MELO3C021740 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021740
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionEH domain-binding protein 1-like protein 1
Locationchr12 : 16401335 .. 16401901 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACTGGAAATCTGTAAAGAAGATAAAAGACAAAGGACGTTATGAAGGATACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGGAAGGTAGTTGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATCGACTGTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACACGTCAATGGATGGACCATGCGACTTATTTGCAGAAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATCAAGATAAGTTAGAAAAAAATCTTGAGAAGTTAGATAAGGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGAAAGGAATATTTTCTCGAGCTTGTCAATGATTTGGATACATCAATTGAAAAACGAGAAACACAAATAATGGATTTGGAAGCACAAAACATTCTTTGCATCAAACTATTGATAGCCTACATTTGA

mRNA sequence

ATGCACTGGAAATCTGTAAAGAAGATAAAAGACAAAGGACGTTATGAAGGATACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGGAAGGTAGTTGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATCGACTGTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACACGTCAATGGATGGACCATGCGACTTATTTGCAGAAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATCAAGATAAGTTAGAAAAAAATCTTGAGAAGTTAGATAAGGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGAAAGGAATATTTTCTCGAGCTTGTCAATGATTTGGATACATCAATTGAAAAACGAGAAACACAAATAATGGATTTGGAAGCACAAAACATTCTTTGCATCAAACTATTGATAGCCTACATTTGA

Coding sequence (CDS)

ATGCACTGGAAATCTGTAAAGAAGATAAAAGACAAAGGACGTTATGAAGGATACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGGAAGGTAGTTGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATCGACTGTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACACGTCAATGGATGGACCATGCGACTTATTTGCAGAAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATCAAGATAAGTTAGAAAAAAATCTTGAGAAGTTAGATAAGGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGAAAGGAATATTTTCTCGAGCTTGTCAATGATTTGGATACATCAATTGAAAAACGAGAAACACAAATAATGGATTTGGAAGCACAAAACATTCTTTGCATCAAACTATTGATAGCCTACATTTGA

Protein sequence

MHWKSVKKIKDKGRYEGYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQNILCIKLLIAYI*
Homology
[Close]
BLAST of MELO3C021740 vs. Swiss-Prot
Match: TPM1_YEAST (Tropomyosin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPM1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-06
Identity = 31/129 (24.03%), Postives = 64/129 (49.61%), Query Frame = 1 

Query: 47  QPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKN 106
           +   W EK  EL+EKN+ LEQEN +   + +        L+ E+EK ++ L +  + E++
Sbjct: 14  EAESWQEKYEELKEKNKDLEQENVEKENQIKSLTVKNQQLEDEIEKLEAGLSDSKQTEQD 73

Query: 107 LEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKD---LESGKEYFLELVNDLDTSI 166
             + + +++ +   N  L+ E   L+A +    +  +D   L+S  + F +    L+  +
Sbjct: 74  NVEKENQIKSLTVKNHQLEEEIEKLEAELAESKQLSEDSHHLQSNNDNFSKKNQQLEEDL 133

Query: 167 EKRETQIMD 173
           E+ +T++ +
Sbjct: 134 EESDTKLKE 142

[Close]
BLAST of MELO3C021740 vs. TrEMBL
Match: A0A0A0LWU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G328390 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.0e-07
Identity = 31/107 (28.97%), Postives = 64/107 (59.81%), Query Frame = 1 

Query: 62  NRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKAN 121
           + +L  ENE LRKE ++W+  AT  +++LE+ +  L+ Q +LEK++  L+ E  ++ K N
Sbjct: 2   SHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKN 61

Query: 122 RSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRET 169
           + L  +  T+ +   +Q   I++L+   E   ++V D  ++++++ T
Sbjct: 62  KRLLRDIATMHSEAEAQKVCIRELKQELERVSKVVIDFQSALDEQAT 108

