MELO3C021740 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021740
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionEH domain-binding protein 1-like protein 1
Locationchr12 : 16401335 .. 16401901 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACTGGAAATCTGTAAAGAAGATAAAAGACAAAGGACGTTATGAAGGATACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGGAAGGTAGTTGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATCGACTGTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACACGTCAATGGATGGACCATGCGACTTATTTGCAGAAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATCAAGATAAGTTAGAAAAAAATCTTGAGAAGTTAGATAAGGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGAAAGGAATATTTTCTCGAGCTTGTCAATGATTTGGATACATCAATTGAAAAACGAGAAACACAAATAATGGATTTGGAAGCACAAAACATTCTTTGCATCAAACTATTGATAGCCTACATTTGA

mRNA sequence

ATGCACTGGAAATCTGTAAAGAAGATAAAAGACAAAGGACGTTATGAAGGATACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGGAAGGTAGTTGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATCGACTGTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACACGTCAATGGATGGACCATGCGACTTATTTGCAGAAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATCAAGATAAGTTAGAAAAAAATCTTGAGAAGTTAGATAAGGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGAAAGGAATATTTTCTCGAGCTTGTCAATGATTTGGATACATCAATTGAAAAACGAGAAACACAAATAATGGATTTGGAAGCACAAAACATTCTTTGCATCAAACTATTGATAGCCTACATTTGA

Coding sequence (CDS)

ATGCACTGGAAATCTGTAAAGAAGATAAAAGACAAAGGACGTTATGAAGGATACGAGGCATGGCAGGCAAACAGAAGGAAGAATATAATAGTTATCTCAAGGAAGGTAGTTGAAAGGGGAAAAGAGACAAGCTTCGAACAACCAAATCAGTGGATTGAGAAGAGCATAGAACTAGAAGAGAAAAATCGACTGTTAGAGCAAGAGAACGAGAAACTTCGTAAAGAGACACGTCAATGGATGGACCATGCGACTTATTTGCAGAAAGAACTCGAAAAGACCAAGAGTTTCTTAAGAAATCAAGATAAGTTAGAAAAAAATCTTGAGAAGTTAGATAAGGAGATGAGGCGAATGAATAAAGCAAATAGAAGTTTGAAAAATGAAAAGACAACATTACAAGCAACAGTGGGGTCGCAAGATGAATATATTAAAGATTTAGAAAGTGGAAAGGAATATTTTCTCGAGCTTGTCAATGATTTGGATACATCAATTGAAAAACGAGAAACACAAATAATGGATTTGGAAGCACAAAACATTCTTTGCATCAAACTATTGATAGCCTACATTTGA

Protein sequence

MHWKSVKKIKDKGRYEGYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQNILCIKLLIAYI*
Homology
[Close]
BLAST of MELO3C021740 vs. Swiss-Prot
Match: TPM1_YEAST (Tropomyosin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPM1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.7e-06
Identity = 31/129 (24.03%), Postives = 64/129 (49.61%), Query Frame = 1 

Query: 47  QPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKN 106
           +   W EK  EL+EKN+ LEQEN +   + +        L+ E+EK ++ L +  + E++
Sbjct: 14  EAESWQEKYEELKEKNKDLEQENVEKENQIKSLTVKNQQLEDEIEKLEAGLSDSKQTEQD 73

Query: 107 LEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKD---LESGKEYFLELVNDLDTSI 166
             + + +++ +   N  L+ E   L+A +    +  +D   L+S  + F +    L+  +
Sbjct: 74  NVEKENQIKSLTVKNHQLEEEIEKLEAELAESKQLSEDSHHLQSNNDNFSKKNQQLEEDL 133

Query: 167 EKRETQIMD 173
           E+ +T++ +
Sbjct: 134 EESDTKLKE 142

[Close]
BLAST of MELO3C021740 vs. TrEMBL
Match: A0A0A0LWU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G328390 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 4.0e-07
Identity = 31/107 (28.97%), Postives = 64/107 (59.81%), Query Frame = 1 

Query: 62  NRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKAN 121
           + +L  ENE LRKE ++W+  AT  +++LE+ +  L+ Q +LEK++  L+ E  ++ K N
Sbjct: 2   SHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKN 61

