MELO3C021744 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021744
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pentatricopeptide repeat-containing protein, putative
Location	chr12 : 16439047 .. 16441340 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATATACTTACAACCGGGATGTTGTGGAAGTAATTTTAGATGCACAGTGAAATGCGGAGACAGTGAAGTTGTAGAGAAATCCAGACGTGATGGGCTTTATGTTGATAAACAAGGAAAATTTAGAAGCTTCAATCGCAAAAGATTGTCAAGAAAACGATGTAAGATATGCTACAAACTGGAAACTCTGTTTAGTACTTTAGTTTTGGCTTATATTATCTGTATTAAAACTATCACTTTGTCCAGGTGGTTCCTTGAGGGGACGAGGATGGAAGTATGGATCTGGTTTTGTTGATGGAATCTTCCCTGTTTTGGGCCCTCTTGCTCAACAGATTATGGAGTTTTTAAGGGAAGAAGTAGATTATATGGGACTCTGGGATTCTCTTGACACACTACCTGCCACTAATTCAACTTGGGATGATATCATCAGTGTAGCTGTGCAACTTCGTCTCAATAAGAAGTGGGGTCCAATCATATTGGTAGGAATTTAATCTGATGATTTAGTCATACAACAAACCAAATCCAAGGCTTCCTTAACTTCTTTGCTTCTTTTTTCTTTCAATGGTTTTATGCTTATAGTTTAGTTAGAGGGTAAGACAAATAGTTATGCAAATTCATGGGATGAGAGAATTTCATGCTAGCTGGACAGAGAATGGATTAAACAAAATCCCAGGTCATAGCGTGCTTTCCTTTTGTGTATGTGAAGAGAGAGTTCATGCAATCCTATGAATATTTTGAATGGATTAAACAATTGTCAGGAGAGAGAGAAGGAGAGAGAGAGAGCCTTATGTTCATCAAAGTGTCTTTGTGCTTTGTGCAACTTGTGCTTATACTTGCTATTTCTGCTGAAATTCTATAGATATGTGAATGGATATTGAACAAGAGTACCTTCCGACCAGATGTGATTGTGTACAATCTACTTATGGATGCTTATGGGCAGCGATCACTGTATAAGGATGTAGAATCTACATACTTAGAACTTCTTGAATCTCACTGCATTCCAACAGAAGATACTTATGCACTTCTTCTAAAGGCCTATTGCAAATCTGGATTGCTAGAGAAGGCTGAAGCTGTCTTTGCTGAAATGCGAAAGTATGGCCTTTCACCAAGTATGTTTATTATTCATTAGTCATCTACTACGAGGTAGCTAGTATCATCGATTTTTAAGGGCTTAGAACTTTAAGAAGACAATTGATATTATAACATTTTGCTGTTTGTTGCATGTTTTTCGGTATTAAATTTCTCTTCAAAGATAACTTTTAGTCATACAAAAATAATTATTTGTCCTGCATTTATATTTTTATTTTTATTTTATTTTTATTTTTTCCCAGTCACGAAGACTAATGATGAATATGAATAAACAAGCCATTTCTTCCATGTCATCTCAACTCATGTGGCTAGTTTTTTGTGCTTTCAGGTAATTTGAATTTTGTAGTAGAGAATATTTGGTATTTCCCCAACACCAGAACCTCATTATCTCTAAAATTAACAATGATTTCCATCAAAGAATCAGCGGATAAACCATTATCCTTGTCAAAGATCTTGCAGAACTGCCTTATCATTCTTTTTGCAGAGTGAATGGCATGAATTGATCCCATGTTAGCACTAACAGATATCCATATTGGTTTTGTCTACTACGGCTATGCTACTACCCTGCAAATGTTTGTGCATACTGAGTTTGGGGAAACTTACGAGCAAAGAATGAATAACTTTTTATTGAAGAAATCTGAACATATTATAAAATTCTCTTACAATTATATTGAACTAGTGATCATGATGAGAATTAAATAACAAGTGAAAGCTAATAGGAATGTTAGATTTTTGGGAGGAAGGGTAAGCAAGCAGGTGACCCATTGTGAGTTCCCAAGTGCTATTTTTCTGATTTCCAGTTCAGGATTTCCAAAAATATGCACACAAATTACTAACTTTAGTTTTAGGGGAAGCACACTATTTCCTTTTTGTAGCTGGTCTGCAATCATCATTTATATGATACTCTTTTTTTTTTTTCATTTATCATTATTTTTCTTTCTGTAAATATATTGATGATACTCTGAAAGTCATAGGACAATATTGCTACAAGTGGCATGAGAAATTGAATGTTTGCCTTGCAAGATGGCTTAACAGAAACGAAAAAGAAAATTGAAATTTATGTACATACAGGTGCAATTGTGTATAATGCTTACATTGATGGACTGGTAAAGGGTGGAAACAATGTCAAAGCAGTGGAAATCTTTCAGAGGATGAAGAGAGATGGCTGCCAACCCGCTACGGATACGTACACAATGTTAATAAACGT

