MELO3C021753 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021753
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Retrotransposon protein, putative, Ty3-gypsy subclass
Location	chr12 : 16639664 .. 16640386 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTTGAGATAGAGACAGATGCATCCAGCTATGGAATAGGTGCTGTGCTGATCCAAGGCAAACGACCTATTGCATATTATGGTCACACATTGGCTATAAGAGATAGAGCAAAACCAATGTACGAGAGAGAACTAATGGAAGCGGTCCTAGCAGTTCAAAGATGGAGACTATACCTACTTGGGAGGAAGTTTGTAGTAAAAACATATCAACGGTCACTTAAATTTTTGCTAGAACAAAGAGTGATTCAGCTACAGCATCAGAAATGGATAGCCAAATTTCTTGATGATTCTTTTGAAGTGGTATATAAACCAAGGCTGGAAAATAAGGCTGTTGATGCCTTGTCGAGAATGCCACCTACTTTCCATCTTTACAATCTAACCGCACCAACACCGATTAATCTCGCAGTAATCAAAGAAGAGGTGGAGAAGGATGACCATTTAAAGAAGATAACAACTGAACTGGAGAAATCAGAAGAATTAGAAGGGAAATATTCAATACAACAAGGAATGTTGAAGTATAAGGGTAGAGTGGTGGTTTCTAAATCACCAACATTAATCCCTACAATCTTACATACCTATCATGACTCAATCTTTGGGGGTCATTCTGGATTTTTAAAAACATACAAGCGATTAATTGGTGAGCTGTATTGGATAGGCATGAAACAAGATGTCAAGAAGTACTGTAAAGAGTGCATTAATTTTCAGAGAAACAATCGGTAA

mRNA sequence

ATGTCATTTGAGATAGAGACAGATGCATCCAGCTATGGAATAGGTGCTGTGCTGATCCAAGGCAAACGACCTATTGCATATTATGGTCACACATTGGCTATAAGAGATAGAGCAAAACCAATGTACGAGAGAGAACTAATGGAAGCGGTCCTAGCAGTTCAAAGATGGAGACTATACCTACTTGGGAGGAAGTTTGTAGTAAAAACATATCAACGGTCACTTAAATTTTTGCTAGAACAAAGAGTGATTCAGCTACAGCATCAGAAATGGATAGCCAAATTTCTTGATGATTCTTTTGAAGTGGTATATAAACCAAGGCTGGAAAATAAGGCTGTTGATGCCTTGTCGAGAATGCCACCTACTTTCCATCTTTACAATCTAACCGCACCAACACCGATTAATCTCGCAGTAATCAAAGAAGAGGTGGAGAAGGATGACCATTTAAAGAAGATAACAACTGAACTGGAGAAATCAGAAGAATTAGAAGGGAAATATTCAATACAACAAGGAATGTTGAAGTATAAGGGTAGAGTGGTGGTTTCTAAATCACCAACATTAATCCCTACAATCTTACATACCTATCATGACTCAATCTTTGGGGGTCATTCTGGATTTTTAAAAACATACAAGCGATTAATTGGTGAGCTGTATTGGATAGGCATGAAACAAGATGTCAAGAAGTACTGTAAAGAGTGCATTAATTTTCAGAGAAACAATCGGTAA

Coding sequence (CDS)

ATGTCATTTGAGATAGAGACAGATGCATCCAGCTATGGAATAGGTGCTGTGCTGATCCAAGGCAAACGACCTATTGCATATTATGGTCACACATTGGCTATAAGAGATAGAGCAAAACCAATGTACGAGAGAGAACTAATGGAAGCGGTCCTAGCAGTTCAAAGATGGAGACTATACCTACTTGGGAGGAAGTTTGTAGTAAAAACATATCAACGGTCACTTAAATTTTTGCTAGAACAAAGAGTGATTCAGCTACAGCATCAGAAATGGATAGCCAAATTTCTTGATGATTCTTTTGAAGTGGTATATAAACCAAGGCTGGAAAATAAGGCTGTTGATGCCTTGTCGAGAATGCCACCTACTTTCCATCTTTACAATCTAACCGCACCAACACCGATTAATCTCGCAGTAATCAAAGAAGAGGTGGAGAAGGATGACCATTTAAAGAAGATAACAACTGAACTGGAGAAATCAGAAGAATTAGAAGGGAAATATTCAATACAACAAGGAATGTTGAAGTATAAGGGTAGAGTGGTGGTTTCTAAATCACCAACATTAATCCCTACAATCTTACATACCTATCATGACTCAATCTTTGGGGGTCATTCTGGATTTTTAAAAACATACAAGCGATTAATTGGTGAGCTGTATTGGATAGGCATGAAACAAGATGTCAAGAAGTACTGTAAAGAGTGCATTAATTTTCAGAGAAACAATCGGTAA