Query: 122 RSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRET 169
           + L  +  T+ +   +Q   I++L+   E   ++V D  ++++++ T
Sbjct: 62  KRLLRDIATMHSEAEAQKVCIRELKQELERVSKVVIDFQSALDEQAT 108

[Close]
BLAST of MELO3C021740 vs. TrEMBL
Match: A2DDP2_TRIVA (Viral A-type inclusion protein, putative OS=Trichomonas vaginalis GN=TVAG_198570 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.4e-06
Identity = 36/147 (24.49%), Postives = 70/147 (47.62%), Query Frame = 1 

Query: 30  IVISRKVVERGKETSFEQPNQWIEKSI-----------ELEEKNRLLEQENEKLRKETRQ 89
           I++ ++ ++  K  S +Q N+ +++ I           +L+++N  L+QENEKL++E  +
Sbjct: 785 IIMLQQEIDENKSNSLKQENEKLQEQIEELQKHSPSPKKLQQENNSLKQENEKLQEEIEE 844

Query: 90  WMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQ 149
             +    LQ E    +S     DKL+  +E+L   + ++ + N  LKN K     +    
Sbjct: 845 LQNTVDKLQNE-NNLQSLQEENDKLQDEIEELQSTVEKLQQENEELKNNKPIYSPSPKKL 904

Query: 150 DEYIKDLESGKEYFLELVNDLDTSIEK 166
                 L+   E   E + +L  +I+K
Sbjct: 905 QNENNSLKQENEKLQEQIEELQNTIDK 930

[Close]
BLAST of MELO3C021740 vs. TrEMBL
Match: A2DDP2_TRIVA (Viral A-type inclusion protein, putative OS=Trichomonas vaginalis GN=TVAG_198570 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.4e-04
Identity = 43/178 (24.16%), Postives = 76/178 (42.70%), Query Frame = 1 

Query: 24   NRRKNIIVISRKVVERGKETSFEQPNQWIEKSIE------------------LEEKNRLL 83
            N +  +   S K ++   E S +Q N+ +++ IE                  L+++N  L
Sbjct: 1568 NNKSKLYSPSPKKLQNENE-SLKQENEKLQEQIEKLQQENDSKPKYSPSPRKLQQENNSL 1627

Query: 84   EQENEKLRKETRQWMDHATYLQKELEKTKSFL--------------RNQDKLEKNLEKLD 143
            +QENEKL++E  Q  +    LQ+E  K+KS L                 DKL+  +E+L 
Sbjct: 1628 KQENEKLQEEIDQLQNTIEKLQQENNKSKSLLNTPNKLQNEYETLQEENDKLQDKIEELQ 1687

Query: 144  KEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQ 170
              + ++ + N  LKN K     +          L+   E   E + +L  +I+K + +
Sbjct: 1688 STIEKLQQENEELKNNKPIYSPSPKKLQNENNSLKQENEKLQEEIEELQNTIDKLQIE 1744


HSP 2 Score: 54.3 bits (129), Expect = 1.9e-04
Identity = 43/174 (24.71%), Postives = 74/174 (42.53%), Query Frame = 1 

Query: 24   NRRKNIIVISRKVVERGKETSFEQPNQWIEKSIE------------------LEEKNRLL 83
            N +  +   S K ++   E S +Q N+ +++ IE                  L+++N  L
Sbjct: 1173 NNKSKLYSPSPKKLQNENE-SLKQENEKLQEQIEKLQQENDSKPKYSPSPRKLQQENNSL 1232

Query: 84   EQENEKLRKETRQWMDHATYLQKELEKTKSFL--------------RNQDKLEKNLEKLD 143
            +QENEKL++E  Q  +    LQ+E  K+KS L                 DKL+  +E+L 
Sbjct: 1233 KQENEKLQEEIDQLQNTIEKLQQENNKSKSLLNTPNKLQNEYETLQEENDKLQDEIEELQ 1292

Query: 144  KEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEK 166
              + ++ + N  LKN K     +          L+   E   E + +L  +I+K
Sbjct: 1293 STVEKLQQENEELKNNKPIYSPSPKKLQNENNSLKQENEKLQEEIEELQNTIDK 1345