[Close]
BLAST of MELO3C021740 vs. TrEMBL
Match: A2DDP2_TRIVA (Viral A-type inclusion protein, putative OS=Trichomonas vaginalis GN=TVAG_198570 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.4e-06
Identity = 36/147 (24.49%), Postives = 70/147 (47.62%), Query Frame = 1 

Query: 30  IVISRKVVERGKETSFEQPNQWIEKSI-----------ELEEKNRLLEQENEKLRKETRQ 89
           I++ ++ ++  K  S +Q N+ +++ I           +L+++N  L+QENEKL++E  +
Sbjct: 785 IIMLQQEIDENKSNSLKQENEKLQEQIEELQKHSPSPKKLQQENNSLKQENEKLQEEIEE 844

Query: 90  WMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQ 149
             +    LQ E    +S     DKL+  +E+L   + ++ + N  LKN K     +    
Sbjct: 845 LQNTVDKLQNE-NNLQSLQEENDKLQDEIEELQSTVEKLQQENEELKNNKPIYSPSPKKL 904

Query: 150 DEYIKDLESGKEYFLELVNDLDTSIEK 166
                 L+   E   E + +L  +I+K
Sbjct: 905 QNENNSLKQENEKLQEQIEELQNTIDK 930

[Close]
BLAST of MELO3C021740 vs. TrEMBL
Match: A2DDP2_TRIVA (Viral A-type inclusion protein, putative OS=Trichomonas vaginalis GN=TVAG_198570 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-04
Identity = 43/178 (24.16%), Postives = 76/178 (42.70%), Query Frame = 1 

Query: 24   NRRKNIIVISRKVVERGKETSFEQPNQWIEKSIE------------------LEEKNRLL 83
            N +  +   S K ++   E S +Q N+ +++ IE                  L+++N  L
Sbjct: 1568 NNKSKLYSPSPKKLQNENE-SLKQENEKLQEQIEKLQQENDSKPKYSPSPRKLQQENNSL 1627

Query: 84   EQENEKLRKETRQWMDHATYLQKELEKTKSFL--------------RNQDKLEKNLEKLD 143
            +QENEKL++E  Q  +    LQ+E  K+KS L                 DKL+  +E+L 
Sbjct: 1628 KQENEKLQEEIDQLQNTIEKLQQENNKSKSLLNTPNKLQNEYETLQEENDKLQDKIEELQ 1687

Query: 144  KEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQ 170
              + ++ + N  LKN K     +          L+   E   E + +L  +I+K + +
Sbjct: 1688 STIEKLQQENEELKNNKPIYSPSPKKLQNENNSLKQENEKLQEEIEELQNTIDKLQIE 1744


HSP 2 Score: 54.3 bits (129), Expect = 1.9e-04
Identity = 43/174 (24.71%), Postives = 74/174 (42.53%), Query Frame = 1 

Query: 24   NRRKNIIVISRKVVERGKETSFEQPNQWIEKSIE------------------LEEKNRLL 83
            N +  +   S K ++   E S +Q N+ +++ IE                  L+++N  L
Sbjct: 1173 NNKSKLYSPSPKKLQNENE-SLKQENEKLQEQIEKLQQENDSKPKYSPSPRKLQQENNSL 1232

Query: 84   EQENEKLRKETRQWMDHATYLQKELEKTKSFL--------------RNQDKLEKNLEKLD 143
            +QENEKL++E  Q  +    LQ+E  K+KS L                 DKL+  +E+L 
Sbjct: 1233 KQENEKLQEEIDQLQNTIEKLQQENNKSKSLLNTPNKLQNEYETLQEENDKLQDEIEELQ 1292

Query: 144  KEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEK 166
              + ++ + N  LKN K     +          L+   E   E + +L  +I+K
Sbjct: 1293 STVEKLQQENEELKNNKPIYSPSPKKLQNENNSLKQENEKLQEEIEELQNTIDK 1345


