MELO3C021559 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021559
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionOrotidine 5'-phosphate decarboxylase
Locationchr9 : 3719456 .. 3719859 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCCCTACACCAAAAAACGTCGAAGAACGCCTCTACCGAAGAACCCCTCCGTCGAATCTTCATCGCCGAATCAAGGGGTTGTATTATACAAAATTGAAGAGAATTGAAACAGGGCTAAGAAGAGCAAGAGCCGACATTAGAGAAGCTAAGTTCCTTAATCAAACACAAAATCCTGACTTCGTTCCTTCTAGTCCAATCTATTGGAATTCTAAAGCATTTCACAGGTTAAATTTCAATTTTTTGTTTCTTAATTTTGTTCACAAGTTATGAACTTTTGAATTTGTTTTTCTTTCTAACAATACTGTATATAACGTGGATTAAAAATTGTTGACCAAAATTTGATTATGATGCAACTTATTTTGTTTTTTTTATGACACAGGATGACAAGTGTTAAGGGGTGA

mRNA sequence

ATGACCCCTACACCAAAAAACGTCGAAGAACGCCTCTACCGAAGAACCCCTCCGTCGAATCTTCATCGCCGAATCAAGGGGTTGTATTATACAAAATTGAAGAGAATTGAAACAGGGCTAAGAAGAGCAAGAGCCGACATTAGAGAAGCTAAGTTCCTTAATCAAACACAAAATCCTGACTTCGTTCCTTCTAGTCCAATCTATTGGAATTCTAAAGCATTTCACAGGATGACAAGTGTTAAGGGGTGA

Coding sequence (CDS)

ATGACCCCTACACCAAAAAACGTCGAAGAACGCCTCTACCGAAGAACCCCTCCGTCGAATCTTCATCGCCGAATCAAGGGGTTGTATTATACAAAATTGAAGAGAATTGAAACAGGGCTAAGAAGAGCAAGAGCCGACATTAGAGAAGCTAAGTTCCTTAATCAAACACAAAATCCTGACTTCGTTCCTTCTAGTCCAATCTATTGGAATTCTAAAGCATTTCACAGGATGACAAGTGTTAAGGGGTGA

Protein sequence

MTPTPKNVEERLYRRTPPSNLHRRIKGLYYTKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHRMTSVKG*
Homology
[Close]
BLAST of MELO3C021559 vs. Swiss-Prot
Match: GLYT3_ARATH (Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 6.2e-06
Identity = 21/46 (45.65%), Postives = 31/46 (67.39%), Query Frame = 1 

Query: 31  TKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHR 77
           + L++IE  L++ARA I+ A   +   +PD+VP  P+YWN+K FHR
Sbjct: 136 SNLEKIEFKLQKARASIKAASMDDPVDDPDYVPLGPMYWNAKVFHR 181

[Close]
BLAST of MELO3C021559 vs. TrEMBL
Match: A0A0A0KKC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G449280 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 2.3e-15
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 1 

Query: 30  YTKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHR 77
           YTKL+RIE GLRRARA IREAKFLNQTQ+PDFVPS P+YWNSKAFHR
Sbjct: 135 YTKLERIEAGLRRARAAIREAKFLNQTQDPDFVPSGPMYWNSKAFHR 181

[Close]
BLAST of MELO3C021559 vs. TrEMBL
Match: A5ADS4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016428 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.9e-10
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 1 

Query: 30  YTKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHRMTS 80
           YT L+R+E GLRRAR+ IREAK  N+T +PD++P+ PIYWN  AFHR  S
Sbjct: 159 YTTLERVEAGLRRARSAIREAKIGNRTPDPDYIPNGPIYWNXNAFHRQAS 208

[Close]
BLAST of MELO3C021559 vs. TrEMBL
Match: A0A067F4D6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048582mg PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.2e-09
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 1 

Query: 31  TKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHR 77
           TKL+++E GL+RAR  I+EA   NQTQ+PDFVP  P+YW+SKAFHR
Sbjct: 167 TKLEKLEAGLQRARVAIKEASIGNQTQDPDFVPLGPMYWDSKAFHR 212

[Close]
BLAST of MELO3C021559 vs. TrEMBL
Match: V4S7X8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011407mg PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 3.2e-09
Identity = 30/46 (65.22%), Postives = 38/46 (82.61%), Query Frame = 1 

Query: 31  TKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHR 77
           TKL+++E GL+RAR  I+EA   NQTQ+PDFVP  P+YW+SKAFHR
Sbjct: 164 TKLEKLEAGLQRARVAIKEASIGNQTQDPDFVPLGPMYWDSKAFHR 209

[Close]
BLAST of MELO3C021559 vs. TrEMBL
Match: B9SRL1_RICCO (Catalytic, putative OS=Ricinus communis GN=RCOM_0840140 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 2.1e-08
Identity = 28/47 (59.57%), Postives = 38/47 (80.85%), Query Frame = 1 

Query: 30  YTKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHR 77
           +T L+R+E GL+ ARA I+EAK  NQT++P++VP  P+YWNSK FHR
Sbjct: 185 FTNLERLEAGLQNARAAIKEAKNGNQTEDPEYVPIGPMYWNSKVFHR 231

[Close]
BLAST of MELO3C021559 vs. TAIR10
Match: AT5G03795.1 (AT5G03795.1 Exostosin family protein)

HSP 1 Score: 51.2 bits (121), Expect = 3.5e-07
Identity = 21/46 (45.65%), Postives = 31/46 (67.39%), Query Frame = 1 

Query: 31  TKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHR 77
           + L++IE  L++ARA I+ A   +   +PD+VP  P+YWN+K FHR
Sbjct: 136 SNLEKIEFKLQKARASIKAASMDDPVDDPDYVPLGPMYWNAKVFHR 181

