MELO3C021738 (gene) Melon (DHL92) v3.5.1

NameMELO3C021738
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNck-associated protein 1
Locationchr12 : 16365713 .. 16365988 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACATTATTCAACCACTTGTAGTGCAAAAGATTAACATTTGGATTTTTTTTTTTTTTTATTTTCATTGCAGATGTGTTGACGAGCTAGAATCCCAATTATCGAAGCACGGAAGTCTTAAAAAGCTTTACTTCTACCACCAGCACCTTACAGCAGTGAGTTATTGTTTTCAGAAACTGCATGGTCCCTATTACCTATATATTTGCAGCTATATTTTGAATATTATGTTTAATTTATAAATGCACTGATAACTTGCTAATGAGCTTGTCTCTGTTTTTCGAAAGGTCTTCAGAAATACAATGTTTGGACCTGAAGGGCGACCTCAACATTGCTGTGCATGGCTTGGCATTGCCAGTAGTTTTCCTGAGTGTGCTTCGCCAATTGTCCCAGAGGAGGTAATTGTTCAACTCATCTTCCTTCTTATAAATCTTCCATCTCGGATTAGGATAGTCCTCTTTTTTTTTTTTTGGCCATATTGTGGGGTATTTGGATTGAGATTAGCAATATTTTTAGGGGTTCAGAGGTTATGGGAGATGCTAGATGTTGTTAGTTTTAATACTTCTTTGTGGGTGTCAGTCTGTCCCTCATTTTGTTGTTATCCTTACCTTACCGGCTAGGTTTTATTCTTTTAGATTGAAGTTCGTTCCTGTATAGCTAGGGTTTGGACTCCTTTTGTGGGGTTATTTTATTACTGGCTTGGCCGTGCATATTCCTTAATTTTACTTGATGAAAGCTTGGTTTCTCACTTCTACAACTATATAAATATACCAAATGAAACCGACATCAAATTTGTAGCGTACAAACTGAATTACAGTCCCCCAACTTGGTGGCATCCAGCTTTGTGATTACCAAAGAAGAATGAGCAAGGCGGTTGTTTACATGGCTTAATATTAAGGTGTGACAACTTCTAAAGGAAAGATTTCACCAACTATTAGAGAGTCTTTCTTTCTCTAGAGTGAGGCTTTCTTTGATTCTTTACTTTGCCATTGGAACTTGGAGTAGTACCAAGAGCCTTCAAATTGAGGCATGTGGAGCAATTAGTTTTTTCATTTTTGTGTTTTCATCAACTGAAACGTCTTCAAATTCTCTCAACTGGAATGAGAAGTCTATGGTAAATGTTGATGTACATATACAACACTGTTTTAAAATCTTATGAAGGATTAAGTAAAGATTTGTTGGAGTTGATGTTGATATCTTAAAAGTAGAGAATGAGTGTGAGAAATGAGAGTTTTAGATTATTTCTCTGATATCTGTCTGTAAATGTTTACAATTTGTCTTTAGAGACATCTTGTAGTGGACTAGTGGTGATGGGATCATGATGATTTTTATCTTGGGGGTCTGATTTAGTTCATATTCATATCCACCTATGATTGCATTTCCTTATTGCAAACTCAATCAAATATTTCGTAGTAGCATATTTGATTTGAAGTGCATGGCAGGTCACCAGAATTGGCAGGGACGCTGTACTCTATGTAGAATCTCTCATTGAGTCTATTATGGGTGGTTTGGAGGGATTAATTAATATCCTTGACTCAGAAGGAGGATTTGGTGCCCTAGAGATTCAGGTACTTGTATATTGCGACACTTCAGGCAGCATTCTCATTTGATTAACCAAATTTCACTCTGCTTTCATTTTTGTAAATATTGCTGAGCCTAATGCTTTAACGAATTCCAGCTTCTACCAGAGCAAGCAGCTTCTTTTCTGAATTATGCTTCGAGAGCTTCAATTCCTTTGACTAAATCTCCAAAAGGAGCAGCTGGTTTTCCTTTACCTGGCTATGAGAGCTATCCTGAGAATAATGGTTCAATCAAAATGTAAGCGGTTTTCTTTCTTATAACTTTGGTTTTACCAATTTTGTGACACGGTGGGGTCTTTGAGTTGAGAGGAATAATAGGATTGTCAGGGGGCGGGAGGGTCTTCTAGTGATATTTGGTCCCTGGTTACATTCTGTCTCCCTTTGAGCATCAGTGACAAAGCCTATCTATAGTTAATTACACTCTTAATCTTATTTTACCTCACTAGAGTCCCTTTGTGTAATTTGACCCCTTTTGAAACTGCTTATGTGTTTGTATCCGTGTGTTTTCTCATTTTTTCTCACTAAATATCCGGTTAAAGAAAAACTCCAGTAAATATTAACCTGAAGTGGTTTAGCAACGGATTATTTTGTCCAAGTAATCTGTTTCTAGGATGTTGCCTGGAATTTTTTATGCTCTGTTTTGACTGTTTTGGATACTTTGTGTTTCTTATGGAATAAGGGAAAAAAGAATTCTTTTAATACGTTGTTAGTTTTATCATTCAATAAAATGAAGTTAGTCTTAAAAAATTCTCTGACAGGCTTGAAGCTGCAATGCAAAGGTTAACCAATCTATGCTCTGTTCTGAATGATATGGAGCCGATATGTGTTCTAAATCACGTTTTTGTTCTGAGGGAGGTATGA