HSP 3 Score: 52.8 bits (125), Expect = 5.4e-04
Identity = 30/113 (26.55%), Postives = 55/113 (48.67%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRR 116
            +L+++N  L+QENEKL++E  +  +    LQ E    +S     DKL+  +E+L   + +
Sbjct: 1782 KLQQENNSLKQENEKLQEEIDELQNTVDKLQNE-NNLQSLQEENDKLQDEIEELQSTVEK 1841

Query: 117  MNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQ 170
            + + N  LKN K     +          L+   E   E + +L  +I+K + +
Sbjct: 1842 LQQENEELKNNKPIYSPSPKKLQNENNSLKQENEKLQEEIEELQNTIDKLQIE 1893


HSP 4 Score: 52.8 bits (125), Expect = 5.4e-04
Identity = 30/113 (26.55%), Postives = 55/113 (48.67%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRR 116
            +L+++N  L+QENEKL++E  +  +    LQ E    +S     DKL+  +E+L   + +
Sbjct: 1931 KLQQENNSLKQENEKLQEEIDELQNTVDKLQNE-NNLQSLQEENDKLQDEIEELQSTVEK 1990

Query: 117  MNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQ 170
            + + N  LKN K     +          L+   E   E + +L  +I+K + +
Sbjct: 1991 LQQENEELKNNKPIYSPSPKKLQNENNSLKQENEKLQEEIEELQNTIDKLQIE 2042


HSP 5 Score: 47.4 bits (111), Expect = 2.3e-02
Identity = 29/110 (26.36%), Postives = 59/110 (53.64%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELE-KTKSFLRNQDKLEKNLEKLDKEMR 116
            +L+++N  L+QE E L++E  Q     +Y   +L+ + +S  +  +KL++ +E+L   + 
Sbjct: 1355 KLQQENNSLKQEIENLKEEIEQNNKSKSYSPNKLQNENESLKQENEKLQEEIEELQNTVE 1414

Query: 117  RMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEK 166
            ++ + N  LKN K+   +    Q+E    L+   E   E + +L  +I+K
Sbjct: 1415 KLQQENDLLKNNKSVSPSPKKLQNEN-NSLKQENEKLQEEIEELQNTIDK 1463


HSP 6 Score: 46.6 bits (109), Expect = 3.9e-02
Identity = 37/163 (22.70%), Postives = 72/163 (44.17%), Query Frame = 1 

Query: 5    SVKKIKDKGRYEGYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRL 64
            ++ K+++  +       + N  K  I   ++ +E+  ++    PN       +L+ +N  
Sbjct: 1342 TIDKLQNSNKSPNKLQQENNSLKQEIENLKEEIEQNNKSKSYSPN-------KLQNENES 1401

Query: 65   LEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSL 124
            L+QENEKL++E  +  +    LQ+E       L+N   +  + +KL  E   + + N  L
Sbjct: 1402 LKQENEKLQEEIEELQNTVEKLQQE----NDLLKNNKSVSPSPKKLQNENNSLKQENEKL 1461

Query: 125  KNEKTTLQATVG---SQDEYIKDLESGKEYFLELVNDLDTSIE 165
            + E   LQ T+    + ++  K L+   +  L   N L    E
Sbjct: 1462 QEEIEELQNTIDKLQNSNKSPKKLQQENKSMLNSPNKLQNEYE 1493


HSP 7 Score: 45.8 bits (107), Expect = 6.7e-02
Identity = 33/122 (27.05%), Postives = 54/122 (44.26%), Query Frame = 1 

Query: 58   LEEKNRLLEQENEKLRKETRQWMDHATYLQKELEK------------TKSFLRNQDKLEK 117
            L+++N  L+QENEKL++E  Q  +    LQ    K             +S  +  +KL++
Sbjct: 1143 LQQENNSLKQENEKLQEEINQLQNTIEKLQNNKSKLYSPSPKKLQNENESLKQENEKLQE 1202

Query: 118  NLEKLDKE----------MRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLEL 158
             +EKL +E           R++ + N SLK E   LQ  +      I+ L+        L
Sbjct: 1203 QIEKLQQENDSKPKYSPSPRKLQQENNSLKQENEKLQEEIDQLQNTIEKLQQENNKSKSL 1262


