MELO3C021574 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021574
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Cytochrome c oxidase subunit 1
Location	chr9 : 3977744 .. 3978094 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATTTGTTGTAGGGTCCATATTTTTGTTCACAATAGGAGAACTCATTAGAATAGTCCCGACAAATTCAGGGCTAAGCATTGCTCTACATGATACCTATTTTGTGGTTGCACATTTCCATTATGTACTTTCTATAGGAGTCGTGATGATTTTTTGCTTTAATTGCAGGATTTCACTATTGGGTGGGTAAATCTTTTGTCCGATATACCCTGAAACTTTAGGTCAAATCCATTTTTGGATCACTTTTTTCAGGGTTAATCCGACCCTCTTTCCCATGCACTTCTTAGGTCTTTTGGGTATGCCACGTCGCATTCCTGATTATCTAGATGCTTACGCTGATGATGGATGA

mRNA sequence

ATGTTATTTGTTGTAGGGTCCATATTTTTGTTCACAATAGGAGAACTCATTAGAATAGTCCCGACAAATTCAGGGCTAAGCATTGCTCTACATGATACCTATTTTGTGGTTGCACATTTCCATTATGTACTTTCTATAGGAGTCGTGATGATTTTTTGCTTTAATTGCAGGATTTCACTATTGGGTCAAATCCATTTTTGGATCACTTTTTTCAGGGTTAATCCGACCCTCTTTCCCATGCACTTCTTAGGTCTTTTGGGTATGCCACGTCGCATTCCTGATTATCTAGATGCTTACGCTGATGATGGATGA

Coding sequence (CDS)

ATGTTATTTGTTGTAGGGTCCATATTTTTGTTCACAATAGGAGAACTCATTAGAATAGTCCCGACAAATTCAGGGCTAAGCATTGCTCTACATGATACCTATTTTGTGGTTGCACATTTCCATTATGTACTTTCTATAGGAGTCGTGATGATTTTTTGCTTTAATTGCAGGATTTCACTATTGGGTCAAATCCATTTTTGGATCACTTTTTTCAGGGTTAATCCGACCCTCTTTCCCATGCACTTCTTAGGTCTTTTGGGTATGCCACGTCGCATTCCTGATTATCTAGATGCTTACGCTGATGATGGATGA

Protein sequence

MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRISLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYADDG*

Homology

[Close]

BLAST of MELO3C021574 vs. Swiss-Prot
Match: COX1_PEA (Cytochrome c oxidase subunit 1 OS=Pisum sativum GN=COX1 PE=3 SV=2)

HSP 1 Score: 141.4 bits (355), Expect = 5.8e-33
Identity = 74/111 (66.67%), Postives = 75/111 (67.57%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VG IFLFTIG L  IVP NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 340 MLFAVGFIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 399

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LG+IHFWITFF VN TLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 400 GKIFGRTYPETLGKIHFWITFFGVNLTLFPMHFLGLSGMPRRIPDYPDAYA 450

[Close]

BLAST of MELO3C021574 vs. Swiss-Prot
Match: COX1_OENBE (Cytochrome c oxidase subunit 1 OS=Oenothera berteroana GN=COX1 PE=3 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 2.2e-32
Identity = 71/111 (63.96%), Postives = 74/111 (66.67%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VGSIFLFT+G L  IVP NSGL IALHDTY+  AHFHYVLS+G V       R   
Sbjct: 340 MLFAVGSIFLFTVGGLAGIVPANSGLDIALHDTYYAGAHFHYVLSMGAVFALFAGFRYWV 399

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VNPT FPMHFLGL GMPR IPDY ++YA
Sbjct: 400 GKIFGRTYPETLGQIHFWITFFGVNPTFFPMHFLGLSGMPRPIPDYPESYA 450

[Close]

BLAST of MELO3C021574 vs. Swiss-Prot
Match: COX1_SOYBN (Cytochrome c oxidase subunit 1 OS=Glycine max GN=COX1 PE=3 SV=3)

HSP 1 Score: 139.0 bits (349), Expect = 2.9e-32
Identity = 74/111 (66.67%), Postives = 74/111 (66.67%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VG IFLFTIG L  IV  NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 340 MLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 399

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VN TLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 400 GKIFGRTYPETLGQIHFWITFFGVNLTLFPMHFLGLSGMPRRIPDYPDAYA 450

[Close]

BLAST of MELO3C021574 vs. Swiss-Prot
Match: COX1_ORYSJ (Cytochrome c oxidase subunit 1 OS=Oryza sativa subsp. japonica GN=COX1 PE=3 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-31
Identity = 74/111 (66.67%), Postives = 77/111 (69.37%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVM-----IFCFN 60
           MLF VG IFLFTIG L  IV  NSGL IALHDTY+VVAHFHYVLS+G V       + + 
Sbjct: 340 MLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWV 399

