucumber (Chinese Long) v2cumeB017