HSP 8 Score: 45.8 bits (107), Expect = 6.7e-02
Identity = 33/122 (27.05%), Postives = 54/122 (44.26%), Query Frame = 1 

Query: 58   LEEKNRLLEQENEKLRKETRQWMDHATYLQKELEK------------TKSFLRNQDKLEK 117
            L+++N  L+QENEKL++E  Q  +    LQ    K             +S  +  +KL++
Sbjct: 1538 LQQENNSLKQENEKLQEEINQLQNTIEKLQNNKSKLYSPSPKKLQNENESLKQENEKLQE 1597

Query: 118  NLEKLDKE----------MRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLEL 158
             +EKL +E           R++ + N SLK E   LQ  +      I+ L+        L
Sbjct: 1598 QIEKLQQENDSKPKYSPSPRKLQQENNSLKQENEKLQEEIDQLQNTIEKLQQENNKSKSL 1657


HSP 9 Score: 43.9 bits (102), Expect = 2.5e-01
Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRR 116
            +L+ +N  L+QENEKL++E            +EL+ T   L+N +K  K   KL +E + 
Sbjct: 1040 KLQNENNSLKQENEKLQEEI-----------EELQNTIDKLQNSNKSPK---KLQQENKS 1099

Query: 117  MNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDL 160
            M  +   L+NE  TLQ       + I++L+S  E  L+  NDL
Sbjct: 1100 MLNSPNKLQNEYETLQEENEKLQDEIEELQSTVEK-LQQENDL 1127


HSP 10 Score: 43.9 bits (102), Expect = 2.5e-01
Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRR 116
            +L+ +N  L+QENEKL++E            +EL+ T   L+N +K  K   KL +E + 
Sbjct: 1435 KLQNENNSLKQENEKLQEEI-----------EELQNTIDKLQNSNKSPK---KLQQENKS 1494

Query: 117  MNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDL 160
            M  +   L+NE  TLQ       + I++L+S  E  L+  NDL
Sbjct: 1495 MLNSPNKLQNEYETLQEENEKLQDEIEELQSTVEK-LQQENDL 1522


HSP 11 Score: 43.9 bits (102), Expect = 2.5e-01
Identity = 33/135 (24.44%), Postives = 68/135 (50.37%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQ--------DKLEKNLE 116
            +L+++N  L+QE E L++E  Q     +Y  K+L++  + L+ +        D+L+  ++
Sbjct: 1750 KLQQENNSLKQEIENLKEEIEQNNKSKSYSPKKLQQENNSLKQENEKLQEEIDELQNTVD 1809

Query: 117  KLDKE--MRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELV-------NDL 175
            KL  E  ++ + + N  L++E   LQ+TV    +  ++L++ K  +           N L
Sbjct: 1810 KLQNENNLQSLQEENDKLQDEIEELQSTVEKLQQENEELKNNKPIYSPSPKKLQNENNSL 1869


HSP 12 Score: 43.9 bits (102), Expect = 2.5e-01
Identity = 33/135 (24.44%), Postives = 68/135 (50.37%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQ--------DKLEKNLE 116
            +L+++N  L+QE E L++E  Q     +Y  K+L++  + L+ +        D+L+  ++
Sbjct: 1899 KLQQENNSLKQEIENLKEEIEQNNKSKSYSPKKLQQENNSLKQENEKLQEEIDELQNTVD 1958

Query: 117  KLDKE--MRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELV-------NDL 175
            KL  E  ++ + + N  L++E   LQ+TV    +  ++L++ K  +           N L
Sbjct: 1959 KLQNENNLQSLQEENDKLQDEIEELQSTVEKLQQENEELKNNKPIYSPSPKKLQNENNSL 2018