Query: 61  CRI------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
            +I        LGQIHFWITFF VN T FPMHFLGL GMPRRIPDY DAYA
Sbjct: 400 GKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYA 450

[Close]

BLAST of MELO3C021574 vs. Swiss-Prot
Match: COX1_MAIZE (Cytochrome c oxidase subunit 1 OS=Zea mays GN=COX1 PE=3 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-31
Identity = 74/111 (66.67%), Postives = 77/111 (69.37%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVM-----IFCFN 60
           MLF VG IFLFTIG L  IV  NSGL IALHDTY+VVAHFHYVLS+G V       + + 
Sbjct: 340 MLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWV 399

Query: 61  CRI------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
            +I        LGQIHFWITFF VN T FPMHFLGL GMPRRIPDY DAYA
Sbjct: 400 GKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYA 450

[Close]

BLAST of MELO3C021574 vs. TrEMBL
Match: G3EIX2_CUCSA (Cytochrome c oxidase subunit 1 OS=Cucumis sativus GN=cox1 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-33
Identity = 77/111 (69.37%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VGSIFLFTIG L  IVP NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 340 MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 399

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VNPTLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 400 GKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYA 450

[Close]

BLAST of MELO3C021574 vs. TrEMBL
Match: B4XPH1_CUCME (Cytochrome c oxidase subunit 1 (Fragment) OS=Cucumis melo GN=cox1 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-33
Identity = 77/111 (69.37%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VGSIFLFTIG L  IVP NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 319 MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 378

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VNPTLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 379 GKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYA 429

[Close]

BLAST of MELO3C021574 vs. TrEMBL
Match: B4XPH5_9ROSI (Cytochrome c oxidase subunit 1 (Fragment) OS=Neoachmandra indica GN=cox1 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-33
Identity = 77/111 (69.37%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VGSIFLFTIG L  IVP NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 338 MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 397

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VNPTLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 398 GKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYA 448

[Close]

BLAST of MELO3C021574 vs. TrEMBL
Match: G3EU24_CUCME (Cytochrome c oxidase subunit 1 OS=Cucumis melo subsp. melo GN=cox1 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-33
Identity = 77/111 (69.37%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VGSIFLFTIG L  IVP NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 341 MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 400

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VNPTLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 401 GKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYA 451

[Close]

BLAST of MELO3C021574 vs. TrEMBL
Match: B4XPH3_9ROSI (Cytochrome c oxidase subunit 1 (Fragment) OS=Cucumis metulifer GN=cox1 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 3.1e-33
Identity = 77/111 (69.37%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VGSIFLFTIG L  IVP NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 322 MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 381

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VNPTLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 382 GKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYA 432

[Close]

BLAST of MELO3C021574 vs. TAIR10
Match: ATMG01360.1 (ATMG01360.1 cytochrome oxidase)

HSP 1 Score: 137.1 bits (344), Expect = 6.1e-33
Identity = 74/111 (66.67%), Postives = 77/111 (69.37%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVM-----IFCFN 60
           MLF VG IFLFTIG L  IV  NSGL IALHDTY+VVAHFHYVLS+G V       + + 
Sbjct: 340 MLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWV 399

Query: 61  CRI------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
            +I        LGQIHFWITFF VN T FPMHFLGL GMPRRIPDY DAYA
Sbjct: 400 GKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPDAYA 450

[Close]

BLAST of MELO3C021574 vs. NCBI nr
Match: gi|166165030|gb|ABY83868.1| (cytochrome oxidase subunit 1, partial (mitochondrion) [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 149.1 bits (375), Expect = 4.4e-33
Identity = 77/111 (69.37%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VGSIFLFTIG L  IVP NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 320 MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 379

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VNPTLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 380 GKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYA 430

[Close]

BLAST of MELO3C021574 vs. NCBI nr
Match: gi|164685362|gb|ABY66627.1| (cytochrome oxidase subunit I, partial (mitochondrion) [Echinocystis lobata])

HSP 1 Score: 149.1 bits (375), Expect = 4.4e-33
Identity = 77/111 (69.37%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VGSIFLFTIG L  IVP NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 305 MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 364

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VNPTLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 365 GKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYA 415

[Close]

BLAST of MELO3C021574 vs. NCBI nr
Match: gi|346683358|ref|YP_004849320.1| (cytochrome c oxidase subunit 1 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 4.4e-33
Identity = 77/111 (69.37%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VGSIFLFTIG L  IVP NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 340 MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 399

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VNPTLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 400 GKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYA 450

