MELO3C021711 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021711
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDNA-directed RNA polymerase
Locationchr12 : 15958403 .. 15958560 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGCTTTGGGTGACATGTGTGACACAACTATGGAAGATCTAACACAAATTATTCAGCAGACCCGACAACTCAATGTTGTCGACACAGACCGTAGACGCATGCGACCTATTCGACGACGGCAAGGTGATGATGTCGTAGAGGGTGATGAAGAAAATTGA

mRNA sequence

AAGCTTTGGGTGACATGTGTGACACAACTATGGAAGATCTAACACAAATTATTCAGCAGACCCGACAACTCAATGTTGTCGACACAGACCGTAGACGCATGCGACCTATTCGACGACGGCAAGGTGATGATGTCGTAGAGGGTGATGAAGAAAATTGA

Coding sequence (CDS)

AAGCTTTGGGTGACATGTGTGACACAACTATGGAAGATCTAACACAAATTATTCAGCAGACCCGACAACTCAATGTTGTCGACACAGACCGTAGACGCATGCGACCTATTCGACGACGGCAAGGTGATGATGTCGTAGAGGGTGATGAAGAAAATTGA

Protein sequence

ALGDMCDTTMEDLTQIIQQTRQLNVVDTDRRRMRPIRRRQGDDVVEGDEEN*
Homology
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BLAST of MELO3C021711 vs. NCBI nr
Match: gi|659119282|ref|XP_008459571.1| (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 2.1e-07
Identity = 31/54 (57.41%), Postives = 40/54 (74.07%), Query Frame = 1 

Query: 2   LGDMCDTTMEDLTQIIQQTRQLNVVDTDRRRMRPIRRRQG----DDVVEGDEEN 52
           LG MCD  +E++  IIQQT++LNV DTDRR +R  RRRQ     DD+VEGD++N
Sbjct: 448 LGSMCDQFLENIEHIIQQTKRLNVADTDRRCIRRKRRRQDNNVVDDIVEGDQDN 501

The following BLAST results are available for this feature:
BLAST of MELO3C021711 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659119282|ref|XP_008459571.1|2.1e-0757.41PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis mel... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021711T1MELO3C021711T1mRNA