HSP 13 Score: 42.4 bits (98), Expect = 7.4e-01
Identity = 30/124 (24.19%), Postives = 67/124 (54.03%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELE-KTKSFLRNQDKLEKNLEKLDKEMR 116
            +L+++N  L+QE E L++E  Q     +Y   +L+ + +S  +  +KL++ +E+L   + 
Sbjct: 940  KLQQENNSLKQEIENLKEEIEQNNKSKSYSPNKLQNENESLKQENEKLQEQIEELQNTVE 999

Query: 117  RMNKANRSLKNEKTTLQA--TVGSQDEYIKDLESGKEYFLELVND---LDTSIEKRETQI 175
            ++ + N  LKN K+   +   +  +++ +K+ +S      +L N+   L    EK + +I
Sbjct: 1000 KLQQENDLLKNNKSVSPSPKKLQQENDLLKNNKSVSPSPKKLQNENNSLKQENEKLQEEI 1059

[Close]
BLAST of MELO3C021740 vs. NCBI nr
Match: gi|659131250|ref|XP_008465588.1| (PREDICTED: polyamine-modulated factor 1-binding protein 1-like [Cucumis melo])

HSP 1 Score: 305.4 bits (781), Expect = 6.7e-80
Identity = 155/179 (86.59%), Postives = 165/179 (92.18%), Query Frame = 1 

Query: 3   WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIEL 62
           WKS++KIKDKG YEG    YE WQANRR NII ISR+VVERGKETSFEQPNQ IEKSI+L
Sbjct: 61  WKSIRKIKDKGHYEGVTSEYETWQANRRNNIIDISREVVERGKETSFEQPNQRIEKSIKL 120

Query: 63  EEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMN 122
           +EKNRLLEQENEKLRKET QWMDHATYLQ ELEKTKSFL+NQDKLEK+LE  DKEMRRMN
Sbjct: 121 KEKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETSDKEMRRMN 180

Query: 123 KANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN 178
           KANRSLKNEKTTLQATVGS+DEYIKDLE+GKEYFLELVNDL+TSI KRETQIMDLEAQN
Sbjct: 181 KANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQN 239

[Close]
BLAST of MELO3C021740 vs. NCBI nr
Match: gi|659134033|ref|XP_008467001.1| (PREDICTED: tropomyosin-1-like, partial [Cucumis melo])

HSP 1 Score: 266.2 bits (679), Expect = 4.5e-68
Identity = 133/150 (88.67%), Postives = 144/150 (96.00%), Query Frame = 1 

Query: 28  NIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQ 87
           +II ISR+VVERGKETSFEQPN+WIEKSIELEEKNRLLEQENEKLRKET QWMDHATYLQ
Sbjct: 6   DIIDISREVVERGKETSFEQPNRWIEKSIELEEKNRLLEQENEKLRKETSQWMDHATYLQ 65

Query: 88  KELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLES 147
            +LEKTKSFL+NQDKLEK+LE LDKEMRRMNKANRSLKNEKTT QAT+GSQDEYIKDLE+
Sbjct: 66  NKLEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTTFQATMGSQDEYIKDLEN 125

Query: 148 GKEYFLELVNDLDTSIEKRETQIMDLEAQN 178
           GKEYFL+LVNDL+TSI KRET+IMDLEAQN
Sbjct: 126 GKEYFLKLVNDLNTSIRKRETKIMDLEAQN 155

[Close]
BLAST of MELO3C021740 vs. NCBI nr
Match: gi|659125951|ref|XP_008462935.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103501197 [Cucumis melo])

HSP 1 Score: 80.5 bits (197), Expect = 3.5e-12
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 1 

Query: 135 VGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN 178
           +GSQDEYIKDLE+GKEYFLELVNDL+TSI KRETQIMDLEAQN
Sbjct: 1   MGSQDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQN 43

[Close]
BLAST of MELO3C021740 vs. NCBI nr
Match: gi|700210231|gb|KGN65327.1| (hypothetical protein Csa_1G328390 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-07
Identity = 31/107 (28.97%), Postives = 64/107 (59.81%), Query Frame = 1 

