MELO3C021689 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021689
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	MADS-box transcription factor family protein
Location	chr12 : 15624815 .. 15625495 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGCTCAACTCTCTCTTTCAAATTGCAGAACCTTTCCTAACGATGAAGAAATCTTTAGGGCGTCGAAAGATTGAGATCAAAAAGCTCGACAAAAAGAGTACACAGCAGGTTACTTTCTCTAAACGCCGCGCCGGACTTTTCAACAAGGCCGCCGAACTTTCCATTCTCTGCGGCGCTGAGATCGCCGTCCTCGTCTTCTCTTCTCGTGGAAAAATCTATACGTTCGGCCATCCCAATGTCGACGCTCTCCTCGACCGCTTTCTCACCGGAAACAATACTGTTCCGCCCAAGCCGGCGGAGGCCTATCTCCCCATTGCGGAGTTGAATCGCGATTTGTCTAAAGCGGAAGCAGAGTTTGAAATCGAGAAGAGGCGTGCGGCGGAGAGATCGAGGAACAGCGAGCGATTTTGGTGGGATGAGCCGCTGGAAAGTATGAAAATCGACGAGTTGAAGCGATTTCGTTCATCATTGGTGGAATTGAGAGCAAACGTGGTGGAGAGATTAGAGAAAATTGAAGATCGTCACTGTGTAACTCCATCAATAGACATAGCCGAAAGCATCCAATGGCCGGAAACGTCGTCGATTCAGCTTGCCGCCGGAAACAACCATTGTCTGCCGTCGTTTCACATGGCTGAAAATCGGTCAGTGGCGATGGATTGGGAAGCGGAGATTTGGGGTTAG

mRNA sequence

ACGCTCAACTCTCTCTTTCAAATTGCAGAACCTTTCCTAACGATGAAGAAATCTTTAGGGCGTCGAAAGATTGAGATCAAAAAGCTCGACAAAAAGAGTACACAGCAGGTTACTTTCTCTAAACGCCGCGCCGGACTTTTCAACAAGGCCGCCGAACTTTCCATTCTCTGCGGCGCTGAGATCGCCGTCCTCGTCTTCTCTTCTCGTGGAAAAATCTATACGTTCGGCCATCCCAATGTCGACGCTCTCCTCGACCGCTTTCTCACCGGAAACAATACTGTTCCGCCCAAGCCGGCGGAGGCCTATCTCCCCATTGCGGAGTTGAATCGCGATTTGTCTAAAGCGGAAGCAGAGTTTGAAATCGAGAAGAGGCGTGCGGCGGAGAGATCGAGGAACAGCGAGCGATTTTGGTGGGATGAGCCGCTGGAAAGTATGAAAATCGACGAGTTGAAGCGATTTCGTTCATCATTGGTGGAATTGAGAGCAAACGTGGTGGAGAGATTAGAGAAAATTGAAGATCGTCACTGTGTAACTCCATCAATAGACATAGCCGAAAGCATCCAATGGCCGGAAACGTCGTCGATTCAGCTTGCCGCCGGAAACAACCATTGTCTGCCGTCGTTTCACATGGCTGAAAATCGGTCAGTGGCGATGGATTGGGAAGCGGAGATTTGGGGTTAG

Coding sequence (CDS)

ATGAAGAAATCTTTAGGGCGTCGAAAGATTGAGATCAAAAAGCTCGACAAAAAGAGTACACAGCAGGTTACTTTCTCTAAACGCCGCGCCGGACTTTTCAACAAGGCCGCCGAACTTTCCATTCTCTGCGGCGCTGAGATCGCCGTCCTCGTCTTCTCTTCTCGTGGAAAAATCTATACGTTCGGCCATCCCAATGTCGACGCTCTCCTCGACCGCTTTCTCACCGGAAACAATACTGTTCCGCCCAAGCCGGCGGAGGCCTATCTCCCCATTGCGGAGTTGAATCGCGATTTGTCTAAAGCGGAAGCAGAGTTTGAAATCGAGAAGAGGCGTGCGGCGGAGAGATCGAGGAACAGCGAGCGATTTTGGTGGGATGAGCCGCTGGAAAGTATGAAAATCGACGAGTTGAAGCGATTTCGTTCATCATTGGTGGAATTGAGAGCAAACGTGGTGGAGAGATTAGAGAAAATTGAAGATCGTCACTGTGTAACTCCATCAATAGACATAGCCGAAAGCATCCAATGGCCGGAAACGTCGTCGATTCAGCTTGCCGCCGGAAACAACCATTGTCTGCCGTCGTTTCACATGGCTGAAAATCGGTCAGTGGCGATGGATTGGGAAGCGGAGATTTGGGGTTAG