mRNA sequence

ACATATACTTACAACCGGGATGTTGTGGAAGTAATTTTAGATGCACAGTGAAATGCGGAGACAGTGAAGTTGTAGAGAAATCCAGACGTGATGGGCTTTATGTTGATAAACAAGGAAAATTTAGAAGCTTCAATCGCAAAAGATTGTCAAGAAAACGATGTGGTTCCTTGAGGGGACGAGGATGGAAGTATGGATCTGGTTTTGTTGATGGAATCTTCCCTGTTTTGGGCCCTCTTGCTCAACAGATTATGGAGTTTTTAAGGGAAGAAGTAGATTATATGGGACTCTGGGATTCTCTTGACACACTACCTGCCACTAATTCAACTTGGGATGATATCATCAGTGTAGCTGTGCAACTTCGTCTCAATAAGAAGTGGGGTCCAATCATATTGATATGTGAATGGATATTGAACAAGAGTACCTTCCGACCAGATGTGATTGTGTACAATCTACTTATGGATGCTTATGGGCAGCGATCACTGTATAAGGATGTAGAATCTACATACTTAGAACTTCTTGAATCTCACTGCATTCCAACAGAAGATACTTATGCACTTCTTCTAAAGGCCTATTGCAAATCTGGATTGCTAGAGAAGGCTGAAGCTGTCTTTGCTGAAATGCGAAAGTATGGCCTTTCACCAATCACGAAGACTAATGATGAATATGAATAAACAAGCCATTTCTTCCATGTCATCTCAACTCATGTGGCTAGTTTTTTGTGCTTTCAGGTGCAATTGTGTATAATGCTTACATTGATGGACTGGTAAAGGGTGGAAACAATGTCAAAGCAGTGGAAATCTTTCAGAGGATGAAGAGAGATGGCTGCCAACCCGCTACGGATACGTACACAATGTTAATAAACGT

Coding sequence (CDS)

ATGGAGTTTTTAAGGGAAGAAGTAGATTATATGGGACTCTGGGATTCTCTTGACACACTACCTGCCACTAATTCAACTTGGGATGATATCATCAGTGTAGCTGTGCAACTTCGTCTCAATAAGAAGTGGGGTCCAATCATATTGATATGTGAATGGATATTGAACAAGAGTACCTTCCGACCAGATGTGATTGTGTACAATCTACTTATGGATGCTTATGGGCAGCGATCACTGTATAAGGATGTAGAATCTACATACTTAGAACTTCTTGAATCTCACTGCATTCCAACAGAAGATACTTATGCACTTCTTCTAAAGGCCTATTGCAAATCTGGATTGCTAGAGAAGGCTGAAGCTGTCTTTGCTGAAATGCGAAAGTATGGCCTTTCACCAATCACGAAGACTAATGATGAATATGAATAA

Protein sequence

MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSPITKTNDEYE*

Homology

[Close]

BLAST of MELO3C021744 vs. Swiss-Prot
Match: PP186_ARATH (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana GN=At2g35130 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 9.2e-42
Identity = 78/133 (58.65%), Postives = 105/133 (78.95%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           + F+++E D   + D L  LP+T+++WDD+I+V+VQLRLNKKW  IIL+CEWIL KS+F+
Sbjct: 93  LSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQ 152

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           PDVI +NLL+DAYGQ+  YK+ ES Y++LLES  +PTEDTYALL+KAYC +GL+E+AE V
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212

Query: 121 FAEMRKYGLSPIT 134
             EM+ + +SP T
Sbjct: 213 LVEMQNHHVSPKT 225

HSP 2 Score: 55.8 bits (133), Expect = 4.3e-07
Identity = 27/83 (32.53%), Postives = 43/83 (51.81%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           L +    PDV VYN LM++Y +          +  +    C P   +Y +++ AY ++GL
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384

Query: 114 LEKAEAVFAEMRKYGLSPITKTN 137
              AEAVF EM++ G++P  K++
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSH 407

HSP 3 Score: 52.8 bits (125), Expect = 3.6e-06
Identity = 25/78 (32.05%), Postives = 40/78 (51.28%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + +   +P    YNL+++ YG+ S        Y E+    C P   TY  L+ A+ + GL
Sbjct: 255 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 314

Query: 114 LEKAEAVFAEMRKYGLSP 132
            EKAE +F ++++ GL P
Sbjct: 315 CEKAEEIFEQLQEDGLEP 332

HSP 4 Score: 48.5 bits (114), Expect = 6.9e-05
Identity = 24/85 (28.24%), Postives = 41/85 (48.24%), Query Frame = 1


Query: 50  CEWI---LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLK 109
           CE I   ++++   PD  V N +++ YG+   +  +E    E+    C     TY +L+ 
Sbjct: 423 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 482

Query: 110 AYCKSGLLEKAEAVFAEMRKYGLSP 132
            Y K+G LE+ E +F E+++    P
Sbjct: 483 IYGKAGFLERIEELFVELKEKNFRP 507

[Close]

BLAST of MELO3C021744 vs. Swiss-Prot
Match: PP287_ARATH (Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN=At3g59040 PE=2 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 8.7e-08
Identity = 28/78 (35.90%), Postives = 46/78 (58.97%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + +S  +PDV+ Y LL+ AYG+    ++  S + E+L++   PT   Y +LL A+  SG+
Sbjct: 305 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 364

Query: 114 LEKAEAVFAEMRKYGLSP 132
           +E+A+ VF  MR+  + P
Sbjct: 365 VEQAKTVFKSMRRDRIFP 382

HSP 2 Score: 41.6 bits (96), Expect = 8.4e-03
Identity = 26/71 (36.62%), Postives = 36/71 (50.70%), Query Frame = 1


Query: 64  IVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAE 123
           + YN LM      + YK+V   Y ++  S   P   +YALL+KAY ++   E+A +VF E
Sbjct: 283 VTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEE 342

Query: 124 MRKYGLSPITK 135
           M   G+ P  K
Sbjct: 343 MLDAGVRPTHK 350

[Close]

BLAST of MELO3C021744 vs. Swiss-Prot
Match: PP178_ARATH (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.9e-07
Identity = 24/70 (34.29%), Postives = 38/70 (54.29%), Query Frame = 1


Query: 60  RPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEA 119
           + DV+ YN L+  YG++  Y +V+  + E+   H +P   TY+ L+  Y K GL ++A  
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535

Query: 120 VFAEMRKYGL 130
           +F E +  GL
Sbjct: 536 IFREFKSAGL 545

HSP 2 Score: 48.1 bits (113), Expect = 9.0e-05
Identity = 23/71 (32.39%), Postives = 38/71 (53.52%), Query Frame = 1


Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           P+++ Y+ L+D Y +  LYK+    + E   +        Y+ L+ A CK+GL+  A ++
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSL 571

Query: 121 FAEMRKYGLSP 132
             EM K G+SP
Sbjct: 572 IDEMTKEGISP 582

HSP 3 Score: 34.3 bits (77), Expect = 1.3e+00
Identity = 15/31 (48.39%), Postives = 21/31 (67.74%), Query Frame = 1


Query: 101 YALLLKAYCKSGLLEKAEAVFAEMRKYGLSP 132
           ++ L+ AY +SGL E+A +VF  M++YGL P
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRP 301

[Close]

BLAST of MELO3C021744 vs. Swiss-Prot
Match: PP426_ARATH (Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidopsis thaliana GN=EMB1006 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.4e-07
Identity = 32/124 (25.81%), Postives = 56/124 (45.16%), Query Frame = 1


Query: 13  LWDSLDTLPATNSTWD-DIISVAVQLRLNKKWGPIILICEWILNKSTFRPDVIVYNLLMD 72
           +W+  + +      W  D+    V+   ++      L+ +  + K   R + IVYN LMD
Sbjct: 328 VWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD 387

Query: 73  AYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSP 132
           AY + +  ++VE  + E+ +    P+  TY +L+ AY +    +  E +  EM   GL P
Sbjct: 388 AYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEP 447

Query: 133 ITKT 136
             K+
Sbjct: 448 NVKS 451

HSP 2 Score: 45.8 bits (107), Expect = 4.5e-04
Identity = 27/76 (35.53%), Postives = 39/76 (51.32%), Query Frame = 1


Query: 61  PDVIVYNLLMDAYGQRSLYKDVES-TYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEA 120
           P+V  Y  L+ AYG+     D+ +  +L + +    P+  +Y  L+ AY  SG  EKA A
Sbjct: 447 PNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506

Query: 121 VFAEMRKYGLSPITKT 136
            F EM K G+ P  +T
Sbjct: 507 SFEEMCKEGIKPSVET 522

[Close]

BLAST of MELO3C021744 vs. Swiss-Prot
Match: PP133_ARATH (Pentatricopeptide repeat-containing protein At1g79540 OS=Arabidopsis thaliana GN=At1g79540 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.6e-06
Identity = 26/75 (34.67%), Postives = 40/75 (53.33%), Query Frame = 1


Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           PD   YN ++ A   R L ++  S  LE+ E+   P   T+ +L+ + C++GL+ +AE +
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430

Query: 121 FAEMRKYGLSPITKT 136
           F E+ K G SP   T
Sbjct: 431 FTEIEKSGCSPSVAT 445

[Close]

BLAST of MELO3C021744 vs. TrEMBL
Match: A0A0A0M168_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701920 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 6.2e-69
Identity = 129/131 (98.47%), Postives = 131/131 (100.00%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           MEF+REEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWI+NKSTFR
Sbjct: 93  MEFVREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWIMNKSTFR 152

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV
Sbjct: 153 PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 212

Query: 121 FAEMRKYGLSP 132
           FAEMRKYGLSP
Sbjct: 213 FAEMRKYGLSP 223

[Close]

BLAST of MELO3C021744 vs. TrEMBL
Match: A0A0A0M168_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701920 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.7e-05
Identity = 25/83 (30.12%), Postives = 47/83 (56.63%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + ++ + PDV  YN LM++Y +          +  +    C P   +Y +++ AY ++GL
Sbjct: 321 MQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 380

Query: 114 LEKAEAVFAEMRKYGLSPITKTN 137
            E A+AVF EM++ G++P  K++
Sbjct: 381 HEDAQAVFEEMKRIGITPTMKSH 403

HSP 2 Score: 47.8 bits (112), Expect = 1.3e-02
Identity = 22/72 (30.56%), Postives = 38/72 (52.78%), Query Frame = 1


Query: 60  RPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEA 119
           +P    Y +L++ YG+ S     ++ + E+    C P   T+  L+ A  + GL EKAE 
Sbjct: 257 QPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEE 316

Query: 120 VFAEMRKYGLSP 132
           +F +M++ G  P
Sbjct: 317 IFEQMQEAGYEP 328

HSP 3 Score: 44.7 bits (104), Expect = 1.1e-01
Identity = 20/78 (25.64%), Postives = 40/78 (51.28%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           ++KS  +PD  V N +++ YG+   +  +E  +  + +  C     TY +L+  Y ++G 
Sbjct: 426 MHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGF 485

Query: 114 LEKAEAVFAEMRKYGLSP 132
           +E+ E +F  +    L P
Sbjct: 486 VERMEELFQLLPAKNLEP 503

HSP 4 Score: 40.0 bits (92), Expect = 2.7e+00
Identity = 22/78 (28.21%), Postives = 31/78 (39.74%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + K    P  IVYN  +D   +          +  +    C PT DTY +L+  Y K   
Sbjct: 216 MRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESK 275

Query: 114 LEKAEAVFAEMRKYGLSP 132
              A+ +F EMR     P
Sbjct: 276 SHMAQNIFDEMRTQRCKP 293

HSP 5 Score: 208.4 bits (529), Expect = 5.8e-51
Identity = 98/139 (70.50%), Postives = 118/139 (84.89%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           ++ +++EVD   +W+ LDTLPA+++ WDDII+VAVQLRLNK+WG IILICEWIL KS+F+
Sbjct: 36  LDLVQKEVDKSSIWEILDTLPASHTIWDDIINVAVQLRLNKQWGSIILICEWILYKSSFK 95

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           PDVI YNLL+DAYGQ+S +K  ESTYLELLE+ CIPTEDTYALLL+AYCKSGLL+KAEAV
Sbjct: 96  PDVICYNLLLDAYGQKSQHKAAESTYLELLEARCIPTEDTYALLLRAYCKSGLLDKAEAV 155