Protein sequence

MSFEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLGRKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMPPTFHLYNLTAPTPINLAVIKEEVEKDDHLKKITTELEKSEELEGKYSIQQGMLKYKGRVVVSKSPTLIPTILHTYHDSIFGGHSGFLKTYKRLIGELYWIGMKQDVKKYCKECINFQRNNR*

Homology

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BLAST of MELO3C021753 vs. Swiss-Prot
Match: POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster GN=pol PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10
Identity = 38/116 (32.76%), Postives = 62/116 (53.45%), Query Frame = 1


Query: 3   FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
           F + TDAS+  +GAVL Q   PI++   TL   +      E+EL+  V A + +R YLLG
Sbjct: 508 FVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLG 567

Query: 63  RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRM 119
           R+F++ +  + L++L   +    + ++W  +  +  F++ Y    EN   DALSR+
Sbjct: 568 RQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSRI 623

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BLAST of MELO3C021753 vs. Swiss-Prot
Match: POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster GN=pol PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 3.2e-10
Identity = 39/116 (33.62%), Postives = 57/116 (49.14%), Query Frame = 1


Query: 3   FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
           F + TDAS   +GAVL Q   P++Y   TL   +      E+EL+  V A + +R YLLG
Sbjct: 509 FTLTTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLG 568

Query: 63  RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRM 119
           R F + +  + L +L   +    +  +W  K  +  F++ Y    EN   DALSR+
Sbjct: 569 RHFEISSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSRI 624

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BLAST of MELO3C021753 vs. Swiss-Prot
Match: POLY_DROME (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster GN=pol PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.5e-09
Identity = 42/116 (36.21%), Postives = 60/116 (51.72%), Query Frame = 1


Query: 3   FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
           F++ TDAS+ GIGAVL Q  RPI     TL   ++     EREL+  V A+ + + +L G
Sbjct: 495 FDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKLQNFLYG 554

Query: 63  -RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSR 118
            R+  + T  + L F +  R    + ++W +     + +V YKP  EN   DALSR
Sbjct: 555 SREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADALSR 610

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BLAST of MELO3C021753 vs. TrEMBL
Match: A5B2I6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 3.3e-62
Identity = 117/236 (49.58%), Postives = 160/236 (67.80%), Query Frame = 1


Query: 3    FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
            F +E DAS YG+G VL+Q  RP+AY+   L  R+R K +YERELM  VLAVQ+WR YLLG
Sbjct: 1534 FIVEMDASGYGLGTVLMQSHRPVAYFSQVLTARERQKSIYERELMAIVLAVQKWRHYLLG 1593

Query: 63   RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMPPTF 122
            R F+V+T Q SLKFLLEQR++   +QKW+AK     FE+ ++P  ENKA DALSR+P + 
Sbjct: 1594 RHFIVRTDQSSLKFLLEQRIVNESYQKWVAKLFGYDFEIQFRPGXENKAADALSRIPISM 1653

Query: 123  HLYNLTAPTPINLAVIKEEVEKDDHLKKITTELEKSEELEGKYSIQQGMLKYKGRVVVSK 182
             L  L  P+ I+  +I  +VE D HL KI   L    +   +YS+  G+L YKGR+V+ K
Sbjct: 1654 ELXALMVPSRIDTXLISSQVEADPHLXKIKQRLLXDPDAYPRYSLDHGILLYKGRLVLPK 1713

Query: 183  SPTLIPTILHTYHDSIFGGHSGFLKTYKRLIGELYWIGMKQDVKKYCKECINFQRN 239
            +  L+P +L   H S+ GGHSGFL TYKRL  + +W+GMK D+K++ ++C+  Q+N
Sbjct: 1714 ASPLVPALLQEGHASVVGGHSGFLXTYKRLTRDFFWVGMKNDIKEFVEKCLVCQQN 1769

