MELO3C021689.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C021689.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionagamous-like MADS-box protein AGL62
Locationchr12 : 15656631 .. 15657311 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGCTCAACTCTCTCTTTCAAATTGCAGAACCTTTCCTAACGATGAAGAAATCTTTAGGGCGTCGAAAGATTGAGATCAAAAAGCTCGACAAAAAGAGTACACAGCAGGTTACTTTCTCTAAACGCCGCGCCGGACTTTTCAACAAGGCCGCCGAACTTTCCATTCTCTGCGGCGCTGAGATCGCCGTCCTCGTCTTCTCTTCTCGTGGAAAAATCTATACGTTCGGCCATCCCAATGTCGACGCTCTCCTCGACCGCTTTCTCACCGGAAACAATACTGTTCCGCCCAAGCCGGCGGAGGCCTATCTCCCCATTGCGGAGTTGAATCGCGATTTGTCTAAAGCGGAAGCAGAGTTTGAAATCGAGAAGAGGCGTGCGGCGGAGAGATCGAGGAACAGCGAGCGATTTTGGTGGGATGAGCCGCTGGAAAGTATGAAAATCGACGAGTTGAAGCGATTTCGTTCATCATTGGTGGAATTGAGAGCAAACGTGGTGGAGAGATTAGAGAAAATTGAAGATCGTCACTGTGTAACTCCATCAATAGACATAGCCGAAAGCATCCAATGGCCGGAAACGTCGTCGATTCAGCTTGCCGCCGGAAACAACCATTGTCTGCCGTCGTTTCACATGGCTGAAAATCGGTCAGTGGCGATGGATTGGGAAGCGGAGATTTGGGGTTAG

mRNA sequence

ACGCTCAACTCTCTCTTTCAAATTGCAGAACCTTTCCTAACGATGAAGAAATCTTTAGGGCGTCGAAAGATTGAGATCAAAAAGCTCGACAAAAAGAGTACACAGCAGGTTACTTTCTCTAAACGCCGCGCCGGACTTTTCAACAAGGCCGCCGAACTTTCCATTCTCTGCGGCGCTGAGATCGCCGTCCTCGTCTTCTCTTCTCGTGGAAAAATCTATACGTTCGGCCATCCCAATGTCGACGCTCTCCTCGACCGCTTTCTCACCGGAAACAATACTGTTCCGCCCAAGCCGGCGGAGGCCTATCTCCCCATTGCGGAGTTGAATCGCGATTTGTCTAAAGCGGAAGCAGAGTTTGAAATCGAGAAGAGGCGTGCGGCGGAGAGATCGAGGAACAGCGAGCGATTTTGGTGGGATGAGCCGCTGGAAAGTATGAAAATCGACGAGTTGAAGCGATTTCGTTCATCATTGGTGGAATTGAGAGCAAACGTGGTGGAGAGATTAGAGAAAATTGAAGATCGTCACTGTGTAACTCCATCAATAGACATAGCCGAAAGCATCCAATGGCCGGAAACGTCGTCGATTCAGCTTGCCGCCGGAAACAACCATTGTCTGCCGTCGTTTCACATGGCTGAAAATCGGTCAGTGGCGATGGATTGGGAAGCGGAGATTTGGGGTTAG

Coding sequence (CDS)

ATGAAGAAATCTTTAGGGCGTCGAAAGATTGAGATCAAAAAGCTCGACAAAAAGAGTACACAGCAGGTTACTTTCTCTAAACGCCGCGCCGGACTTTTCAACAAGGCCGCCGAACTTTCCATTCTCTGCGGCGCTGAGATCGCCGTCCTCGTCTTCTCTTCTCGTGGAAAAATCTATACGTTCGGCCATCCCAATGTCGACGCTCTCCTCGACCGCTTTCTCACCGGAAACAATACTGTTCCGCCCAAGCCGGCGGAGGCCTATCTCCCCATTGCGGAGTTGAATCGCGATTTGTCTAAAGCGGAAGCAGAGTTTGAAATCGAGAAGAGGCGTGCGGCGGAGAGATCGAGGAACAGCGAGCGATTTTGGTGGGATGAGCCGCTGGAAAGTATGAAAATCGACGAGTTGAAGCGATTTCGTTCATCATTGGTGGAATTGAGAGCAAACGTGGTGGAGAGATTAGAGAAAATTGAAGATCGTCACTGTGTAACTCCATCAATAGACATAGCCGAAAGCATCCAATGGCCGGAAACGTCGTCGATTCAGCTTGCCGCCGGAAACAACCATTGTCTGCCGTCGTTTCACATGGCTGAAAATCGGTCAGTGGCGATGGATTGGGAAGCGGAGATTTGGGGTTAG