Protein sequence

MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTFGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSSIQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG*

Homology

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BLAST of MELO3C021689 vs. Swiss-Prot
Match: AGL62_ARATH (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-28
Identity = 65/160 (40.62%), Postives = 102/160 (63.75%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           +KKS GR+KIE+ K+  +S  QVTFSKRR+GLF KA+EL  LCGAE+A++VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDALLDRFLTGNNTVPP--------KPAEAYLPIAELNRDLSKAEAEFEIEKRRA 120
           FGHPNVD+++DRF+  NN +PP        +       + +LN  L++  ++ E EK++ 
Sbjct: 62  FGHPNVDSVIDRFI-NNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKY 121

Query: 121 AERSRNSERF-----WWDEPLESMKIDELKRFRSSLVELR 148
            E  +  E+      WW++P+E + + +L+ F+ +L  L+
Sbjct: 122 DELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]

BLAST of MELO3C021689 vs. Swiss-Prot
Match: AGL61_ARATH (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.5e-27
Identity = 70/172 (40.70%), Postives = 103/172 (59.88%), Query Frame = 1


Query: 2   KKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTF 61
           K+S+GR+KI + K+ K+S +QVTFSKRRAGLF KA+EL  LCGAEI ++VFS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDALLDRFLTGNN-------TVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRA-- 121
           GHP+V+++LDR+++ NN        +   PA +     ELN  L+   +E E EK++   
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAAS----CELNMQLTHILSEVEEEKKKGQA 178

Query: 122 -----AERSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIED 160
                 E  R S   WW++P+E M + +L+  + +L ELR  VV  +    +
Sbjct: 179 MEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNE 226

[Close]

BLAST of MELO3C021689 vs. Swiss-Prot
Match: AGL23_ARATH (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana GN=AGL23 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.7e-26
Identity = 63/138 (45.65%), Postives = 88/138 (63.77%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           +KK+LGRRK+EI K+ K+S  QVTFSKR+AGLF KA+E   LC A+IA++VFS  GK+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDALLDRF---LTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSR 120
           FGHPNVD LLD F   + G+N      +   L +  LN+  ++ +AE E E++    R++
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 ------NSERFWWDEPLE 130
                 N+E +W   PLE
Sbjct: 122 NERENENAEEWWSKSPLE 139

[Close]

BLAST of MELO3C021689 vs. Swiss-Prot
Match: AGL28_ARATH (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana GN=AGL28 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.7e-23
Identity = 67/169 (39.64%), Postives = 92/169 (54.44%), Query Frame = 1


Query: 2   KKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTF 61
           +K+LGRRKIE+ K+  +S  QVTFSKRR+GLF K +EL  LC AEIA++VFS  GK Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDALLD----RFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAA---- 121
           GHPNV+ LLD    R +  NNT   + +   L I  LN  L++  AE E E+        
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAE-SRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQ 122

Query: 122 -ERSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRH 162
            ER       WW      + + +    +  L  L+  V E++ ++  R+
Sbjct: 123 NERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQLHHRN 170

[Close]

BLAST of MELO3C021689 vs. Swiss-Prot
Match: AGL29_ARATH (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana GN=AGL29 PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.7e-20
Identity = 56/168 (33.33%), Postives = 95/168 (56.55%), Query Frame = 1