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BLAST of MELO3C021753 vs. TrEMBL
Match: A5CAG1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018166 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.2e-56
Identity = 110/238 (46.22%), Postives = 158/238 (66.39%), Query Frame = 1


Query: 1   MSFEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYL 60
           +S  +E     YG+GA+L+Q  +P+AY+   L  R R K +YERELM  VLAVQ+WR YL
Sbjct: 393 ISAMVEDGCLGYGLGAILMQSHKPVAYFSQVLRARKRQKSIYERELMAIVLAVQKWRHYL 452

Query: 61  LGRKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMPP 120
           LGR F+V+T Q SLKFLLEQR++   +QKW+AK     FE+ ++P ++NKAVDALSR+P 
Sbjct: 453 LGRHFIVRTDQSSLKFLLEQRIVNESYQKWVAKLFGYDFEIQFRPGMKNKAVDALSRIPI 512

Query: 121 TFHLYNLTAPTPINLAVIKEEVEKDDHLKKITTELEKSEELEGKYSIQQGMLKYKGRVVV 180
           +  L  L  P+ I+ ++I  +VE D  L KI   L    +   +Y++  G+L YKG +V 
Sbjct: 513 SMELAALMVPSRIDTSLISSQVEADPCLAKIKQRLLDDLDAYPRYALDHGILIYKGCLVF 572

Query: 181 SKSPTLIPTILHTYHDSIFGGHSGFLKTYKRLIGELYWIGMKQDVKKYCKECINFQRN 239
            K+  L+P +L   H S+ GGHSGFL TYKRL  + +W+GMK D+K++ ++C+  Q+N
Sbjct: 573 PKASPLVPALLQEGHASVVGGHSGFLWTYKRLTRDFFWVGMKNDIKEFVEKCLVCQQN 630

[Close]

BLAST of MELO3C021753 vs. TrEMBL
Match: A0A087H2T9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G124900 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-56
Identity = 113/231 (48.92%), Postives = 156/231 (67.53%), Query Frame = 1


Query: 3   FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
           F I++DAS  G+GAVL+Q ++PIA++   L  R + K +YERELM  VLA+QRWR YLLG
Sbjct: 124 FVIKSDASGIGLGAVLMQQQKPIAFFSQALTDRQKLKSVYERELMAIVLAIQRWRHYLLG 183

Query: 63  RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMPPTF 122
           RKF+V+T Q+SLKFLLEQR +  ++Q+W+ K L   F++VYKP LENKA DALSR     
Sbjct: 184 RKFLVRTDQKSLKFLLEQREVNAEYQQWLTKILGFDFDIVYKPGLENKAADALSRREGVP 243

Query: 123 HLYNLTAPTPINLAVIKEEVEKDDHLKKITTELEKSEELEGKYSIQQGMLKYKGRVVVSK 182
            L+ L+ P  I L +I+ EV+KD  L KI  E+ ++  L  ++S+ QG L  +G++V+ K
Sbjct: 244 QLFALSIPGAIQLDMIQTEVDKDMELSKIKAEVLQNVGLHPEFSVVQGRLLKQGKLVIPK 303

Query: 183 SPTLIPTILHTYHDSIFGGHSGFLKTYKRLIGELYWIGMKQDVKKYCKECI 234
           S  L+  +LH +H S  GGH G LKT +RL    YW GM  D+K+Y   C+
Sbjct: 304 SSILVRVLLHEFHSSPMGGHGGILKTQRRLGDMFYWKGMMADIKQYVAACL 354

[Close]

BLAST of MELO3C021753 vs. TrEMBL
Match: A0A087H2T8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G124900 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-56
Identity = 113/231 (48.92%), Postives = 156/231 (67.53%), Query Frame = 1


Query: 3   FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
           F I++DAS  G+GAVL+Q ++PIA++   L  R + K +YERELM  VLA+QRWR YLLG
Sbjct: 382 FVIKSDASGIGLGAVLMQQQKPIAFFSQALTDRQKLKSVYERELMAIVLAIQRWRHYLLG 441