Protein sequence

MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTFGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSSIQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG
Homology
[Close]
BLAST of MELO3C021689.2 vs. NCBI nr
Match: XP_008458954.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 418.7 bits (1075), Expect = 1.2e-113
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180
           RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180

Query: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 213
           IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG
Sbjct: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 212

[Close]
BLAST of MELO3C021689.2 vs. NCBI nr
Match: XP_004139610.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN65027.1 hypothetical protein Csa_1G181400 [Cucumis sativus])

HSP 1 Score: 285.4 bits (729), Expect = 1.6e-73
Identity = 149/212 (70.28%), Postives = 168/212 (79.25%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKS GRRKIEIK+LDK +T+QVTFSKRR GLFNKAAELS+LCGAEIA+L+FSSRGK+YT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVDALLDRFLTG N +PPKPAEAYLP+ ELN DL KAEAEFEIEK+RA ER RNSE
Sbjct: 61  FGHPNVDALLDRFLTG-NFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSE 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180
           RFWWDE LE M++DELK FRSSL++LRANV  RLEKI       P +  + SI       
Sbjct: 121 RFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSI------- 180

Query: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 213
             +  G N C  SFH+ EN+S AMDWE EIWG
Sbjct: 181 --VLGGENQCAASFHVGENQSFAMDWEEEIWG 202

[Close]
BLAST of MELO3C021689.2 vs. NCBI nr
Match: XP_023512238.1 (agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 246.9 bits (629), Expect = 6.2e-62
Identity = 133/189 (70.37%), Postives = 151/189 (79.89%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKSLGRRKIEIKKL+KKSTQQVTFSKRRAGLFNKAAELS+LCGAEIA+LV SSR K+YT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSTQQVTFSKRRAGLFNKAAELSVLCGAEIAILVASSRNKLYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNV++LLDRFLTG N+ PPKPAEAYLP+ ELNRD     AE++IEKRR AER  N +
Sbjct: 61  FGHPNVESLLDRFLTG-NSAPPKPAEAYLPLDELNRDFDDVAAEYDIEKRRTAERLSN-D 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIED-----------RHCVTPSIDI 179
           RFWWDEPLESMKIDELKRFRSSLV+LR  V ER+EK              +    PSID+
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVDLRGKVAERVEKFTAMRKEGSLLPALQPSTPPSIDL 180

[Close]
BLAST of MELO3C021689.2 vs. NCBI nr
Match: XP_022944450.1 (agamous-like MADS-box protein AGL61 [Cucurbita moschata])

HSP 1 Score: 245.0 bits (624), Expect = 2.3e-61
Identity = 128/159 (80.50%), Postives = 142/159 (89.31%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKSLGRRKIEIKKL+KKS+QQVTFSKRRAGLFNKAAELS+LCGAEIA+LV S+  K+YT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSASNKLYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNV++LLDRFLTGN++ PPKPAEAY P+ ELNRD     AEF+IEKRRAAERS N +
Sbjct: 61  FGHPNVESLLDRFLTGNSS-PPKPAEAYFPLQELNRDFDDVAAEFDIEKRRAAERSSN-D 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIED 160
           RFWWDEPLESMKIDELKRFRSSLVELRA V ER+EK  D
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRAKVAERVEKFTD 157

[Close]
BLAST of MELO3C021689.2 vs. NCBI nr
Match: XP_023513250.1 (agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo] >XP_023513251.1 agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.0 bits (624), Expect = 2.3e-61
Identity = 128/159 (80.50%), Postives = 141/159 (88.68%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKSLGRRKIEIKKL+KKS+QQVTFSKRRAGLFNKAAELS+LCGAEIA+LV S+  K+YT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNV++LLDRFLTG N+ PPKPAEAYLP+ ELNRD     AEF+IEKRRAAERS N +
Sbjct: 61  FGHPNVESLLDRFLTG-NSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSN-D 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIED 160
           RFWWDEPLESMKIDELKRFRSSLVELR  V ER+EK  D
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTD 157