Query: 5   LGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTFGHP 64
           +GRRKI+++ +   +T+QVTFSKRR GLF KA+EL+ LC AE+ ++VFS  GK +++G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 65  NVDALLDRFL---TGNNTVPPKPAEAYLP-IAELNRDLSKAEAEFEIEKRRAAE-----R 124
           N+D++ +RF+     +++   + +  Y P +  L+  L     E E EK R  +      
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 125 SRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCV 164
           S   ERF   E +E++ +DEL  ++  L  +   +  ++  ++   C+
Sbjct: 121 SAGDERF--KESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQASSCL 166

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BLAST of MELO3C021689 vs. TrEMBL
Match: A0A0A0LW53_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181400 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 6.0e-76
Identity = 149/212 (70.28%), Postives = 168/212 (79.25%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKS GRRKIEIK+LDK +T+QVTFSKRR GLFNKAAELS+LCGAEIA+L+FSSRGK+YT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVDALLDRFLTG N +PPKPAEAYLP+ ELN DL KAEAEFEIEK+RA ER RNSE
Sbjct: 61  FGHPNVDALLDRFLTG-NFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSE 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180
           RFWWDE LE M++DELK FRSSL++LRANV  RLEKI       P +  + SI       
Sbjct: 121 RFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSI------- 180

Query: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 213
             +  G N C  SFH+ EN+S AMDWE EIWG
Sbjct: 181 --VLGGENQCAASFHVGENQSFAMDWEEEIWG 202

[Close]

BLAST of MELO3C021689 vs. TrEMBL
Match: A0A0A0LLS2_CUCSA (Mads box protein OS=Cucumis sativus GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 7.6e-55
Identity = 116/157 (73.89%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKSLGR+KIEIKKL+ KS +QVTFSKRRAGLFNKAAELSIL GAEIA+LVFSS  KIYT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVD L+DRFLT +N VPPKP EAYLP+ ELNRDL    AEFE EKRR AER R + 
Sbjct: 61  FGHPNVDFLIDRFLT-SNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRR-AERMRKTG 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKI 158
            FWWDE +E M I++LKRFRSSL+ELR  V ER+E++
Sbjct: 121 GFWWDEAMECMGIEDLKRFRSSLMELRGKVAERVEEL 155

[Close]

BLAST of MELO3C021689 vs. TrEMBL
Match: A0A0A0LE01_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860240 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 5.0e-54
Identity = 116/212 (54.72%), Postives = 151/212 (71.23%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKK+LGR+KIEIKKL+KKS++QVTFSKRRAGLF KA ELS+LCGAE+A++VFS   K++ 
Sbjct: 9   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 68

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKR------RAAE 120
           FGHP+VD LLDR+LTGN + PPKPAE+Y+P+AE NRD +    EFE EK+      RAAE
Sbjct: 69  FGHPDVDVLLDRYLTGNLS-PPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAE 128

Query: 121 RSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQ 180
            SR +  FWW E +E ++++ELK FRS+L++LRA V ER+EK+       P +       
Sbjct: 129 DSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPP 188

Query: 181 WPETSSIQLAAGNNHCLP---SFHMAENRSVA 204
            P TSS     GN+  LP   +FH+A N+ VA
Sbjct: 189 QPMTSSSFHLIGNHQELPPPTAFHLAGNQRVA 219

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BLAST of MELO3C021689 vs. TrEMBL
Match: W9QW40_9ROSA (Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002949 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 7.9e-36
Identity = 80/166 (48.19%), Postives = 113/166 (68.07%), Query Frame = 1


Query: 2   KKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTF 61
           KK+ GR++IEIKKL+  S +QVTFSKRR+GLF KAAELS+LCG+E+A LVFS  GK++TF
Sbjct: 11  KKTQGRQRIEIKKLENGSNKQVTFSKRRSGLFRKAAELSVLCGSEVAALVFSPNGKLFTF 70

Query: 62  GHPNVDALLDRFLTGNNTVPPKPAEAYLPIA-----ELNRDLSKAEAEFEIEKRRAAERS 121
           GHP+VD+++ R+  G NT P   A     +      E NRD  +A  E E EK R AE  
Sbjct: 71  GHPSVDSVVLRYAHGTNTAPAAAASTSTNVVTNVSEEFNRDYVEAVKELEAEKTRLAEEK 130