HSP 3 Score: 52.8 bits (125), Expect = 5.4e-04
Identity = 30/113 (26.55%), Postives = 55/113 (48.67%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRR 116
            +L+++N  L+QENEKL++E  +  +    LQ E    +S     DKL+  +E+L   + +
Sbjct: 1782 KLQQENNSLKQENEKLQEEIDELQNTVDKLQNE-NNLQSLQEENDKLQDEIEELQSTVEK 1841

Query: 117  MNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQ 170
            + + N  LKN K     +          L+   E   E + +L  +I+K + +
Sbjct: 1842 LQQENEELKNNKPIYSPSPKKLQNENNSLKQENEKLQEEIEELQNTIDKLQIE 1893


HSP 4 Score: 52.8 bits (125), Expect = 5.4e-04
Identity = 30/113 (26.55%), Postives = 55/113 (48.67%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRR 116
            +L+++N  L+QENEKL++E  +  +    LQ E    +S     DKL+  +E+L   + +
Sbjct: 1931 KLQQENNSLKQENEKLQEEIDELQNTVDKLQNE-NNLQSLQEENDKLQDEIEELQSTVEK 1990

Query: 117  MNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQ 170
            + + N  LKN K     +          L+   E   E + +L  +I+K + +
Sbjct: 1991 LQQENEELKNNKPIYSPSPKKLQNENNSLKQENEKLQEEIEELQNTIDKLQIE 2042


HSP 5 Score: 47.4 bits (111), Expect = 2.3e-02
Identity = 29/110 (26.36%), Postives = 59/110 (53.64%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELE-KTKSFLRNQDKLEKNLEKLDKEMR 116
            +L+++N  L+QE E L++E  Q     +Y   +L+ + +S  +  +KL++ +E+L   + 
Sbjct: 1355 KLQQENNSLKQEIENLKEEIEQNNKSKSYSPNKLQNENESLKQENEKLQEEIEELQNTVE 1414

Query: 117  RMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEK 166
            ++ + N  LKN K+   +    Q+E    L+   E   E + +L  +I+K
Sbjct: 1415 KLQQENDLLKNNKSVSPSPKKLQNEN-NSLKQENEKLQEEIEELQNTIDK 1463


HSP 6 Score: 46.6 bits (109), Expect = 3.9e-02
Identity = 37/163 (22.70%), Postives = 72/163 (44.17%), Query Frame = 1 

Query: 5    SVKKIKDKGRYEGYEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRL 64
            ++ K+++  +       + N  K  I   ++ +E+  ++    PN       +L+ +N  
Sbjct: 1342 TIDKLQNSNKSPNKLQQENNSLKQEIENLKEEIEQNNKSKSYSPN-------KLQNENES 1401

Query: 65   LEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSL 124
            L+QENEKL++E  +  +    LQ+E       L+N   +  + +KL  E   + + N  L
Sbjct: 1402 LKQENEKLQEEIEELQNTVEKLQQE----NDLLKNNKSVSPSPKKLQNENNSLKQENEKL 1461

Query: 125  KNEKTTLQATVG---SQDEYIKDLESGKEYFLELVNDLDTSIE 165
            + E   LQ T+    + ++  K L+   +  L   N L    E
Sbjct: 1462 QEEIEELQNTIDKLQNSNKSPKKLQQENKSMLNSPNKLQNEYE 1493


HSP 7 Score: 45.8 bits (107), Expect = 6.7e-02
Identity = 33/122 (27.05%), Postives = 54/122 (44.26%), Query Frame = 1 

Query: 58   LEEKNRLLEQENEKLRKETRQWMDHATYLQKELEK------------TKSFLRNQDKLEK 117
            L+++N  L+QENEKL++E  Q  +    LQ    K             +S  +  +KL++
Sbjct: 1143 LQQENNSLKQENEKLQEEINQLQNTIEKLQNNKSKLYSPSPKKLQNENESLKQENEKLQE 1202

Query: 118  NLEKLDKE----------MRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLEL 158
             +EKL +E           R++ + N SLK E   LQ  +      I+ L+        L
Sbjct: 1203 QIEKLQQENDSKPKYSPSPRKLQQENNSLKQENEKLQEEIDQLQNTIEKLQQENNKSKSL 1262


HSP 8 Score: 45.8 bits (107), Expect = 6.7e-02
Identity = 33/122 (27.05%), Postives = 54/122 (44.26%), Query Frame = 1 