Query: 62  NRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKAN 121
           + +L  ENE LRKE ++W+  AT  +++LE+ +  L+ Q +LEK++  L+ E  ++ K N
Sbjct: 2   SHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKN 61

Query: 122 RSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRET 169
           + L  +  T+ +   +Q   I++L+   E   ++V D  ++++++ T
Sbjct: 62  KRLLRDIATMHSEAEAQKVCIRELKQELERVSKVVIDFQSALDEQAT 108

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BLAST of MELO3C021740 vs. NCBI nr
Match: gi|543734565|ref|XP_005508277.1| (PREDICTED: calcium-binding and coiled-coil domain-containing protein 2 [Columba livia])

HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06
Identity = 33/120 (27.50%), Postives = 63/120 (52.50%), Query Frame = 1 

Query: 57  ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRR 116
           ELE +N+ L +ENE+L+            LQ+EL+KT+    N + L  N+EKL+ E+  
Sbjct: 148 ELELQNKNLHEENEELKASCASLQQQNINLQEELKKTQELQNNVESLRSNIEKLELELNS 207

Query: 117 MNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQ 176
           + K N+ LK +     A +    E I+++ S K+     +      +++ ++Q+++ E +
Sbjct: 208 LRKENKHLKEQDDCRGAELLQLKEQIQNVSSDKDRLASRLRAALEHMDQLQSQVLNYEKE 267

The following BLAST results are available for this feature:
BLAST of MELO3C021740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TPM1_YEAST3.7e-0624.03Tropomyosin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPM1 P... [more]
BLAST of MELO3C021740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWU7_CUCSA4.0e-0728.97Uncharacterized protein OS=Cucumis sativus GN=Csa_1G328390 PE=4 SV=1[more]
A2DDP2_TRIVA3.4e-0624.49Viral A-type inclusion protein, putative OS=Trichomonas vaginalis GN=TVAG_198570... [more]
A2DDP2_TRIVA1.4e-0424.16Viral A-type inclusion protein, putative OS=Trichomonas vaginalis GN=TVAG_198570... [more]
BLAST of MELO3C021740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131250|ref|XP_008465588.1|6.7e-8086.59PREDICTED: polyamine-modulated factor 1-binding protein 1-like [Cucumis melo][more]
gi|659134033|ref|XP_008467001.1|4.5e-6888.67PREDICTED: tropomyosin-1-like, partial [Cucumis melo][more]
gi|659125951|ref|XP_008462935.1|3.5e-1290.70PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103501197 [Cucumis me... [more]
gi|700210231|gb|KGN65327.1|5.8e-0728.97hypothetical protein Csa_1G328390 [Cucumis sativus][more]
gi|543734565|ref|XP_005508277.1|2.9e-0627.50PREDICTED: calcium-binding and coiled-coil domain-containing protein 2 [Columba ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021740T1MELO3C021740T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 93..134
score: -coord: 55..82
score: -coord: 156..176
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021740Cucumber (Chinese Long) v3cucmeB012
MELO3C021740Watermelon (97103) v2mewmbB141
MELO3C021740Wax gourdmewgoB164
MELO3C021740Cucumber (Gy14) v1cgymeB543
MELO3C021740Cucurbita maxima (Rimu)cmameB192
MELO3C021740Cucurbita maxima (Rimu)cmameB364
MELO3C021740Cucurbita moschata (Rifu)cmomeB179
MELO3C021740Cucurbita moschata (Rifu)cmomeB357
MELO3C021740Wild cucumber (PI 183967)cpimeB013
MELO3C021740Cucumber (Chinese Long) v2cumeB017
MELO3C021740Watermelon (Charleston Gray)mewcgB140
MELO3C021740Watermelon (97103) v1mewmB156
MELO3C021740Cucurbita pepo (Zucchini)cpemeB027
MELO3C021740Cucurbita pepo (Zucchini)cpemeB477
MELO3C021740Bottle gourd (USVL1VR-Ls)lsimeB180
MELO3C021740Cucumber (Gy14) v2cgybmeB012
MELO3C021740Silver-seed gourdcarmeB0119