Query: 122 RNS----ERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIE 159
           + +    E+FWWDE +E M ++EL++  ++L+ELR  V  R++ ++
Sbjct: 131 KKAKIGGEKFWWDEGIEGMGMEELRQHMAALIELRRRVAARVQGLK 176

[Close]

BLAST of MELO3C021689 vs. TrEMBL
Match: A0A022RIX0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020886mg PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.0e-34
Identity = 81/168 (48.21%), Postives = 115/168 (68.45%), Query Frame = 1


Query: 2   KKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTF 61
           KK++GRRKIEIKK++KKS+ QVTFSKRR GLF KA+ELS+LCGAEIA+LV S   KIY++
Sbjct: 13  KKTMGRRKIEIKKIEKKSSLQVTFSKRRIGLFRKASELSVLCGAEIAILVQSPANKIYSY 72

Query: 62  GHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRD-LSKAEAEFEIEKRRAAERSRNSE 121
           GHP+V+ LLDR+ TG        A + +P  E  R    +A  + EI KR   + S +S 
Sbjct: 73  GHPSVETLLDRYQTGGG---GGAASSIIPYREDGRSKYDEAVKKLEIVKRSMKQESNSSS 132

Query: 122 --RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPS 167
             RFWWDEP+E M++ EL+ +  ++  L+ NV+ R++++E +  +  S
Sbjct: 133 NTRFWWDEPMEGMELYELEEYAEAMEALKDNVLRRVDEMEKQKSIAAS 177

[Close]

BLAST of MELO3C021689 vs. TAIR10
Match: AT5G60440.1 (AT5G60440.1 AGAMOUS-like 62)

HSP 1 Score: 128.3 bits (321), Expect = 5.8e-30
Identity = 65/160 (40.62%), Postives = 102/160 (63.75%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           +KKS GR+KIE+ K+  +S  QVTFSKRR+GLF KA+EL  LCGAE+A++VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDALLDRFLTGNNTVPP--------KPAEAYLPIAELNRDLSKAEAEFEIEKRRA 120
           FGHPNVD+++DRF+  NN +PP        +       + +LN  L++  ++ E EK++ 
Sbjct: 62  FGHPNVDSVIDRFI-NNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKY 121

Query: 121 AERSRNSERF-----WWDEPLESMKIDELKRFRSSLVELR 148
            E  +  E+      WW++P+E + + +L+ F+ +L  L+
Sbjct: 122 DELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLK 160

[Close]

BLAST of MELO3C021689 vs. TAIR10
Match: AT2G24840.1 (AT2G24840.1 AGAMOUS-like 61)

HSP 1 Score: 123.6 bits (309), Expect = 1.4e-28
Identity = 70/172 (40.70%), Postives = 103/172 (59.88%), Query Frame = 1


Query: 2   KKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTF 61
           K+S+GR+KI + K+ K+S +QVTFSKRRAGLF KA+EL  LCGAEI ++VFS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDALLDRFLTGNN-------TVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRA-- 121
           GHP+V+++LDR+++ NN        +   PA +     ELN  L+   +E E EK++   
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAAS----CELNMQLTHILSEVEEEKKKGQA 178

Query: 122 -----AERSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIED 160
                 E  R S   WW++P+E M + +L+  + +L ELR  VV  +    +
Sbjct: 179 MEEMRKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTVVTNMASFNE 226

[Close]

BLAST of MELO3C021689 vs. TAIR10
Match: AT1G65360.1 (AT1G65360.1 AGAMOUS-like 23)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-27
Identity = 63/138 (45.65%), Postives = 88/138 (63.77%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           +KK+LGRRK+EI K+ K+S  QVTFSKR+AGLF KA+E   LC A+IA++VFS  GK+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDALLDRF---LTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSR 120
           FGHPNVD LLD F   + G+N      +   L +  LN+  ++ +AE E E++    R++
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 ------NSERFWWDEPLE 130
                 N+E +W   PLE
Sbjct: 122 NERENENAEEWWSKSPLE 139