Query: 58   LEEKNRLLEQENEKLRKETRQWMDHATYLQKELEK------------TKSFLRNQDKLEK 117
            L+++N  L+QENEKL++E  Q  +    LQ    K             +S  +  +KL++
Sbjct: 1538 LQQENNSLKQENEKLQEEINQLQNTIEKLQNNKSKLYSPSPKKLQNENESLKQENEKLQE 1597

Query: 118  NLEKLDKE----------MRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLEL 158
             +EKL +E           R++ + N SLK E   LQ  +      I+ L+        L
Sbjct: 1598 QIEKLQQENDSKPKYSPSPRKLQQENNSLKQENEKLQEEIDQLQNTIEKLQQENNKSKSL 1657


HSP 9 Score: 43.9 bits (102), Expect = 2.5e-01
Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRR 116
            +L+ +N  L+QENEKL++E            +EL+ T   L+N +K  K   KL +E + 
Sbjct: 1040 KLQNENNSLKQENEKLQEEI-----------EELQNTIDKLQNSNKSPK---KLQQENKS 1099

Query: 117  MNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDL 160
            M  +   L+NE  TLQ       + I++L+S  E  L+  NDL
Sbjct: 1100 MLNSPNKLQNEYETLQEENEKLQDEIEELQSTVEK-LQQENDL 1127


HSP 10 Score: 43.9 bits (102), Expect = 2.5e-01
Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRR 116
            +L+ +N  L+QENEKL++E            +EL+ T   L+N +K  K   KL +E + 
Sbjct: 1435 KLQNENNSLKQENEKLQEEI-----------EELQNTIDKLQNSNKSPK---KLQQENKS 1494

Query: 117  MNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDL 160
            M  +   L+NE  TLQ       + I++L+S  E  L+  NDL
Sbjct: 1495 MLNSPNKLQNEYETLQEENEKLQDEIEELQSTVEK-LQQENDL 1522


HSP 11 Score: 43.9 bits (102), Expect = 2.5e-01
Identity = 33/135 (24.44%), Postives = 68/135 (50.37%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQ--------DKLEKNLE 116
            +L+++N  L+QE E L++E  Q     +Y  K+L++  + L+ +        D+L+  ++
Sbjct: 1750 KLQQENNSLKQEIENLKEEIEQNNKSKSYSPKKLQQENNSLKQENEKLQEEIDELQNTVD 1809

Query: 117  KLDKE--MRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELV-------NDL 175
            KL  E  ++ + + N  L++E   LQ+TV    +  ++L++ K  +           N L
Sbjct: 1810 KLQNENNLQSLQEENDKLQDEIEELQSTVEKLQQENEELKNNKPIYSPSPKKLQNENNSL 1869


HSP 12 Score: 43.9 bits (102), Expect = 2.5e-01
Identity = 33/135 (24.44%), Postives = 68/135 (50.37%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQ--------DKLEKNLE 116
            +L+++N  L+QE E L++E  Q     +Y  K+L++  + L+ +        D+L+  ++
Sbjct: 1899 KLQQENNSLKQEIENLKEEIEQNNKSKSYSPKKLQQENNSLKQENEKLQEEIDELQNTVD 1958

Query: 117  KLDKE--MRRMNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELV-------NDL 175
            KL  E  ++ + + N  L++E   LQ+TV    +  ++L++ K  +           N L
Sbjct: 1959 KLQNENNLQSLQEENDKLQDEIEELQSTVEKLQQENEELKNNKPIYSPSPKKLQNENNSL 2018


HSP 13 Score: 42.4 bits (98), Expect = 7.4e-01
Identity = 30/124 (24.19%), Postives = 67/124 (54.03%), Query Frame = 1 

Query: 57   ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELE-KTKSFLRNQDKLEKNLEKLDKEMR 116
            +L+++N  L+QE E L++E  Q     +Y   +L+ + +S  +  +KL++ +E+L   + 
Sbjct: 940  KLQQENNSLKQEIENLKEEIEQNNKSKSYSPNKLQNENESLKQENEKLQEQIEELQNTVE 999

Query: 117  RMNKANRSLKNEKTTLQA--TVGSQDEYIKDLESGKEYFLELVND---LDTSIEKRETQI 175
            ++ + N  LKN K+   +   +  +++ +K+ +S      +L N+   L    EK + +I
Sbjct: 1000 KLQQENDLLKNNKSVSPSPKKLQQENDLLKNNKSVSPSPKKLQNENNSLKQENEKLQEEI 1059