[Close]

BLAST of MELO3C021574 vs. NCBI nr
Match: gi|166165033|gb|ABY83870.1| (cytochrome oxidase subunit 1, partial (mitochondrion) [Cucumis melo])

HSP 1 Score: 149.1 bits (375), Expect = 4.4e-33
Identity = 77/111 (69.37%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VGSIFLFTIG L  IVP NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 319 MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 378

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VNPTLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 379 GKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYA 429

[Close]

BLAST of MELO3C021574 vs. NCBI nr
Match: gi|3288134|emb|CAA11318.1| (cytochrome c oxidase subunit I [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 4.4e-33
Identity = 77/111 (69.37%), Postives = 79/111 (71.17%), Query Frame = 1


Query: 1   MLFVVGSIFLFTIGELIRIVPTNSGLSIALHDTYFVVAHFHYVLSIGVVMIFCFNCRI-- 60
           MLF VGSIFLFTIG L  IVP NSGL IALHDTY+VVAHFHYVLS+G V           
Sbjct: 284 MLFAVGSIFLFTIGGLTGIVPANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHYWV 343

Query: 61  ---------SLLGQIHFWITFFRVNPTLFPMHFLGLLGMPRRIPDYLDAYA 101
                      LGQIHFWITFF VNPTLFPMHFLGL GMPRRIPDY DAYA
Sbjct: 344 GKIFGRTYPETLGQIHFWITFFGVNPTLFPMHFLGLSGMPRRIPDYPDAYA 394

The following BLAST results are available for this feature:

BLAST of MELO3C021574 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COX1_PEA	5.8e-33	66.67	Cytochrome c oxidase subunit 1 OS=Pisum sativum GN=COX1 PE=3 SV=2	[more]
COX1_OENBE	2.2e-32	63.96	Cytochrome c oxidase subunit 1 OS=Oenothera berteroana GN=COX1 PE=3 SV=2	[more]
COX1_SOYBN	2.9e-32	66.67	Cytochrome c oxidase subunit 1 OS=Glycine max GN=COX1 PE=3 SV=3	[more]
COX1_ORYSJ	1.1e-31	66.67	Cytochrome c oxidase subunit 1 OS=Oryza sativa subsp. japonica GN=COX1 PE=3 SV=2	[more]
COX1_MAIZE	1.1e-31	66.67	Cytochrome c oxidase subunit 1 OS=Zea mays GN=COX1 PE=3 SV=2	[more]

BLAST of MELO3C021574 vs. TrEMBL


Match Name	E-value	Identity	Description
G3EIX2_CUCSA	3.1e-33	69.37	Cytochrome c oxidase subunit 1 OS=Cucumis sativus GN=cox1 PE=3 SV=1	[more]
B4XPH1_CUCME	3.1e-33	69.37	Cytochrome c oxidase subunit 1 (Fragment) OS=Cucumis melo GN=cox1 PE=3 SV=1	[more]
B4XPH5_9ROSI	3.1e-33	69.37	Cytochrome c oxidase subunit 1 (Fragment) OS=Neoachmandra indica GN=cox1 PE=3 SV...	[more]
G3EU24_CUCME	3.1e-33	69.37	Cytochrome c oxidase subunit 1 OS=Cucumis melo subsp. melo GN=cox1 PE=3 SV=1	[more]
B4XPH3_9ROSI	3.1e-33	69.37	Cytochrome c oxidase subunit 1 (Fragment) OS=Cucumis metulifer GN=cox1 PE=3 SV=1	[more]

BLAST of MELO3C021574 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG01360.1	6.1e-33	66.67	ATMG01360.1 cytochrome oxidase	[more]

BLAST of MELO3C021574 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|166165030\|gb\|ABY83868.1\|	4.4e-33	69.37	cytochrome oxidase subunit 1, partial (mitochondrion) [Citrullus lanatus subsp. ...	[more]
gi\|164685362\|gb\|ABY66627.1\|	4.4e-33	69.37	cytochrome oxidase subunit I, partial (mitochondrion) [Echinocystis lobata]	[more]
gi\|346683358\|ref\|YP_004849320.1\|	4.4e-33	69.37	cytochrome c oxidase subunit 1 [Cucumis sativus]	[more]
gi\|166165033\|gb\|ABY83870.1\|	4.4e-33	69.37	cytochrome oxidase subunit 1, partial (mitochondrion) [Cucumis melo]	[more]
gi\|3288134\|emb\|CAA11318.1\|	4.4e-33	69.37	cytochrome c oxidase subunit I [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000883	Cyt_C_Oxase_1
IPR023616	Cyt_c_oxase-like_su1_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004129	cytochrome-c oxidase activity
GO:0005506	iron ion binding
GO:0009055	electron carrier activity
GO:0020037	heme binding