[Close]

BLAST of MELO3C021689 vs. TAIR10
Match: AT1G01530.1 (AT1G01530.1 AGAMOUS-like 28)

HSP 1 Score: 110.9 bits (276), Expect = 9.6e-25
Identity = 67/169 (39.64%), Postives = 92/169 (54.44%), Query Frame = 1


Query: 2   KKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTF 61
           +K+LGRRKIE+ K+  +S  QVTFSKRR+GLF K +EL  LC AEIA++VFS  GK Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDALLD----RFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAA---- 121
           GHPNV+ LLD    R +  NNT   + +   L I  LN  L++  AE E E+        
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAE-SRTKLRIQMLNESLTEVMAEKEKEQETKQSIVQ 122

Query: 122 -ERSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRH 162
            ER       WW      + + +    +  L  L+  V E++ ++  R+
Sbjct: 123 NERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQLHHRN 170

[Close]

BLAST of MELO3C021689 vs. TAIR10
Match: AT1G17310.1 (AT1G17310.1 MADS-box transcription factor family protein)

HSP 1 Score: 104.4 bits (259), Expect = 9.0e-23
Identity = 72/195 (36.92%), Postives = 106/195 (54.36%), Query Frame = 1


Query: 2   KKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYTF 61
           K + GR+KIEIKK+++++ +QVTFSKRR GLF K+AELS+L GA+IAV+ FS   +IY F
Sbjct: 44  KTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRF 103

Query: 62  GHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSER 121
           GH  VDAL+D++L  +    P   E Y                       AA+    S R
Sbjct: 104 GH--VDALIDKYLRKS----PVKLEGY-------------------SGDNAADE--ESRR 163

Query: 122 FWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCV--TPSIDIAESIQWPETS 181
            WW+ P+ES+  +EL+ + ++L  LR N+ +++  + +   V   P+  I   + W  T 
Sbjct: 164 PWWERPVESVPEEELEEYMAALSMLRENIGKKIVAMGNDRTVDMVPAWPI-NVMGWKPTM 210

Query: 182 SIQ----LAAGNNHC 191
            +Q    L  G N C
Sbjct: 224 DMQKLENLTDGVNRC 210

[Close]

BLAST of MELO3C021689 vs. NCBI nr
Match: gi|659118116|ref|XP_008458954.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 424.9 bits (1091), Expect = 8.5e-116
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT
Sbjct: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE
Sbjct: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180
           RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS
Sbjct: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180

Query: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 213
           IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG
Sbjct: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 212

[Close]

BLAST of MELO3C021689 vs. NCBI nr
Match: gi|449443690|ref|XP_004139610.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 292.0 bits (746), Expect = 8.6e-76
Identity = 149/212 (70.28%), Postives = 168/212 (79.25%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKS GRRKIEIK+LDK +T+QVTFSKRR GLFNKAAELS+LCGAEIA+L+FSSRGK+YT
Sbjct: 1   MKKSSGRRKIEIKRLDKNTTRQVTFSKRRVGLFNKAAELSLLCGAEIAILLFSSRGKVYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVDALLDRFLTG N +PPKPAEAYLP+ ELN DL KAEAEFEIEK+RA ER RNSE
Sbjct: 61  FGHPNVDALLDRFLTG-NFLPPKPAEAYLPLPELNLDLCKAEAEFEIEKKRAVERLRNSE 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQWPETSS 180
           RFWWDE LE M++DELK FRSSL++LRANV  RLEKI       P +  + SI       
Sbjct: 121 RFWWDEALERMRMDELKSFRSSLLQLRANVAGRLEKIRAMRMEDPPVTPSWSI------- 180

Query: 181 IQLAAGNNHCLPSFHMAENRSVAMDWEAEIWG 213
             +  G N C  SFH+ EN+S AMDWE EIWG
Sbjct: 181 --VLGGENQCAASFHVGENQSFAMDWEEEIWG 202

[Close]