[Close]
BLAST of MELO3C021689.2 vs. TAIR10
Match: AT5G60440.1 (AGAMOUS-like 62)

HSP 1 Score: 120.9 bits (302), Expect = 9.2e-28
Identity = 65/160 (40.62%), Postives = 104/160 (65.00%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           +KKS GR+KIE+ K+  +S  QVTFSKRR+GLF KA+EL  LCGAE+A++VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDALLDRFLTGNNTVPP--------KPAEAYLPIAELNRDLSKAEAEFEIEKRRA 120
           FGHPNVD+++DRF+  NN +PP        +       + +LN  L++  ++ E EK++ 
Sbjct: 62  FGHPNVDSVIDRFI-NNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKY 121

Query: 121 AERSRNSERF-----WWDEPLESMKIDELKRFRSSLVELR 148
            E  +  E+      WW++P+E + + +L+ F+ +L  L+
Sbjct: 122 DELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]
BLAST of MELO3C021689.2 vs. TAIR10
Match: AT2G24840.1 (AGAMOUS-like 61)

HSP 1 Score: 115.5 bits (288), Expect = 3.9e-26
Identity = 70/172 (40.70%), Postives = 105/172 (61.05%), Query Frame = 0 

Query: 2   KKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTF 61
           K+S+GR+KI + K+ K+S +QVTFSKRRAGLF KA+EL  LCGAEI ++VFS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDALLDRFLTGNN-------TVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRA-- 121
           GHP+V+++LDR+++ NN        +   PA +     ELN  L+   +E E EK++   
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAAS----CELNMQLTHILSEVEEEKKKGQA 178

Query: 122 -----AERSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIED 160
                 E  R S   WW++P+E M + +L+  + +L ELR  VV  +    +
Sbjct: 179 MEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNE 226

[Close]
BLAST of MELO3C021689.2 vs. TAIR10
Match: AT1G65360.1 (AGAMOUS-like 23)

HSP 1 Score: 99.8 bits (247), Expect = 2.2e-21
Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           +KK+LGRRK+EI K+ K+S  QVTFSKR+AGLF KA+E   LC A+IA++VFS  GK+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDALLDRF---LTGNNTVPPKPAEAYLPIAELNRDLSK 101
           FGHPNVD LLD F   + G+N      +   L +  LN+  ++
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTE 104

[Close]
BLAST of MELO3C021689.2 vs. TAIR10
Match: AT1G17310.1 (MADS-box transcription factor family protein)

HSP 1 Score: 98.2 bits (243), Expect = 6.4e-21
Identity = 72/195 (36.92%), Postives = 107/195 (54.87%), Query Frame = 0 

Query: 2   KKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTF 61
           K + GR+KIEIKK+++++ +QVTFSKRR GLF K+AELS+L GA+IAV+ FS   +IY F
Sbjct: 44  KTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRF 103

Query: 62  GHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSER 121
           GH  VDAL+D++L  +    P   E Y                       AA+    S R
Sbjct: 104 GH--VDALIDKYLRKS----PVKLEGY-------------------SGDNAAD--EESRR 163

Query: 122 FWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCV--TPSIDIAESIQWPETS 181
            WW+ P+ES+  +EL+ + ++L  LR N+ +++  + +   V   P+  I   + W  T 
Sbjct: 164 PWWERPVESVPEEELEEYMAALSMLRENIGKKIVAMGNDRTVDMVPAWPI-NVMGWKPTM 210

Query: 182 SIQ----LAAGNNHC 191
            +Q    L  G N C
Sbjct: 224 DMQKLENLTDGVNRC 210

[Close]
BLAST of MELO3C021689.2 vs. TAIR10
Match: AT2G34440.1 (AGAMOUS-like 29)

HSP 1 Score: 92.4 bits (228), Expect = 3.5e-19
Identity = 56/168 (33.33%), Postives = 97/168 (57.74%), Query Frame = 0 