Query: 63  RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMPPTF 122
           RKF+V+T Q+SLKFLLEQR +  ++Q+W+ K L   F++VYKP LENKA DALSR     
Sbjct: 442 RKFLVRTDQKSLKFLLEQREVNAEYQQWLTKILGFDFDIVYKPGLENKAADALSRREGVP 501

Query: 123 HLYNLTAPTPINLAVIKEEVEKDDHLKKITTELEKSEELEGKYSIQQGMLKYKGRVVVSK 182
            L+ L+ P  I L +I+ EV+KD  L KI  E+ ++  L  ++S+ QG L  +G++V+ K
Sbjct: 502 QLFALSIPGAIQLDMIQTEVDKDMELSKIKAEVLQNVGLHPEFSVVQGRLLKQGKLVIPK 561

Query: 183 SPTLIPTILHTYHDSIFGGHSGFLKTYKRLIGELYWIGMKQDVKKYCKECI 234
           S  L+  +LH +H S  GGH G LKT +RL    YW GM  D+K+Y   C+
Sbjct: 562 SSILVRVLLHEFHSSPMGGHGGILKTQRRLGDMFYWKGMMADIKQYVAACL 612

[Close]

BLAST of MELO3C021753 vs. TrEMBL
Match: A0A087H2U0_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G124900 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 2.7e-56
Identity = 113/231 (48.92%), Postives = 156/231 (67.53%), Query Frame = 1


Query: 3   FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
           F I++DAS  G+GAVL+Q ++PIA++   L  R + K +YERELM  VLA+QRWR YLLG
Sbjct: 757 FVIKSDASGIGLGAVLMQQQKPIAFFSQALTDRQKLKSVYERELMAIVLAIQRWRHYLLG 816

Query: 63  RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMPPTF 122
           RKF+V+T Q+SLKFLLEQR +  ++Q+W+ K L   F++VYKP LENKA DALSR     
Sbjct: 817 RKFLVRTDQKSLKFLLEQREVNAEYQQWLTKILGFDFDIVYKPGLENKAADALSRREGVP 876

Query: 123 HLYNLTAPTPINLAVIKEEVEKDDHLKKITTELEKSEELEGKYSIQQGMLKYKGRVVVSK 182
            L+ L+ P  I L +I+ EV+KD  L KI  E+ ++  L  ++S+ QG L  +G++V+ K
Sbjct: 877 QLFALSIPGAIQLDMIQTEVDKDMELSKIKAEVLQNVGLHPEFSVVQGRLLKQGKLVIPK 936

Query: 183 SPTLIPTILHTYHDSIFGGHSGFLKTYKRLIGELYWIGMKQDVKKYCKECI 234
           S  L+  +LH +H S  GGH G LKT +RL    YW GM  D+K+Y   C+
Sbjct: 937 SSILVRVLLHEFHSSPMGGHGGILKTQRRLGDMFYWKGMMADIKQYVAACL 987

[Close]

BLAST of MELO3C021753 vs. NCBI nr
Match: gi|729375164|ref|XP_010548864.1| (PREDICTED: uncharacterized protein LOC104820194 [Tarenaya hassleriana])

HSP 1 Score: 251.1 bits (640), Expect = 1.9e-63
Identity = 124/236 (52.54%), Postives = 166/236 (70.34%), Query Frame = 1


Query: 3    FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
            F +ETDAS +GIGAVL+Q  RPIA++   L+ R+R KP+YERELM  VL++QRWR YLLG
Sbjct: 934  FVVETDASGFGIGAVLMQKHRPIAFFSQALSERERLKPVYERELMTVVLSIQRWRHYLLG 993

Query: 63   RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMP--- 122
            R F+V T Q++LKFLLEQR + +++Q+W+ K L   F++VY+P +ENKA D LSRMP   
Sbjct: 994  RSFLVCTDQKALKFLLEQREVSMEYQRWLTKLLGYDFQIVYRPGMENKAADGLSRMPHNA 1053

Query: 123  ---PTFHLYNLTAPTPINLAVIKEEVEKDDHLKKITTELEKSEELEGKYSIQQGMLKYKG 182
               PT     +T P  I L  I++E+ +D  LK+IT +L+  E   GKY + QGML+YK 
Sbjct: 1054 ILEPTCMGLAITIPRNIQLVEIEKEIRQDKDLKEITDKLKDGETKVGKYHLLQGMLRYKN 1113