BLAST of MELO3C021689 vs. NCBI nr
Match: gi|449463992|ref|XP_004149713.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 221.9 bits (564), Expect = 1.1e-54
Identity = 116/157 (73.89%), Postives = 131/157 (83.44%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKSLGR+KIEIKKL+ KS +QVTFSKRRAGLFNKAAELSIL GAEIA+LVFSS  KIYT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVD L+DRFLT +N VPPKP EAYLP+ ELNRDL    AEFE EKRR AER R + 
Sbjct: 61  FGHPNVDFLIDRFLT-SNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRR-AERMRKTG 120

Query: 121 RFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKI 158
            FWWDE +E M I++LKRFRSSL+ELR  V ER+E++
Sbjct: 121 GFWWDEAMECMGIEDLKRFRSSLMELRGKVAERVEEL 155

[Close]

BLAST of MELO3C021689 vs. NCBI nr
Match: gi|659115872|ref|XP_008457781.1| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo])

HSP 1 Score: 219.9 bits (559), Expect = 4.2e-54
Identity = 118/158 (74.68%), Postives = 133/158 (84.18%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKKS GR+KIEIKKL+ KS +QVTFSKRRAGLFNKAAELSIL GAEIA+LVFSS GKIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKRRAAERSRNSE 120
           FGHPNVD L+DRFLT +N VP KPAEAYLP+ ELNRDL  A AEFEIEK R AER RN+ 
Sbjct: 61  FGHPNVDMLIDRFLT-SNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMR-AERMRNTG 120

Query: 121 RFWWDE-PLESMKIDELKRFRSSLVELRANVVERLEKI 158
            FWWDE  +E M I+ELKRFRSSL+ELR  V E++E++
Sbjct: 121 GFWWDETEMECMGIEELKRFRSSLMELRGKVAEKVEEL 156

[Close]

BLAST of MELO3C021689 vs. NCBI nr
Match: gi|778686644|ref|XP_004147877.2| (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus])

HSP 1 Score: 219.2 bits (557), Expect = 7.1e-54
Identity = 116/212 (54.72%), Postives = 151/212 (71.23%), Query Frame = 1


Query: 1   MKKSLGRRKIEIKKLDKKSTQQVTFSKRRAGLFNKAAELSILCGAEIAVLVFSSRGKIYT 60
           MKK+LGR+KIEIKKL+KKS++QVTFSKRRAGLF KA ELS+LCGAE+A++VFS   K++ 
Sbjct: 1   MKKTLGRQKIEIKKLEKKSSKQVTFSKRRAGLFKKAGELSVLCGAEVAIIVFSPNDKLFC 60

Query: 61  FGHPNVDALLDRFLTGNNTVPPKPAEAYLPIAELNRDLSKAEAEFEIEKR------RAAE 120
           FGHP+VD LLDR+LTGN + PPKPAE+Y+P+AE NRD +    EFE EK+      RAAE
Sbjct: 61  FGHPDVDVLLDRYLTGNLS-PPKPAESYIPVAEFNRDFADCALEFEAEKKRAAELIRAAE 120

Query: 121 RSRNSERFWWDEPLESMKIDELKRFRSSLVELRANVVERLEKIEDRHCVTPSIDIAESIQ 180
            SR +  FWW E +E ++++ELK FRS+L++LRA V ER+EK+       P +       
Sbjct: 121 DSRKNGGFWWQEAVEGLRLEELKDFRSALMDLRAKVAERVEKLTAVRIGGPLLPALPPPP 180

Query: 181 WPETSSIQLAAGNNHCLP---SFHMAENRSVA 204
            P TSS     GN+  LP   +FH+A N+ VA
Sbjct: 181 QPMTSSSFHLIGNHQELPPPTAFHLAGNQRVA 211

The following BLAST results are available for this feature:

BLAST of MELO3C021689 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGL62_ARATH	1.0e-28	40.63	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana GN=AGL62 PE=1 SV=1	[more]
AGL61_ARATH	2.5e-27	40.70	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana GN=AGL61 PE=1 SV=1	[more]
AGL23_ARATH	3.7e-26	45.65	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana GN=AGL23 PE=2 SV=1	[more]
AGL28_ARATH	1.7e-23	39.64	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana GN=AGL28 PE=2 SV=1	[more]
AGL29_ARATH	6.7e-20	33.33	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana GN=AGL29 PE=2 SV=1	[more]