[Close]
BLAST of MELO3C021740 vs. NCBI nr
Match: gi|659131250|ref|XP_008465588.1| (PREDICTED: polyamine-modulated factor 1-binding protein 1-like [Cucumis melo])

HSP 1 Score: 305.4 bits (781), Expect = 6.7e-80
Identity = 155/179 (86.59%), Postives = 165/179 (92.18%), Query Frame = 1 

Query: 3   WKSVKKIKDKGRYEG----YEAWQANRRKNIIVISRKVVERGKETSFEQPNQWIEKSIEL 62
           WKS++KIKDKG YEG    YE WQANRR NII ISR+VVERGKETSFEQPNQ IEKSI+L
Sbjct: 61  WKSIRKIKDKGHYEGVTSEYETWQANRRNNIIDISREVVERGKETSFEQPNQRIEKSIKL 120

Query: 63  EEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMN 122
           +EKNRLLEQENEKLRKET QWMDHATYLQ ELEKTKSFL+NQDKLEK+LE  DKEMRRMN
Sbjct: 121 KEKNRLLEQENEKLRKETSQWMDHATYLQNELEKTKSFLKNQDKLEKDLETSDKEMRRMN 180

Query: 123 KANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN 178
           KANRSLKNEKTTLQATVGS+DEYIKDLE+GKEYFLELVNDL+TSI KRETQIMDLEAQN
Sbjct: 181 KANRSLKNEKTTLQATVGSEDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQN 239

[Close]
BLAST of MELO3C021740 vs. NCBI nr
Match: gi|659134033|ref|XP_008467001.1| (PREDICTED: tropomyosin-1-like, partial [Cucumis melo])

HSP 1 Score: 266.2 bits (679), Expect = 4.5e-68
Identity = 133/150 (88.67%), Postives = 144/150 (96.00%), Query Frame = 1 

Query: 28  NIIVISRKVVERGKETSFEQPNQWIEKSIELEEKNRLLEQENEKLRKETRQWMDHATYLQ 87
           +II ISR+VVERGKETSFEQPN+WIEKSIELEEKNRLLEQENEKLRKET QWMDHATYLQ
Sbjct: 6   DIIDISREVVERGKETSFEQPNRWIEKSIELEEKNRLLEQENEKLRKETSQWMDHATYLQ 65

Query: 88  KELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKANRSLKNEKTTLQATVGSQDEYIKDLES 147
            +LEKTKSFL+NQDKLEK+LE LDKEMRRMNKANRSLKNEKTT QAT+GSQDEYIKDLE+
Sbjct: 66  NKLEKTKSFLKNQDKLEKDLETLDKEMRRMNKANRSLKNEKTTFQATMGSQDEYIKDLEN 125

Query: 148 GKEYFLELVNDLDTSIEKRETQIMDLEAQN 178
           GKEYFL+LVNDL+TSI KRET+IMDLEAQN
Sbjct: 126 GKEYFLKLVNDLNTSIRKRETKIMDLEAQN 155

[Close]
BLAST of MELO3C021740 vs. NCBI nr
Match: gi|659125951|ref|XP_008462935.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103501197 [Cucumis melo])

HSP 1 Score: 80.5 bits (197), Expect = 3.5e-12
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 1 

Query: 135 VGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQN 178
           +GSQDEYIKDLE+GKEYFLELVNDL+TSI KRETQIMDLEAQN
Sbjct: 1   MGSQDEYIKDLENGKEYFLELVNDLNTSIGKRETQIMDLEAQN 43

[Close]
BLAST of MELO3C021740 vs. NCBI nr
Match: gi|700210231|gb|KGN65327.1| (hypothetical protein Csa_1G328390 [Cucumis sativus])

HSP 1 Score: 63.2 bits (152), Expect = 5.8e-07
Identity = 31/107 (28.97%), Postives = 64/107 (59.81%), Query Frame = 1 

Query: 62  NRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRRMNKAN 121
           + +L  ENE LRKE ++W+  AT  +++LE+ +  L+ Q +LEK++  L+ E  ++ K N
Sbjct: 2   SHVLATENEGLRKEVKRWVQKATTSERQLEEAQRHLQRQSELEKDMNSLNIEAIQIRKKN 61