Query: 183  RVVVSKSPTLIPTILHTYHDSIFGGHSGFLKTYKRLIGELYWIGMKQDVKKYCKEC 233
            R+VVS+  + IPTIL  +HDS  GGHSG L+T KR+    +W+GMK D+KKY  EC
Sbjct: 1114 RLVVSRHSSFIPTILAEFHDSKMGGHSGVLRTLKRIHEIFHWLGMKTDIKKYVAEC 1169

[Close]

BLAST of MELO3C021753 vs. NCBI nr
Match: gi|729344250|ref|XP_010541181.1| (PREDICTED: uncharacterized protein LOC104814705 [Tarenaya hassleriana])

HSP 1 Score: 251.1 bits (640), Expect = 1.9e-63
Identity = 123/236 (52.12%), Postives = 167/236 (70.76%), Query Frame = 1


Query: 3    FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
            F +ETDAS +GIGAVL+Q  RPIA++   L+ R+R KP+YERELM  VL++QRWR YLLG
Sbjct: 1145 FVVETDASGFGIGAVLMQKHRPIAFFSQALSERERLKPVYERELMAVVLSIQRWRHYLLG 1204

Query: 63   RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMP--- 122
            R F+V T Q++LKFLLEQR + +++Q+W+ K L   F++VY+P +ENKA D LSRMP   
Sbjct: 1205 RSFLVCTDQKALKFLLEQREVSMEYQRWLTKLLGYDFQIVYRPGVENKAADGLSRMPHNT 1264

Query: 123  ---PTFHLYNLTAPTPINLAVIKEEVEKDDHLKKITTELEKSEELEGKYSIQQGMLKYKG 182
               PT     +T P  I L  +++E+ +D  LK+I ++L++ E   GKY + QGML+YK 
Sbjct: 1265 ILEPTCMGLAITIPRNIQLVEVEKEIGEDSDLKEIVSKLKEGETKVGKYHLLQGMLRYKN 1324

Query: 183  RVVVSKSPTLIPTILHTYHDSIFGGHSGFLKTYKRLIGELYWIGMKQDVKKYCKEC 233
            R+VVSK  + IPTIL  +HDS  GGHSG L+T KR+    +W+GMK D+KKY  EC
Sbjct: 1325 RLVVSKHSSFIPTILAEFHDSKMGGHSGVLRTLKRIQELFHWVGMKADIKKYVAEC 1380

[Close]

BLAST of MELO3C021753 vs. NCBI nr
Match: gi|729344250|ref|XP_010541181.1| (PREDICTED: uncharacterized protein LOC104814705 [Tarenaya hassleriana])

HSP 1 Score: 149.8 bits (377), Expect = 6.0e-33
Identity = 69/117 (58.97%), Postives = 92/117 (78.63%), Query Frame = 1


Query: 3   FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
           F +ETDAS +GIGAVL+Q  RPIA++   L+ R+R KP+YERELM  VL++QRWR YLLG
Sbjct: 273 FVVETDASGFGIGAVLMQKHRPIAFFSQALSERERLKPVYERELMAVVLSIQRWRHYLLG 332

Query: 63  RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMP 120
           R F+V T Q++LKFLLEQR + +++Q+W+ K L   F++VY+P +ENKA D LSRMP
Sbjct: 333 RSFLVCTDQKALKFLLEQREVSMEYQRWLTKLLGYDFQIVYRPGVENKAADGLSRMP 389

HSP 2 Score: 246.5 bits (628), Expect = 4.7e-62
Identity = 117/236 (49.58%), Postives = 160/236 (67.80%), Query Frame = 1


Query: 3    FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
            F +E DAS YG+G VL+Q  RP+AY+   L  R+R K +YERELM  VLAVQ+WR YLLG
Sbjct: 1534 FIVEMDASGYGLGTVLMQSHRPVAYFSQVLTARERQKSIYERELMAIVLAVQKWRHYLLG 1593

Query: 63   RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMPPTF 122
            R F+V+T Q SLKFLLEQR++   +QKW+AK     FE+ ++P  ENKA DALSR+P + 
Sbjct: 1594 RHFIVRTDQSSLKFLLEQRIVNESYQKWVAKLFGYDFEIQFRPGXENKAADALSRIPISM 1653