BLAST of MELO3C021689 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LW53_CUCSA	6.0e-76	70.28	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G181400 PE=4 SV=1	[more]
A0A0A0LLS2_CUCSA	7.6e-55	73.89	Mads box protein OS=Cucumis sativus GN=Csa_2G277060 PE=4 SV=1	[more]
A0A0A0LE01_CUCSA	5.0e-54	54.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860240 PE=4 SV=1	[more]
W9QW40_9ROSA	7.9e-36	48.19	Agamous-like MADS-box protein AGL62 OS=Morus notabilis GN=L484_002949 PE=4 SV=1	[more]
A0A022RIX0_ERYGU	2.0e-34	48.21	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a020886mg PE=4 SV=1	[more]

BLAST of MELO3C021689 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G60440.1	5.8e-30	40.63	AGAMOUS-like 62	[more]
AT2G24840.1	1.4e-28	40.70	AGAMOUS-like 61	[more]
AT1G65360.1	2.1e-27	45.65	AGAMOUS-like 23	[more]
AT1G01530.1	9.6e-25	39.64	AGAMOUS-like 28	[more]
AT1G17310.1	9.0e-23	36.92	MADS-box transcription factor family protein	[more]

BLAST of MELO3C021689 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118116\|ref\|XP_008458954.1\|	8.5e-116	100.00	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]	[more]
gi\|449443690\|ref\|XP_004139610.1\|	8.6e-76	70.28	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus]	[more]
gi\|449463992\|ref\|XP_004149713.1\|	1.1e-54	73.89	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus]	[more]
gi\|659115872\|ref\|XP_008457781.1\|	4.2e-54	74.68	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo]	[more]
gi\|778686644\|ref\|XP_004147877.2\|	7.1e-54	54.72	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002100	TF_MADSbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0046983	protein dimerization activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021689T1	MELO3C021689T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 27..42 score: 1.2E-21coord: 42..63 score: 1.2E-21coord: 7..27 score: 1.2
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 16..61 score: 4.3
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 score: 1.3
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 5..65 score: 27
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 6..75 score: 4.97
None	No IPR available	unknown	Coil	Coil	coord: 91..111 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 6..157 score: 8.5
None	No IPR available	PANTHER	PTHR11945:SF164	SUBFAMILY NOT NAMED	coord: 6..157 score: 8.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C021689	Bhi08G000687	Wax gourd	mewgoB164
MELO3C021689	Lsi02G010990	Bottle gourd (USVL1VR-Ls)	lsimeB180

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021689	Watermelon (97103) v2	mewmbB139
MELO3C021689	Watermelon (97103) v2	mewmbB141
MELO3C021689	Wax gourd	mewgoB180
MELO3C021689	Cucumber (Gy14) v1	cgymeB018
MELO3C021689	Cucurbita maxima (Rimu)	cmameB192
MELO3C021689	Wild cucumber (PI 183967)	cpimeB018
MELO3C021689	Wild cucumber (PI 183967)	cpimeB451
MELO3C021689	Cucumber (Chinese Long) v2	cumeB020
MELO3C021689	Watermelon (Charleston Gray)	mewcgB136
MELO3C021689	Watermelon (Charleston Gray)	mewcgB140
MELO3C021689	Watermelon (97103) v1	mewmB165
MELO3C021689	Watermelon (97103) v1	mewmB170
MELO3C021689	Cucurbita pepo (Zucchini)	cpemeB477
MELO3C021689	Bottle gourd (USVL1VR-Ls)	lsimeB129
MELO3C021689	Cucumber (Gy14) v2	cgybmeB017
MELO3C021689	Cucumber (Gy14) v2	cgybmeB396
MELO3C021689	Silver-seed gourd	carmeB1005
MELO3C021689	Cucumber (Chinese Long) v3	cucmeB017