Query: 121 FAEMRKYGLSPITKTNDEY 140
           F EMRKYGL P     D Y
Sbjct: 156 FGEMRKYGLPPSAIVFDAY 174

[Close]

BLAST of MELO3C021744 vs. TrEMBL
Match: M5WHJ6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004057mg PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-04
Identity = 25/83 (30.12%), Postives = 44/83 (53.01%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + ++   PDV  YN LM+AY +          +  +    C P   +Y +++ AY ++GL
Sbjct: 264 MQEAGHEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 323

Query: 114 LEKAEAVFAEMRKYGLSPITKTN 137
            E AE  F EM++ G++P  K++
Sbjct: 324 HEDAEVAFEEMKRLGITPTVKSH 346

HSP 2 Score: 45.4 bits (106), Expect = 6.5e-02
Identity = 22/78 (28.21%), Postives = 37/78 (47.44%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + +   +P    Y  L++ YG+          + E+    C P   TY  L+ A+ + GL
Sbjct: 194 MKRDQCQPSTDTYTTLINLYGKERKSHMALKLFHEMRSQKCKPNICTYTALVNAFAREGL 253

Query: 114 LEKAEAVFAEMRKYGLSP 132
            EKAE +F +M++ G  P
Sbjct: 254 CEKAEEIFEQMQEAGHEP 271

HSP 3 Score: 39.7 bits (91), Expect = 3.6e+00
Identity = 24/85 (28.24%), Postives = 38/85 (44.71%), Query Frame = 1


Query: 50  CEWILN---KSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLK 109
           CE I+N   KS    D  V N +++ YG+    K +E     + +        TY +L+ 
Sbjct: 362 CEDIVNQMQKSGLELDTFVINSMLNLYGRLGQLKKMEEVLTAMEKGPYAADISTYNILIN 421

Query: 110 AYCKSGLLEKAEAVFAEMRKYGLSP 132
            Y ++G  EK E +F  +    L P
Sbjct: 422 IYGRAGFFEKMEELFQSLPTKNLKP 446

HSP 4 Score: 203.0 bits (515), Expect = 2.4e-49
Identity = 94/139 (67.63%), Postives = 118/139 (84.89%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           ++FL++EVD   +W SLD L  ++STWDD+I+VAVQLRLNKKW PI+L+CEWIL +S+F+
Sbjct: 49  LDFLQQEVDADRVWGSLDNLSPSHSTWDDLINVAVQLRLNKKWDPIVLLCEWILQRSSFQ 108

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
            DV+ +NLL+DAYGQ+SLYK VESTYLELLE+ C+PTEDTYALL+KAYC +GL +KAEAV
Sbjct: 109 LDVMCFNLLIDAYGQKSLYKKVESTYLELLEARCVPTEDTYALLVKAYCTAGLKQKAEAV 168

Query: 121 FAEMRKYGLSPITKTNDEY 140
           FAEMRKYGLSP     + Y
Sbjct: 169 FAEMRKYGLSPSATVYNAY 187

[Close]

BLAST of MELO3C021744 vs. TrEMBL
Match: A0A0B0MYE2_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_09329 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.2e-03
Identity = 28/96 (29.17%), Postives = 47/96 (48.96%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKD-------------VESTYLELLESHCIPTEDT 113
           L ++   PDV  YN LM+AY     + D                 +  +    C P   +
Sbjct: 277 LQEAGHEPDVYAYNALMEAYRSMQSFVDPLVPNSRAGYPYGAAEVFSLMQHMGCEPDRAS 336

Query: 114 YALLLKAYCKSGLLEKAEAVFAEMRKYGLSPITKTN 137
           + +++ AY ++GL E AE+VF EM+K G++P  K++
Sbjct: 337 FNIMVDAYGRAGLYEDAESVFEEMKKLGITPTMKSH 372

HSP 2 Score: 43.9 bits (102), Expect = 1.9e-01
Identity = 21/66 (31.82%), Postives = 35/66 (53.03%), Query Frame = 1


Query: 66  YNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMR 125
           Y L+++ YG+ S        + E+    C P   TY  L+ A+ + GL EKAE +F +++
Sbjct: 219 YTLMINLYGKASKSYMALKLFDEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ 278

Query: 126 KYGLSP 132
           + G  P
Sbjct: 279 EAGHEP 284

HSP 3 Score: 200.7 bits (509), Expect = 1.2e-48
Identity = 93/139 (66.91%), Postives = 117/139 (84.17%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           ++F++EEVD   +W SLD L  T++TWDD+I+VAVQLR+NKKW PI+LICEWIL++S+F+
Sbjct: 172 LDFVQEEVDANRVWGSLDNLSPTHNTWDDLINVAVQLRINKKWDPIVLICEWILHRSSFQ 231

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
            DV+ +NLL+DAYG++S YK VESTYLELLE+ CIPTEDTYALL+KAYC +GL +KAEAV
Sbjct: 232 LDVMCFNLLIDAYGKKSQYKKVESTYLELLEAQCIPTEDTYALLIKAYCSAGLKQKAEAV 291

Query: 121 FAEMRKYGLSPITKTNDEY 140
           FAEMRKYGL P     D Y
Sbjct: 292 FAEMRKYGLPPSAIVYDAY 310

[Close]

BLAST of MELO3C021744 vs. TrEMBL
Match: A0A061GEK3_THECC (Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_029401 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 4.8e-05
Identity = 26/83 (31.33%), Postives = 46/83 (55.42%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           L ++   PDV  YN LM+AY +          +  +    C P   ++ +++ AY ++GL
Sbjct: 400 LQEAGHEPDVYAYNALMEAYSRAGYPYGAAEVFSLMQHMGCEPDRASFNIMVDAYGRAGL 459