Query: 123  HLYNLTAPTPINLAVIKEEVEKDDHLKKITTELEKSEELEGKYSIQQGMLKYKGRVVVSK 182
             L  L  P+ I+  +I  +VE D HL KI   L    +   +YS+  G+L YKGR+V+ K
Sbjct: 1654 ELXALMVPSRIDTXLISSQVEADPHLXKIKQRLLXDPDAYPRYSLDHGILLYKGRLVLPK 1713

Query: 183  SPTLIPTILHTYHDSIFGGHSGFLKTYKRLIGELYWIGMKQDVKKYCKECINFQRN 239
            +  L+P +L   H S+ GGHSGFL TYKRL  + +W+GMK D+K++ ++C+  Q+N
Sbjct: 1714 ASPLVPALLQEGHASVVGGHSGFLXTYKRLTRDFFWVGMKNDIKEFVEKCLVCQQN 1769

[Close]

BLAST of MELO3C021753 vs. NCBI nr
Match: gi|923614274|ref|XP_013745228.1| (PREDICTED: uncharacterized protein LOC106447810 [Brassica napus])

HSP 1 Score: 235.7 bits (600), Expect = 8.3e-59
Identity = 118/236 (50.00%), Postives = 154/236 (65.25%), Query Frame = 1


Query: 3    FEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYLLG 62
            F IE+DAS  G+GAVL+Q +RPIAY+   L  R + K +YERELM  V A+Q+WR YLLG
Sbjct: 939  FVIESDASGVGLGAVLMQRQRPIAYFSQALTERQQMKSVYERELMAIVFAIQKWRHYLLG 998

Query: 63   RKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMPPTF 122
            RKFVV+T Q+SLKFLLEQR I +++Q+W+ K L   F++ YKP LENKA DALSR  P  
Sbjct: 999  RKFVVRTDQKSLKFLLEQREINMEYQRWLTKILGFDFDIHYKPGLENKAADALSRKSPVT 1058

Query: 123  HLYNLTAPTPINLAVIKEEVEKDDHLKKITTELEKSEELEGKYSIQQGMLKYKGRVVVSK 182
             L+ ++ P  I L  +  EVE+D  L K+  EL +       Y++ QG L   G++V+ K
Sbjct: 1059 ELFAVSVPVSIQLEEVGSEVERDSELSKLIQELTQDPSSHPDYTLVQGRLLRHGKLVLPK 1118

Query: 183  SPTLIPTILHTYHDSIFGGHSGFLKTYKRLIGELYWIGMKQDVKKYCKECINFQRN 239
            +  LI  IL  YHDS +GGH G LKT KR+ G  YW GM  D++KY   C   QR+
Sbjct: 1119 TSKLIELILKEYHDSKYGGHGGVLKTQKRIGGLFYWAGMMTDIRKYVASCQTCQRH 1174

[Close]

BLAST of MELO3C021753 vs. NCBI nr
Match: gi|147807720|emb|CAN66553.1| (hypothetical protein VITISV_018166 [Vitis vinifera])

HSP 1 Score: 228.0 bits (580), Expect = 1.7e-56
Identity = 110/238 (46.22%), Postives = 158/238 (66.39%), Query Frame = 1


Query: 1   MSFEIETDASSYGIGAVLIQGKRPIAYYGHTLAIRDRAKPMYERELMEAVLAVQRWRLYL 60
           +S  +E     YG+GA+L+Q  +P+AY+   L  R R K +YERELM  VLAVQ+WR YL
Sbjct: 393 ISAMVEDGCLGYGLGAILMQSHKPVAYFSQVLRARKRQKSIYERELMAIVLAVQKWRHYL 452

Query: 61  LGRKFVVKTYQRSLKFLLEQRVIQLQHQKWIAKFLDDSFEVVYKPRLENKAVDALSRMPP 120
           LGR F+V+T Q SLKFLLEQR++   +QKW+AK     FE+ ++P ++NKAVDALSR+P 
Sbjct: 453 LGRHFIVRTDQSSLKFLLEQRIVNESYQKWVAKLFGYDFEIQFRPGMKNKAVDALSRIPI 512