mRNA sequence

ATGAACATTATTCAACCACTTGTAGTGCAAAAGATTAACATTTGGATTTTTTTTTTTTTTTATTTTCATTGCAGATGTGTTGACGAGCTAGAATCCCAATTATCGAAGCACGGAAGTCTTAAAAAGCTTTACTTCTACCACCAGCACCTTACAGCAGTCTTCAGAAATACAATGTTTGGACCTGAAGGGCGACCTCAACATTGCTGTGCATGGCTTGGCATTGCCAGTAGTTTTCCTGAGTGTGCTTCGCCAATTGTCCCAGAGGAGGTCACCAGAATTGGCAGGGACGCTGTACTCTATGTAGAATCTCTCATTGAGTCTATTATGGGTGGTTTGGAGGGATTAATTAATATCCTTGACTCAGAAGGAGGATTTGGTGCCCTAGAGATTCAGCTTCTACCAGAGCAAGCAGCTTCTTTTCTGAATTATGCTTCGAGAGCTTCAATTCCTTTGACTAAATCTCCAAAAGGAGCAGCTGGTTTTCCTTTACCTGGCTATGAGAGCTATCCTGAGAATAATGGTTCAATCAAAATGCTTGAAGCTGCAATGCAAAGGTTAACCAATCTATGCTCTGTTCTGAATGATATGGAGCCGATATGTGTTCTAAATCACGTTTTTGTTCTGAGGGAGGTATGA

Coding sequence (CDS)

ATGAACATTATTCAACCACTTGTAGTGCAAAAGATTAACATTTGGATTTTTTTTTTTTTTTATTTTCATTGCAGATGTGTTGACGAGCTAGAATCCCAATTATCGAAGCACGGAAGTCTTAAAAAGCTTTACTTCTACCACCAGCACCTTACAGCAGTCTTCAGAAATACAATGTTTGGACCTGAAGGGCGACCTCAACATTGCTGTGCATGGCTTGGCATTGCCAGTAGTTTTCCTGAGTGTGCTTCGCCAATTGTCCCAGAGGAGGTCACCAGAATTGGCAGGGACGCTGTACTCTATGTAGAATCTCTCATTGAGTCTATTATGGGTGGTTTGGAGGGATTAATTAATATCCTTGACTCAGAAGGAGGATTTGGTGCCCTAGAGATTCAGCTTCTACCAGAGCAAGCAGCTTCTTTTCTGAATTATGCTTCGAGAGCTTCAATTCCTTTGACTAAATCTCCAAAAGGAGCAGCTGGTTTTCCTTTACCTGGCTATGAGAGCTATCCTGAGAATAATGGTTCAATCAAAATGCTTGAAGCTGCAATGCAAAGGTTAACCAATCTATGCTCTGTTCTGAATGATATGGAGCCGATATGTGTTCTAAATCACGTTTTTGTTCTGAGGGAGGTATGA

Protein sequence

MNIIQPLVVQKINIWIFFFFYFHCRCVDELESQLSKHGSLKKLYFYHQHLTAVFRNTMFGPEGRPQHCCAWLGIASSFPECASPIVPEEVTRIGRDAVLYVESLIESIMGGLEGLINILDSEGGFGALEIQLLPEQAASFLNYASRASIPLTKSPKGAAGFPLPGYESYPENNGSIKMLEAAMQRLTNLCSVLNDMEPICVLNHVFVLREV*
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019137Nck-associated_protein-1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021738T2MELO3C021738T2mRNA
MELO3C021738T1MELO3C021738T1mRNA


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019137Nck-associated protein 1PFAMPF09735Nckap1coord: 20..210
score: 1.4
NoneNo IPR availableunknownCoilCoilcoord: 176..196
scor
NoneNo IPR availablePANTHERPTHR12093FAMILY NOT NAMEDcoord: 21..210
score: 1.3E

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None