Query: 5   LGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTFGHP 64
           +GRRKI+++ +   +T+QVTFSKRR GLF KA+EL+ LC AE+ ++VFS  GK +++G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 65  NVDALLDRFL---TGNNTVPPKPAEAYLP-IAELNRDLSKAEAEFEIEKRRAAE-----R 124
           N+D++ +RF+     +++   + +  Y P +  L+  L     E E EK R  +      
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 125 SRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCV 164
           S   ERF   E +E++ +DEL  ++  L  +   +  ++  ++   C+
Sbjct: 121 SAGDERF--KESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCL 166

[Close]
BLAST of MELO3C021689.2 vs. Swiss-Prot
Match: sp|Q9FKK2|AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.7e-26
Identity = 65/160 (40.62%), Postives = 104/160 (65.00%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           +KKS GR+KIE+ K+  +S  QVTFSKRR+GLF KA+EL  LCGAE+A++VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDALLDRFLTGNNTVPP--------KPAEAYLPIAELNRDLSKAEAEFEIEKRRA 120
           FGHPNVD+++DRF+  NN +PP        +       + +LN  L++  ++ E EK++ 
Sbjct: 62  FGHPNVDSVIDRFI-NNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKY 121

Query: 121 AERSRNSERF-----WWDEPLESMKIDELKRFRSSLVELR 148
            E  +  E+      WW++P+E + + +L+ F+ +L  L+
Sbjct: 122 DELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]
BLAST of MELO3C021689.2 vs. Swiss-Prot
Match: sp|Q4PSU4|AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 7.0e-25
Identity = 70/172 (40.70%), Postives = 105/172 (61.05%), Query Frame = 0 

Query: 2   KKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTF 61
           K+S+GR+KI + K+ K+S +QVTFSKRRAGLF KA+EL  LCGAEI ++VFS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDALLDRFLTGNN-------TVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRA-- 121
           GHP+V+++LDR+++ NN        +   PA +     ELN  L+   +E E EK++   
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAAS----CELNMQLTHILSEVEEEKKKGQA 178

Query: 122 -----AERSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIED 160
                 E  R S   WW++P+E M + +L+  + +L ELR  VV  +    +
Sbjct: 179 MEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNE 226

[Close]
BLAST of MELO3C021689.2 vs. Swiss-Prot
Match: sp|O80807|AGL23_ARATH (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.0e-20
Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           +KK+LGRRK+EI K+ K+S  QVTFSKR+AGLF KA+E   LC A+IA++VFS  GK+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDALLDRF---LTGNNTVPPKPAEAYLPIAELNRDLSK 101
           FGHPNVD LLD F   + G+N      +   L +  LN+  ++
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTE 104

[Close]
BLAST of MELO3C021689.2 vs. Swiss-Prot
Match: sp|O64703|AGL29_ARATH (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 6.3e-18
Identity = 56/168 (33.33%), Postives = 97/168 (57.74%), Query Frame = 0 

Query: 5   LGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTFGHP 64
           +GRRKI+++ +   +T+QVTFSKRR GLF KA+EL+ LC AE+ ++VFS  GK +++G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 65  NVDALLDRFL---TGNNTVPPKPAEAYLP-IAELNRDLSKAEAEFEIEKRRAAE-----R 124
           N+D++ +RF+     +++   + +  Y P +  L+  L     E E EK R  +      
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 125 SRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCV 164
           S   ERF   E +E++ +DEL  ++  L  +   +  ++  ++   C+
Sbjct: 121 SAGDERF--KESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCL 166

[Close]
BLAST of MELO3C021689.2 vs. Swiss-Prot
Match: sp|Q9LMM8|AGL28_ARATH (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.1e-17
Identity = 62/170 (36.47%), Postives = 93/170 (54.71%), Query Frame = 0 

Query: 2   KKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTF 61
           +K+LGRRKIE+ K+  +S  QVTFSKRR+GLF K +EL  LC AEIA++VFS  GK Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDALLD----RFLTGNNTVPPKPAEAYLPIAELN------RDLSKAEAEFEIEKRR 121
           GHPNV+ LLD    R +  NNT   + +   L I  LN                      
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAE-SRTKLRIQMLNXXXXXXXXXXXXXXXXXXXXXX 122