Query: 122 RSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRET 169
           + L  +  T+ +   +Q   I++L+   E   ++V D  ++++++ T
Sbjct: 62  KRLLRDIATMHSEAEAQKVCIRELKQELERVSKVVIDFQSALDEQAT 108

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BLAST of MELO3C021740 vs. NCBI nr
Match: gi|543734565|ref|XP_005508277.1| (PREDICTED: calcium-binding and coiled-coil domain-containing protein 2 [Columba livia])

HSP 1 Score: 60.8 bits (146), Expect = 2.9e-06
Identity = 33/120 (27.50%), Postives = 63/120 (52.50%), Query Frame = 1 

Query: 57  ELEEKNRLLEQENEKLRKETRQWMDHATYLQKELEKTKSFLRNQDKLEKNLEKLDKEMRR 116
           ELE +N+ L +ENE+L+            LQ+EL+KT+    N + L  N+EKL+ E+  
Sbjct: 148 ELELQNKNLHEENEELKASCASLQQQNINLQEELKKTQELQNNVESLRSNIEKLELELNS 207

Query: 117 MNKANRSLKNEKTTLQATVGSQDEYIKDLESGKEYFLELVNDLDTSIEKRETQIMDLEAQ 176
           + K N+ LK +     A +    E I+++ S K+     +      +++ ++Q+++ E +
Sbjct: 208 LRKENKHLKEQDDCRGAELLQLKEQIQNVSSDKDRLASRLRAALEHMDQLQSQVLNYEKE 267

The following BLAST results are available for this feature:
BLAST of MELO3C021740 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TPM1_YEAST3.7e-0624.03Tropomyosin-1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPM1 P... [more]
BLAST of MELO3C021740 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LWU7_CUCSA4.0e-0728.97Uncharacterized protein OS=Cucumis sativus GN=Csa_1G328390 PE=4 SV=1[more]
A2DDP2_TRIVA3.4e-0624.49Viral A-type inclusion protein, putative OS=Trichomonas vaginalis GN=TVAG_198570... [more]
A2DDP2_TRIVA1.4e-0424.16Viral A-type inclusion protein, putative OS=Trichomonas vaginalis GN=TVAG_198570... [more]
BLAST of MELO3C021740 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659131250|ref|XP_008465588.1|6.7e-8086.59PREDICTED: polyamine-modulated factor 1-binding protein 1-like [Cucumis melo][more]
gi|659134033|ref|XP_008467001.1|4.5e-6888.67PREDICTED: tropomyosin-1-like, partial [Cucumis melo][more]
gi|659125951|ref|XP_008462935.1|3.5e-1290.70PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103501197 [Cucumis me... [more]
gi|700210231|gb|KGN65327.1|5.8e-0728.97hypothetical protein Csa_1G328390 [Cucumis sativus][more]
gi|543734565|ref|XP_005508277.1|2.9e-0627.50PREDICTED: calcium-binding and coiled-coil domain-containing protein 2 [Columba ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021740T1MELO3C021740T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 93..134
score: -coord: 55..82
score: -coord: 156..176
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021740Cucurbita moschata (Rifu)cmomeB179
MELO3C021740Cucurbita moschata (Rifu)cmomeB357
MELO3C021740Wild cucumber (PI 183967)cpimeB013
MELO3C021740Cucumber (Chinese Long) v2cumeB017
MELO3C021740Watermelon (Charleston Gray)mewcgB140
MELO3C021740Watermelon (97103) v1mewmB156
MELO3C021740Cucurbita pepo (Zucchini)cpemeB027
MELO3C021740Cucurbita pepo (Zucchini)cpemeB477
MELO3C021740Bottle gourd (USVL1VR-Ls)lsimeB180
MELO3C021740Cucumber (Gy14) v2cgybmeB012
MELO3C021740Silver-seed gourdcarmeB0119
MELO3C021740Cucumber (Chinese Long) v3cucmeB012
MELO3C021740Watermelon (97103) v2mewmbB141
MELO3C021740Wax gourdmewgoB164
MELO3C021740Cucumber (Gy14) v1cgymeB543
MELO3C021740Cucurbita maxima (Rimu)cmameB192
MELO3C021740Cucurbita maxima (Rimu)cmameB364