Query: 114 LEKAEAVFAEMRKYGLSPITKTN 137
            + AEAVF EM++ G++P  K++
Sbjct: 460 YQDAEAVFEEMKRLGITPTMKSH 482

HSP 2 Score: 45.1 bits (105), Expect = 8.5e-02
Identity = 21/68 (30.88%), Postives = 36/68 (52.94%), Query Frame = 1


Query: 64  IVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAE 123
           + Y L+++ YG+ S        + E+    C P   TY  L+ A+ + GL EKAE +F +
Sbjct: 340 VTYTLMINLYGKASKSYMALKLFDEMRSQKCKPNICTYTALVNAFAREGLCEKAEEIFEQ 399

Query: 124 MRKYGLSP 132
           +++ G  P
Sbjct: 400 LQEAGHEP 407

HSP 3 Score: 198.7 bits (504), Expect = 4.6e-48
Identity = 92/139 (66.19%), Postives = 117/139 (84.17%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           ++FL++EVD   +W SLD L  ++STWDD+I+VAVQLRLNKKW PI+L+CEWIL +S+F+
Sbjct: 112 LDFLQQEVDADRVWGSLDNLSPSHSTWDDLINVAVQLRLNKKWDPIVLLCEWILQRSSFQ 171

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
            DV+ +NLL+DAYGQ+SLYK VES YLELLE+ C+PTEDTYALL+KAYC +GL +KAEAV
Sbjct: 172 LDVMCFNLLIDAYGQKSLYKKVESKYLELLEARCVPTEDTYALLVKAYCTAGLKQKAEAV 231

Query: 121 FAEMRKYGLSPITKTNDEY 140
           FAEMRK+GLSP     + Y
Sbjct: 232 FAEMRKHGLSPSATVYNAY 250

[Close]

BLAST of MELO3C021744 vs. TAIR10
Match: AT2G35130.2 (AT2G35130.2 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 171.0 bits (432), Expect = 5.2e-43
Identity = 78/133 (58.65%), Postives = 105/133 (78.95%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           + F+++E D   + D L  LP+T+++WDD+I+V+VQLRLNKKW  IIL+CEWIL KS+F+
Sbjct: 115 LSFIQKETDPDKVADVLGALPSTHASWDDLINVSVQLRLNKKWDSIILVCEWILRKSSFQ 174

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           PDVI +NLL+DAYGQ+  YK+ ES Y++LLES  +PTEDTYALL+KAYC +GL+E+AE V
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234

Query: 121 FAEMRKYGLSPIT 134
             EM+ + +SP T
Sbjct: 235 LVEMQNHHVSPKT 247

HSP 2 Score: 55.8 bits (133), Expect = 2.4e-08
Identity = 27/83 (32.53%), Postives = 43/83 (51.81%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           L +    PDV VYN LM++Y +          +  +    C P   +Y +++ AY ++GL
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406

Query: 114 LEKAEAVFAEMRKYGLSPITKTN 137
              AEAVF EM++ G++P  K++
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSH 429

HSP 3 Score: 52.8 bits (125), Expect = 2.1e-07
Identity = 25/78 (32.05%), Postives = 40/78 (51.28%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + +   +P    YNL+++ YG+ S        Y E+    C P   TY  L+ A+ + GL
Sbjct: 277 MKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGL 336

Query: 114 LEKAEAVFAEMRKYGLSP 132
            EKAE +F ++++ GL P
Sbjct: 337 CEKAEEIFEQLQEDGLEP 354

HSP 4 Score: 48.5 bits (114), Expect = 3.9e-06
Identity = 24/85 (28.24%), Postives = 41/85 (48.24%), Query Frame = 1


Query: 50  CEWI---LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLK 109
           CE I   ++++   PD  V N +++ YG+   +  +E    E+    C     TY +L+ 
Sbjct: 445 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 504

Query: 110 AYCKSGLLEKAEAVFAEMRKYGLSP 132
            Y K+G LE+ E +F E+++    P
Sbjct: 505 IYGKAGFLERIEELFVELKEKNFRP 529

[Close]

BLAST of MELO3C021744 vs. TAIR10
Match: AT3G59040.2 (AT3G59040.2 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 58.2 bits (139), Expect = 4.9e-09
Identity = 28/78 (35.90%), Postives = 46/78 (58.97%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + +S  +PDV+ Y LL+ AYG+    ++  S + E+L++   PT   Y +LL A+  SG+
Sbjct: 312 MQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGM 371

Query: 114 LEKAEAVFAEMRKYGLSP 132
           +E+A+ VF  MR+  + P
Sbjct: 372 VEQAKTVFKSMRRDRIFP 389

HSP 2 Score: 41.6 bits (96), Expect = 4.7e-04
Identity = 26/71 (36.62%), Postives = 36/71 (50.70%), Query Frame = 1


Query: 64  IVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAE 123
           + YN LM      + YK+V   Y ++  S   P   +YALL+KAY ++   E+A +VF E
Sbjct: 290 VTYNSLMSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEE 349

Query: 124 MRKYGLSPITK 135
           M   G+ P  K
Sbjct: 350 MLDAGVRPTHK 357

[Close]

BLAST of MELO3C021744 vs. TAIR10
Match: AT2G31400.1 (AT2G31400.1 genomes uncoupled 1)

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08
Identity = 24/70 (34.29%), Postives = 38/70 (54.29%), Query Frame = 1


Query: 60  RPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEA 119
           + DV+ YN L+  YG++  Y +V+  + E+   H +P   TY+ L+  Y K GL ++A  
Sbjct: 476 KKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME 535

Query: 120 VFAEMRKYGL 130
           +F E +  GL
Sbjct: 536 IFREFKSAGL 545

HSP 2 Score: 48.1 bits (113), Expect = 5.1e-06
Identity = 23/71 (32.39%), Postives = 38/71 (53.52%), Query Frame = 1


Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           P+++ Y+ L+D Y +  LYK+    + E   +        Y+ L+ A CK+GL+  A ++
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSL 571

Query: 121 FAEMRKYGLSP 132
             EM K G+SP
Sbjct: 572 IDEMTKEGISP 582

HSP 3 Score: 34.3 bits (77), Expect = 7.6e-02
Identity = 15/31 (48.39%), Postives = 21/31 (67.74%), Query Frame = 1


Query: 101 YALLLKAYCKSGLLEKAEAVFAEMRKYGLSP 132
           ++ L+ AY +SGL E+A +VF  M++YGL P
Sbjct: 271 FSALISAYGRSGLHEEAISVFNSMKEYGLRP 301

[Close]

BLAST of MELO3C021744 vs. TAIR10
Match: AT5G50280.1 (AT5G50280.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 55.1 bits (131), Expect = 4.1e-08
Identity = 32/124 (25.81%), Postives = 56/124 (45.16%), Query Frame = 1


Query: 13  LWDSLDTLPATNSTWD-DIISVAVQLRLNKKWGPIILICEWILNKSTFRPDVIVYNLLMD 72
           +W+  + +      W  D+    V+   ++      L+ +  + K   R + IVYN LMD
Sbjct: 328 VWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD 387

Query: 73  AYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAVFAEMRKYGLSP 132
           AY + +  ++VE  + E+ +    P+  TY +L+ AY +    +  E +  EM   GL P
Sbjct: 388 AYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEP 447

Query: 133 ITKT 136
             K+
Sbjct: 448 NVKS 451

HSP 2 Score: 45.8 bits (107), Expect = 2.5e-05
Identity = 27/76 (35.53%), Postives = 39/76 (51.32%), Query Frame = 1


Query: 61  PDVIVYNLLMDAYGQRSLYKDVES-TYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEA 120
           P+V  Y  L+ AYG+     D+ +  +L + +    P+  +Y  L+ AY  SG  EKA A
Sbjct: 447 PNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506

Query: 121 VFAEMRKYGLSPITKT 136
            F EM K G+ P  +T
Sbjct: 507 SFEEMCKEGIKPSVET 522

[Close]

BLAST of MELO3C021744 vs. TAIR10
Match: AT1G79540.1 (AT1G79540.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 53.9 bits (128), Expect = 9.2e-08
Identity = 26/75 (34.67%), Postives = 40/75 (53.33%), Query Frame = 1


Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           PD   YN ++ A   R L ++  S  LE+ E+   P   T+ +L+ + C++GL+ +AE +
Sbjct: 371 PDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEI 430

Query: 121 FAEMRKYGLSPITKT 136
           F E+ K G SP   T
Sbjct: 431 FTEIEKSGCSPSVAT 445

[Close]

BLAST of MELO3C021744 vs. NCBI nr
Match: gi|659118260|ref|XP_008459028.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g35130 isoform X1 [Cucumis melo])

HSP 1 Score: 270.0 bits (689), Expect = 2.3e-69
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR
Sbjct: 93  MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 152

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV
Sbjct: 153 PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 212

Query: 121 FAEMRKYGLSP 132
           FAEMRKYGLSP
Sbjct: 213 FAEMRKYGLSP 223

[Close]

BLAST of MELO3C021744 vs. NCBI nr
Match: gi|659118260|ref|XP_008459028.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g35130 isoform X1 [Cucumis melo])

HSP 1 Score: 56.2 bits (134), Expect = 5.3e-05
Identity = 25/83 (30.12%), Postives = 47/83 (56.63%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + ++ + PDV  YN LM++Y +          +  +    C P   +Y +++ AY ++GL
Sbjct: 321 MQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 380

Query: 114 LEKAEAVFAEMRKYGLSPITKTN 137
            E A+AVF EM++ G++P  K++
Sbjct: 381 HEDAQAVFEEMKRIGITPTMKSH 403

HSP 2 Score: 45.8 bits (107), Expect = 7.1e-02
Identity = 22/72 (30.56%), Postives = 37/72 (51.39%), Query Frame = 1


Query: 60  RPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEA 119
           +P    Y +L++ YG+ S      + + E+    C P   T+  L+ A  + GL EKAE 
Sbjct: 257 QPATDTYTMLINVYGKESKSHMAMNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEE 316

Query: 120 VFAEMRKYGLSP 132
           +F +M++ G  P
Sbjct: 317 IFEQMQEAGYEP 328

HSP 3 Score: 44.7 bits (104), Expect = 1.6e-01
Identity = 20/78 (25.64%), Postives = 40/78 (51.28%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           ++KS  +PD  V N +++ YG+   +  +E  +  + +  C     TY +L+  Y ++G 
Sbjct: 426 MHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGF 485

Query: 114 LEKAEAVFAEMRKYGLSP 132
           +E+ E +F  +    L P
Sbjct: 486 VERMEELFQLLPAKNLEP 503

HSP 4 Score: 270.0 bits (689), Expect = 2.3e-69
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR
Sbjct: 93  MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 152

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV
Sbjct: 153 PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 212

Query: 121 FAEMRKYGLSP 132
           FAEMRKYGLSP
Sbjct: 213 FAEMRKYGLSP 223

[Close]

BLAST of MELO3C021744 vs. NCBI nr
Match: gi|659118262|ref|XP_008459029.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g35130 isoform X2 [Cucumis melo])

HSP 1 Score: 46.6 bits (109), Expect = 4.2e-02
Identity = 27/83 (32.53%), Postives = 46/83 (55.42%), Query Frame = 1