Query: 122 AAERSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRH 162
               ++++E++W + P E + + +    +  L  L+  V E++ ++  R+
Sbjct: 123 XXXENKDAEKWWRNSPTE-LNLAQSTSMKCDLEALKKEVDEKVAQLHHRN 170

[Close]
BLAST of MELO3C021689.2 vs. TrEMBL
Match: tr|A0A1S3CAA4|A0A1S3CAA4_CUCME (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103498214 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 7.8e-114
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180
           RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180

Query: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 213
           IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG
Sbjct: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 212

[Close]
BLAST of MELO3C021689.2 vs. TrEMBL
Match: tr|A0A0A0LW53|A0A0A0LW53_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181400 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.0e-73
Identity = 149/212 (70.28%), Postives = 168/212 (79.25%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKS GRRKIEIK+LDK +T+QVTFSKRR GLFNKAAELS+LCGAEIA+L+FSSRGK+YT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVDALLDRFLTG N +PPKPAEAYLP+ ELN DL KAEAEFEIEK+RA ER RNSE
Sbjct: 61  FGHPNVDALLDRFLTG-NFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSE 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180
           RFWWDE LE M++DELK FRSSL++LRANV  RLEKI       P +  + SI       
Sbjct: 121 RFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSI------- 180

Query: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 213
             +  G N C  SFH+ EN+S AMDWE EIWG
Sbjct: 181 --VLGGENQCAASFHVGENQSFAMDWEEEIWG 202

[Close]
BLAST of MELO3C021689.2 vs. TrEMBL
Match: tr|A0A0A0LLS2|A0A0A0LLS2_CUCSA (Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.9e-52
Identity = 116/157 (73.89%), Postives = 131/157 (83.44%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKSLGR+KIEIKKL+ KS +QVTFSKRRAGLFNKAAELSIL GAEIA+LVFSS  KIYT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVD L+DRFLT +N VPPKP EAYLP+ ELNRDL    AEFE EKRR AER R + 
Sbjct: 61  FGHPNVDFLIDRFLT-SNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRR-AERMRKTG 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKI 158
            FWWDE +E M I++LKRFRSSL+ELR  V ER+E++
Sbjct: 121 GFWWDEAMECMGIEDLKRFRSSLMELRGKVAERVEEL 155

[Close]
BLAST of MELO3C021689.2 vs. TrEMBL
Match: tr|A0A0A0LE01|A0A0A0LE01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 8.5e-52
Identity = 116/212 (54.72%), Postives = 151/212 (71.23%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKK+LGR+KIEIKKL+KKS++QVTFSKRRAGLF KA ELS+LCGAE+A++VFS   K++ 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKR------RAAE 120
           FGHP+VD LLDR+LTGN + PPKPAE+Y+P+AE NRD +    EFE EK+      RAAE
Sbjct: 69  FGHPDVDVLLDRYLTGNLS-PPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAE 128

Query: 121 RSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQ 180
            SR +  FWW E +E ++++ELK FRS+L++LRA V ER+EK+       P +       
Sbjct: 129 DSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPP 188

Query: 181 WPETSSIQLAAGNNHCLP---SFHMAENRSVA 204
            P TSS     GN+  LP   +FH+A N+ VA
Sbjct: 189 QPMTSSSFHLIGNHQELPPPTAFHLAGNQRVA 219

[Close]
BLAST of MELO3C021689.2 vs. TrEMBL
Match: tr|A0A1S3C5V9|A0A1S3C5V9_CUCME (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.1e-51
Identity = 118/158 (74.68%), Postives = 133/158 (84.18%), Query Frame = 0 

Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKS GR+KIEIKKL+ KS +QVTFSKRRAGLFNKAAELSIL GAEIA+LVFSS GKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVD L+DRFLT +N VP KPAEAYLP+ ELNRDL  A AEFEIEK R AER RN+ 
Sbjct: 61  FGHPNVDMLIDRFLT-SNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMR-AERMRNTG 120

Query: 121 RFWWDE-PLESMKIDELKRFRSSLVELRANVVERLEKI 158
            FWWDE  +E M I+ELKRFRSSL+ELR  V E++E++
Sbjct: 121 GFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEEL 156