Query: 121 TFHLYNLTAPTPINLAVIKEEVEKDDHLKKITTELEKSEELEGKYSIQQGMLKYKGRVVV 180
           +  L  L  P+ I+ ++I  +VE D  L KI   L    +   +Y++  G+L YKG +V 
Sbjct: 513 SMELAALMVPSRIDTSLISSQVEADPCLAKIKQRLLDDLDAYPRYALDHGILIYKGCLVF 572

Query: 181 SKSPTLIPTILHTYHDSIFGGHSGFLKTYKRLIGELYWIGMKQDVKKYCKECINFQRN 239
            K+  L+P +L   H S+ GGHSGFL TYKRL  + +W+GMK D+K++ ++C+  Q+N
Sbjct: 573 PKASPLVPALLQEGHASVVGGHSGFLWTYKRLTRDFFWVGMKNDIKEFVEKCLVCQQN 630

The following BLAST results are available for this feature:

BLAST of MELO3C021753 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POL2_DROME	1.4e-10	32.76	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
POL3_DROME	3.2e-10	33.62	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
POLY_DROME	3.5e-09	36.21	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]

BLAST of MELO3C021753 vs. TrEMBL


Match Name	E-value	Identity	Description
A5B2I6_VITVI	3.3e-62	49.58	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043911 PE=4 SV=1	[more]
A5CAG1_VITVI	1.2e-56	46.22	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018166 PE=4 SV=1	[more]
A0A087H2T9_ARAAL	2.7e-56	48.92	Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G124900 PE=4 SV=1	[more]
A0A087H2T8_ARAAL	2.7e-56	48.92	Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G124900 PE=4 SV=1	[more]
A0A087H2U0_ARAAL	2.7e-56	48.92	Uncharacterized protein OS=Arabis alpina GN=AALP_AA4G124900 PE=4 SV=1	[more]

BLAST of MELO3C021753 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|729375164\|ref\|XP_010548864.1\|	1.9e-63	52.54	PREDICTED: uncharacterized protein LOC104820194 [Tarenaya hassleriana]	[more]
gi\|729344250\|ref\|XP_010541181.1\|	1.9e-63	52.12	PREDICTED: uncharacterized protein LOC104814705 [Tarenaya hassleriana]	[more]
gi\|729344250\|ref\|XP_010541181.1\|	6.0e-33	58.97	PREDICTED: uncharacterized protein LOC104814705 [Tarenaya hassleriana]	[more]
gi\|923614274\|ref\|XP_013745228.1\|	8.3e-59	50.00	PREDICTED: uncharacterized protein LOC106447810 [Brassica napus]	[more]
gi\|147807720\|emb\|CAN66553.1\|	1.7e-56	46.22	hypothetical protein VITISV_018166 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0090304	nucleic acid metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003824	catalytic activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021753T1	MELO3C021753T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 3..238 score: 3.8
None	No IPR available	PANTHER	PTHR24559:SF186	SUBFAMILY NOT NAMED	coord: 3..238 score: 3.8
None	No IPR available	unknown	SSF56672	DNA/RNA polymerases	coord: 2..104 score: 1.78

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021753	Watermelon (97103) v2	mewmbB141
MELO3C021753	Wax gourd	mewgoB164
MELO3C021753	Cucumber (Gy14) v1	cgymeB033
MELO3C021753	Cucurbita maxima (Rimu)	cmameB192
MELO3C021753	Cucurbita maxima (Rimu)	cmameB364
MELO3C021753	Cucurbita moschata (Rifu)	cmomeB179
MELO3C021753	Cucurbita moschata (Rifu)	cmomeB357
MELO3C021753	Wild cucumber (PI 183967)	cpimeB013
MELO3C021753	Cucumber (Chinese Long) v2	cumeB017
MELO3C021753	Watermelon (Charleston Gray)	mewcgB140
MELO3C021753	Watermelon (97103) v1	mewmB156
MELO3C021753	Cucurbita pepo (Zucchini)	cpemeB027
MELO3C021753	Cucurbita pepo (Zucchini)	cpemeB477
MELO3C021753	Bottle gourd (USVL1VR-Ls)	lsimeB180
MELO3C021753	Cucumber (Gy14) v2	cgybmeB012
MELO3C021753	Silver-seed gourd	carmeB0119
MELO3C021753	Cucumber (Chinese Long) v3	cucmeB012