Query: 60  RPDVIVYNLLMDAYGQRSLYKDVESTY----LELLESH--CIPTEDTYALLLKAYCKSGL 119
           +P    Y +L++ YG+ SL       Y    +  L  H  C P   +Y +++ AY ++GL
Sbjct: 257 QPATDTYTMLINVYGKVSLNSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 316

Query: 120 LEKAEAVFAEMRKYGLSPITKTN 137
            E A+AVF EM++ G++P  K++
Sbjct: 317 HEDAQAVFEEMKRIGITPTMKSH 339

HSP 2 Score: 44.7 bits (104), Expect = 1.6e-01
Identity = 20/78 (25.64%), Postives = 40/78 (51.28%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           ++KS  +PD  V N +++ YG+   +  +E  +  + +  C     TY +L+  Y ++G 
Sbjct: 362 MHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGF 421

Query: 114 LEKAEAVFAEMRKYGLSP 132
           +E+ E +F  +    L P
Sbjct: 422 VERMEELFQLLPAKNLEP 439

HSP 3 Score: 268.1 bits (684), Expect = 8.8e-69
Identity = 129/131 (98.47%), Postives = 131/131 (100.00%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           MEF+REEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWI+NKSTFR
Sbjct: 93  MEFVREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWIMNKSTFR 152

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV
Sbjct: 153 PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 212

Query: 121 FAEMRKYGLSP 132
           FAEMRKYGLSP
Sbjct: 213 FAEMRKYGLSP 223

[Close]

BLAST of MELO3C021744 vs. NCBI nr
Match: gi|449455399|ref|XP_004145440.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g35130 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 5.3e-05
Identity = 25/83 (30.12%), Postives = 47/83 (56.63%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + ++ + PDV  YN LM++Y +          +  +    C P   +Y +++ AY ++GL
Sbjct: 321 MQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 380

Query: 114 LEKAEAVFAEMRKYGLSPITKTN 137
            E A+AVF EM++ G++P  K++
Sbjct: 381 HEDAQAVFEEMKRIGITPTMKSH 403

HSP 2 Score: 47.8 bits (112), Expect = 1.9e-02
Identity = 22/72 (30.56%), Postives = 38/72 (52.78%), Query Frame = 1


Query: 60  RPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEA 119
           +P    Y +L++ YG+ S     ++ + E+    C P   T+  L+ A  + GL EKAE 
Sbjct: 257 QPTTDTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEE 316

Query: 120 VFAEMRKYGLSP 132
           +F +M++ G  P
Sbjct: 317 IFEQMQEAGYEP 328

HSP 3 Score: 44.7 bits (104), Expect = 1.6e-01
Identity = 20/78 (25.64%), Postives = 40/78 (51.28%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           ++KS  +PD  V N +++ YG+   +  +E  +  + +  C     TY +L+  Y ++G 
Sbjct: 426 MHKSGLKPDTFVMNSMLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGF 485

Query: 114 LEKAEAVFAEMRKYGLSP 132
           +E+ E +F  +    L P
Sbjct: 486 VERMEELFQLLPAKNLEP 503

HSP 4 Score: 40.0 bits (92), Expect = 3.9e+00
Identity = 22/78 (28.21%), Postives = 31/78 (39.74%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + K    P  IVYN  +D   +          +  +    C PT DTY +L+  Y K   
Sbjct: 216 MRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYGKESK 275

Query: 114 LEKAEAVFAEMRKYGLSP 132
              A+ +F EMR     P
Sbjct: 276 SHMAQNIFDEMRTQRCKP 293

HSP 5 Score: 212.2 bits (539), Expect = 5.7e-52
Identity = 98/139 (70.50%), Postives = 119/139 (85.61%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           ++F+++EVD   +W+ LDTLPA+++ WDDII+VAVQLRLNK+WG IILICEWIL KS+F+
Sbjct: 113 LDFVQKEVDQNSIWEILDTLPASHTIWDDIINVAVQLRLNKQWGSIILICEWILYKSSFK 172

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           PDVI YNLL+DAYGQ+S +KD ESTYLELLE+ C+PTEDTYALLLKAYCKSGL +KAEA+
Sbjct: 173 PDVICYNLLIDAYGQKSQHKDAESTYLELLEARCVPTEDTYALLLKAYCKSGLFDKAEAI 232

Query: 121 FAEMRKYGLSPITKTNDEY 140
           F EMRKYGL P     D Y
Sbjct: 233 FVEMRKYGLPPSAIVLDAY 251

[Close]

BLAST of MELO3C021744 vs. NCBI nr
Match: gi|694326088|ref|XP_009353967.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g35130 isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 56.2 bits (134), Expect = 5.3e-05
Identity = 25/83 (30.12%), Postives = 46/83 (55.42%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + ++ + PDV  YN LM+AY +          +  +    C P   +Y +++ AY ++GL
Sbjct: 341 MQEAGYEPDVYAYNALMEAYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 400

Query: 114 LEKAEAVFAEMRKYGLSPITKTN 137
            E A+A F EM++ G++P  K++
Sbjct: 401 HEDAQAAFEEMKRLGITPTVKSH 423

HSP 2 Score: 47.0 bits (110), Expect = 3.2e-02
Identity = 22/78 (28.21%), Postives = 38/78 (48.72%), Query Frame = 1


Query: 54  LNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGL 113
           + +   +P    Y +L++ YG+          + E+    C P   TY  L+ A+ + GL
Sbjct: 271 MKRDQCQPSTETYTMLINLYGRERKSFMALKLFQEMKSQKCRPNICTYTALVNAFARDGL 330

Query: 114 LEKAEAVFAEMRKYGLSP 132
            EKAE +F +M++ G  P
Sbjct: 331 CEKAEEIFEQMQEAGYEP 348

HSP 3 Score: 212.2 bits (539), Expect = 5.7e-52
Identity = 98/139 (70.50%), Postives = 119/139 (85.61%), Query Frame = 1