The following BLAST results are available for this feature:
BLAST of MELO3C021689.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458954.11.2e-113100.00PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo][more]
XP_004139610.11.6e-7370.28PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN65027.1 hyp... [more]
XP_023512238.16.2e-6270.37agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo][more]
XP_022944450.12.3e-6180.50agamous-like MADS-box protein AGL61 [Cucurbita moschata][more]
XP_023513250.12.3e-6180.50agamous-like MADS-box protein AGL61 [Cucurbita pepo subsp. pepo] >XP_023513251.1... [more]
BLAST of MELO3C021689.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G60440.19.2e-2840.63AGAMOUS-like 62[more]
AT2G24840.13.9e-2640.70AGAMOUS-like 61[more]
AT1G65360.12.2e-2150.49AGAMOUS-like 23[more]
AT1G17310.16.4e-2136.92MADS-box transcription factor family protein[more]
AT2G34440.13.5e-1933.33AGAMOUS-like 29[more]
BLAST of MELO3C021689.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FKK2|AGL62_ARATH1.7e-2640.63Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=... [more]
sp|Q4PSU4|AGL61_ARATH7.0e-2540.70Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=... [more]
sp|O80807|AGL23_ARATH4.0e-2050.49Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=... [more]
sp|O64703|AGL29_ARATH6.3e-1833.33Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=... [more]
sp|Q9LMM8|AGL28_ARATH4.1e-1736.47Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=... [more]
BLAST of MELO3C021689.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CAA4|A0A1S3CAA4_CUCME7.8e-114100.00agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103498214 PE=4... [more]
tr|A0A0A0LW53|A0A0A0LW53_CUCSA1.0e-7370.28Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G181400 PE=4 SV=1[more]
tr|A0A0A0LLS2|A0A0A0LLS2_CUCSA2.9e-5273.89Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1[more]
tr|A0A0A0LE01|A0A0A0LE01_CUCSA8.5e-5254.72Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G860240 PE=4 SV=1[more]
tr|A0A1S3C5V9|A0A1S3C5V9_CUCME1.1e-5174.68agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000977RNA polymerase II regulatory region sequence-specific DNA binding
GO:0003677DNA binding
GO:0046983protein dimerization activity
Vocabulary: Biological Process
TermDefinition
GO:0045944positive regulation of transcription from RNA polymerase II promoter
Vocabulary: INTERPRO
TermDefinition
IPR033896MADS_MEF2-like
IPR036879TF_MADSbox_sf
IPR002100TF_MADSbox
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000165 MAPK cascade
biological_process GO:0045944 positive regulation of transcription from RNA polymerase II promoter
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005622 intracellular
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021689.2.1MELO3C021689.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 4..161
NoneNo IPR availablePANTHERPTHR11945:SF164SUBFAMILY NOT NAMEDcoord: 4..161
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 27..42
score: 65.84
coord: 42..63
score: 45.72
coord: 7..27
score: 47.64
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 5..64
e-value: 1.3E-31
score: 121.0
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 16..61
e-value: 4.8E-22
score: 77.1
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 5..65
score: 27.053
IPR036879Transcription factor, MADS-box superfamilyGENE3DG3DSA:3.40.1810.10coord: 17..82
e-value: 6.4E-25
score: 88.4
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILYSSF55455SRF-likecoord: 6..75
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 6..78
e-value: 2.92385E-34
score: 117.653

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C021689.2Lsi02G010990Bottle gourd (USVL1VR-Ls)lsimedB190
MELO3C021689.2Bhi08G000687Wax gourdmedwgoB167
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021689.2Cucumber (Gy14) v2cgybmedB014
MELO3C021689.2Cucurbita maxima (Rimu)cmamedB213
MELO3C021689.2Cucurbita pepo (Zucchini)cpemedB562
MELO3C021689.2Wild cucumber (PI 183967)cpimedB016
MELO3C021689.2Cucumber (Chinese Long) v2cumedB015
MELO3C021689.2Watermelon (Charleston Gray)medwcgB132
MELO3C021689.2Watermelon (97103) v1medwmB166
MELO3C021689.2Silver-seed gourdcarmedB1018
MELO3C021689.2Cucumber (Chinese Long) v3cucmedB014
MELO3C021689.2Watermelon (97103) v2medwmbB131
MELO3C021689.2Wax gourdmedwgoB184