Vocabulary: **Biological Process**
Term	Definition
GO:0009060	aerobic respiration
GO:0055114	oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
biological_process	GO:0015992	proton transport
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0045277	respiratory chain complex IV
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021574T1	MELO3C021574T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000883	Cytochrome c oxidase subunit I	PRINTS	PR01165	CYCOXIDASEI	coord: 31..50 score: 1.6E-12coord: 3..21 score: 1.6
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..100 score: 3.6
IPR000883	Cytochrome c oxidase subunit I	PFAM	PF00115	COX1	coord: 1..97 score: 1.7
IPR023616	Cytochrome c oxidase, subunit I domain	GENE3D	G3DSA:1.20.210.10		coord: 1..100 score: 1.0
IPR023616	Cytochrome c oxidase, subunit I domain	PROFILE	PS50855	COX1	coord: 1..103 score: 17
IPR023616	Cytochrome c oxidase, subunit I domain	unknown	SSF81442	Cytochrome c oxidase subunit I-like	coord: 1..99 score: 8.11
None	No IPR available	PANTHER	PTHR10422:SF18	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..100 score: 3.6

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021574	Silver-seed gourd	carmeB0260
MELO3C021574	Silver-seed gourd	carmeB0370
MELO3C021574	Silver-seed gourd	carmeB0441
MELO3C021574	Silver-seed gourd	carmeB0682
MELO3C021574	Wax gourd	mewgoB022
MELO3C021574	Cucumber (Chinese Long) v3	cucmeB000
MELO3C021574	Cucumber (Chinese Long) v3	cucmeB164
MELO3C021574	Cucumber (Chinese Long) v3	cucmeB359
MELO3C021574	Watermelon (97103) v2	mewmbB013
MELO3C021574	Watermelon (97103) v2	mewmbB038
MELO3C021574	Wax gourd	mewgoB002
MELO3C021574	Wax gourd	mewgoB044
MELO3C021574	Melon (DHL92) v3.5.1	memeB012
MELO3C021574	Melon (DHL92) v3.5.1	memeB013
MELO3C021574	Cucumber (Gy14) v1	cgymeB114
MELO3C021574	Cucumber (Gy14) v1	cgymeB336
MELO3C021574	Cucumber (Gy14) v1	cgymeB549
MELO3C021574	Cucurbita maxima (Rimu)	cmameB081
MELO3C021574	Cucurbita maxima (Rimu)	cmameB212
MELO3C021574	Cucurbita maxima (Rimu)	cmameB251
MELO3C021574	Cucurbita maxima (Rimu)	cmameB634
MELO3C021574	Cucurbita moschata (Rifu)	cmomeB075
MELO3C021574	Cucurbita moschata (Rifu)	cmomeB196
MELO3C021574	Cucurbita moschata (Rifu)	cmomeB239
MELO3C021574	Cucurbita moschata (Rifu)	cmomeB624
MELO3C021574	Wild cucumber (PI 183967)	cpimeB000
MELO3C021574	Wild cucumber (PI 183967)	cpimeB162
MELO3C021574	Wild cucumber (PI 183967)	cpimeB350
MELO3C021574	Cucumber (Chinese Long) v2	cumeB005
MELO3C021574	Cucumber (Chinese Long) v2	cumeB172
MELO3C021574	Cucumber (Chinese Long) v2	cumeB360
MELO3C021574	Watermelon (Charleston Gray)	mewcgB002
MELO3C021574	Watermelon (Charleston Gray)	mewcgB006
MELO3C021574	Watermelon (Charleston Gray)	mewcgB017
MELO3C021574	Watermelon (97103) v1	mewmB003
MELO3C021574	Watermelon (97103) v1	mewmB007
MELO3C021574	Cucurbita pepo (Zucchini)	cpemeB155
MELO3C021574	Cucurbita pepo (Zucchini)	cpemeB358
MELO3C021574	Cucurbita pepo (Zucchini)	cpemeB467
MELO3C021574	Cucurbita pepo (Zucchini)	cpemeB550
MELO3C021574	Cucurbita pepo (Zucchini)	cpemeB594
MELO3C021574	Bottle gourd (USVL1VR-Ls)	lsimeB162
MELO3C021574	Bottle gourd (USVL1VR-Ls)	lsimeB163
MELO3C021574	Bottle gourd (USVL1VR-Ls)	lsimeB234
MELO3C021574	Cucumber (Gy14) v2	cgybmeB001
MELO3C021574	Cucumber (Gy14) v2	cgybmeB140
MELO3C021574	Cucumber (Gy14) v2	cgybmeB300