Query: 1   MEFLREEVDYMGLWDSLDTLPATNSTWDDIISVAVQLRLNKKWGPIILICEWILNKSTFR 60
           ++F+++EVD   +W+ LDTLPA+++ WDDII+VAVQLRLNK+WG IILICEWIL KS+F+
Sbjct: 123 LDFVQKEVDQNSIWEILDTLPASHTIWDDIINVAVQLRLNKQWGSIILICEWILYKSSFK 182

Query: 61  PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 120
           PDVI YNLL+DAYGQ+S +KD ESTYLELLE+ C+PTEDTYALLLKAYCKSGL +KAEA+
Sbjct: 183 PDVICYNLLIDAYGQKSQHKDAESTYLELLEARCVPTEDTYALLLKAYCKSGLFDKAEAI 242

Query: 121 FAEMRKYGLSPITKTNDEY 140
           F EMRKYGL P     D Y
Sbjct: 243 FVEMRKYGLPPSAIVLDAY 261

The following BLAST results are available for this feature:

BLAST of MELO3C021744 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PP186_ARATH	9.2e-42	58.65	Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana GN...	[more]
PP287_ARATH	8.7e-08	35.90	Pentatricopeptide repeat-containing protein At3g59040 OS=Arabidopsis thaliana GN...	[more]
PP178_ARATH	1.9e-07	34.29	Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop...	[more]
PP426_ARATH	7.4e-07	25.81	Pentatricopeptide repeat-containing protein At5g50280, chloroplastic OS=Arabidop...	[more]
PP133_ARATH	1.6e-06	34.67	Pentatricopeptide repeat-containing protein At1g79540 OS=Arabidopsis thaliana GN...	[more]

BLAST of MELO3C021744 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M168_CUCSA	6.2e-69	98.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701920 PE=4 SV=1	[more]
A0A0A0M168_CUCSA	3.7e-05	30.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G701920 PE=4 SV=1	[more]
M5WHJ6_PRUPE	1.4e-04	30.12	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004057mg PE=4 SV=1	[more]
A0A0B0MYE2_GOSAR	1.2e-03	29.17	Uncharacterized protein OS=Gossypium arboreum GN=F383_09329 PE=4 SV=1	[more]
A0A061GEK3_THECC	4.8e-05	31.33	Tetratricopeptide repeat-like superfamily protein OS=Theobroma cacao GN=TCM_0294...	[more]

BLAST of MELO3C021744 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35130.2	5.2e-43	58.65	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G59040.2	4.9e-09	35.90	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G31400.1	1.1e-08	34.29	genomes uncoupled 1	[more]
AT5G50280.1	4.1e-08	25.81	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G79540.1	9.2e-08	34.67	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of MELO3C021744 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118260\|ref\|XP_008459028.1\|	2.3e-69	100.00	PREDICTED: pentatricopeptide repeat-containing protein At2g35130 isoform X1 [Cuc...	[more]
gi\|659118260\|ref\|XP_008459028.1\|	5.3e-05	30.12	PREDICTED: pentatricopeptide repeat-containing protein At2g35130 isoform X1 [Cuc...	[more]
gi\|659118262\|ref\|XP_008459029.1\|	4.2e-02	32.53	PREDICTED: pentatricopeptide repeat-containing protein At2g35130 isoform X2 [Cuc...	[more]
gi\|449455399\|ref\|XP_004145440.1\|	5.3e-05	30.12	PREDICTED: pentatricopeptide repeat-containing protein At2g35130 [Cucumis sativu...	[more]
gi\|694326088\|ref\|XP_009353967.1\|	5.3e-05	30.12	PREDICTED: pentatricopeptide repeat-containing protein At2g35130 isoform X2 [Pyr...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005839	proteasome core complex
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004298	threonine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021744T1	MELO3C021744T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 61..110 score: 2.
IPR002885	Pentatricopeptide repeat	TIGRFAMs	TIGR00756	TIGR00756	coord: 100..131 score: 2.4E-9coord: 64..98 score: 9.
IPR002885	Pentatricopeptide repeat	PROFILE	PS51375	PPR	coord: 97..131 score: 13.11coord: 62..96 score: 9
None	No IPR available	PANTHER	PTHR24015	FAMILY NOT NAMED	coord: 14..131 score: 8.3
None	No IPR available	PANTHER	PTHR24015:SF421	SUBFAMILY NOT NAMED	coord: 14..131 score: 8.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C021744	Csa1G701920	Cucumber (Chinese Long) v2	cumeB017
MELO3C021744	Cla004611	Watermelon (97103) v1	mewmB156
MELO3C021744	ClCG01G009530	Watermelon (Charleston Gray)	mewcgB140
MELO3C021744	Cla97C01G009750	Watermelon (97103) v2	mewmbB141
MELO3C021744	Bhi08G000721	Wax gourd	mewgoB164
MELO3C021744	CSPI01G34400	Wild cucumber (PI 183967)	cpimeB013
MELO3C021744	Cucsa.003830	Cucumber (Gy14) v1	cgymeB033
MELO3C021744	Lsi02G010540	Bottle gourd (USVL1VR-Ls)	lsimeB180
MELO3C021744	CsGy1G032870	Cucumber (Gy14) v2	cgybmeB012
MELO3C021744	CsaV3_1G046260	Cucumber (Chinese Long) v3	cucmeB012

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021744	Cucurbita pepo (Zucchini)	cpemeB027
MELO3C021744	Cucurbita pepo (Zucchini)	cpemeB477
MELO3C021744	Silver-seed gourd	carmeB0119
MELO3C021744	Cucurbita maxima (Rimu)	cmameB192
MELO3C021744	Cucurbita maxima (Rimu)	cmameB364
MELO3C021744	Cucurbita moschata (Rifu)	cmomeB179
MELO3C021744	Cucurbita moschata (Rifu)	cmomeB357