[Close]
BLAST of MELO3C021559 vs. NCBI nr
Match: gi|659125122|ref|XP_008462519.1| (PREDICTED: probable glycosyltransferase At5g03795 [Cucumis melo])

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-15
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 1 

Query: 30  YTKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHR 77
           YTKL+RIE GLRRARA IREAKFLNQTQ+PDFVPS P+YWNSKAFHR
Sbjct: 136 YTKLERIEAGLRRARAAIREAKFLNQTQDPDFVPSGPMYWNSKAFHR 182

[Close]
BLAST of MELO3C021559 vs. NCBI nr
Match: gi|449451243|ref|XP_004143371.1| (PREDICTED: probable glycosyltransferase At5g03795 [Cucumis sativus])

HSP 1 Score: 89.4 bits (220), Expect = 3.3e-15
Identity = 41/47 (87.23%), Postives = 44/47 (93.62%), Query Frame = 1 

Query: 30  YTKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHR 77
           YTKL+RIE GLRRARA IREAKFLNQTQ+PDFVPS P+YWNSKAFHR
Sbjct: 135 YTKLERIEAGLRRARAAIREAKFLNQTQDPDFVPSGPMYWNSKAFHR 181

[Close]
BLAST of MELO3C021559 vs. NCBI nr
Match: gi|147843475|emb|CAN82060.1| (hypothetical protein VITISV_016428 [Vitis vinifera])

HSP 1 Score: 72.4 bits (176), Expect = 4.2e-10
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 1 

Query: 30  YTKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHRMTS 80
           YT L+R+E GLRRAR+ IREAK  N+T +PD++P+ PIYWN  AFHR  S
Sbjct: 159 YTTLERVEAGLRRARSAIREAKIGNRTPDPDYIPNGPIYWNXNAFHRQAS 208

[Close]
BLAST of MELO3C021559 vs. NCBI nr
Match: gi|1012028670|ref|XP_015951499.1| (PREDICTED: probable glycosyltransferase At5g03795 [Arachis duranensis])

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-09
Identity = 38/77 (49.35%), Postives = 48/77 (62.34%), Query Frame = 1 

Query: 1   MTPTPKNVEERLYRRTPPSN-LHRRIKGLYYTKLKRIETGLRRARADIREAKFLNQTQNP 60
           M+  P  V E  Y   PP N  H       ++ L RIE GL +ARA I+EA+  NQTQ+P
Sbjct: 97  MSSKPWQVNESYYVPLPPLNESHVVPPKKEFSMLDRIEAGLIQARAAIKEARNWNQTQDP 156

Query: 61  DFVPSSPIYWNSKAFHR 77
           D+VP  P+YWN+KAFHR
Sbjct: 157 DYVPLGPMYWNAKAFHR 173

[Close]
BLAST of MELO3C021559 vs. NCBI nr
Match: gi|359481952|ref|XP_002284018.2| (PREDICTED: probable glycosyltransferase At5g03795 [Vitis vinifera])

HSP 1 Score: 70.5 bits (171), Expect = 1.6e-09
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 1 

Query: 30  YTKLKRIETGLRRARADIREAKFLNQTQNPDFVPSSPIYWNSKAFHR 77
           YT L+R+E GLRRAR+ IREAK  N+T +PD++P+ PIYWN  AFHR
Sbjct: 159 YTTLERVEAGLRRARSAIREAKIGNRTPDPDYIPNGPIYWNVNAFHR 205

The following BLAST results are available for this feature:
BLAST of MELO3C021559 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GLYT3_ARATH6.2e-0645.65Probable glycosyltransferase At5g03795 OS=Arabidopsis thaliana GN=At5g03795 PE=3... [more]
BLAST of MELO3C021559 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKC9_CUCSA2.3e-1587.23Uncharacterized protein OS=Cucumis sativus GN=Csa_6G449280 PE=4 SV=1[more]
A5ADS4_VITVI2.9e-1062.00Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016428 PE=4 SV=1[more]
A0A067F4D6_CITSI3.2e-0965.22Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g048582mg PE=4 SV=1[more]
V4S7X8_9ROSI3.2e-0965.22Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011407mg PE=4 SV=1[more]
B9SRL1_RICCO2.1e-0859.57Catalytic, putative OS=Ricinus communis GN=RCOM_0840140 PE=4 SV=1[more]
BLAST of MELO3C021559 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G03795.13.5e-0745.65 Exostosin family protein[more]
BLAST of MELO3C021559 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659125122|ref|XP_008462519.1|3.3e-1587.23PREDICTED: probable glycosyltransferase At5g03795 [Cucumis melo][more]
gi|449451243|ref|XP_004143371.1|3.3e-1587.23PREDICTED: probable glycosyltransferase At5g03795 [Cucumis sativus][more]
gi|147843475|emb|CAN82060.1|4.2e-1062.00hypothetical protein VITISV_016428 [Vitis vinifera][more]
gi|1012028670|ref|XP_015951499.1|1.6e-0949.35PREDICTED: probable glycosyltransferase At5g03795 [Arachis duranensis][more]
gi|359481952|ref|XP_002284018.2|1.6e-0963.83PREDICTED: probable glycosyltransferase At5g03795 [Vitis vinifera][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0050508 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021559T1MELO3C021559T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021559Silver-seed gourdcarmeB0260
MELO3C021559Silver-seed gourdcarmeB0370
MELO3C021559Silver-seed gourdcarmeB0441
MELO3C021559Silver-seed gourdcarmeB0682
MELO3C021559Wax gourdmewgoB022
MELO3C021559Cucumber (Chinese Long) v3cucmeB000
MELO3C021559Cucumber (Chinese Long) v3cucmeB164
MELO3C021559Cucumber (Chinese Long) v3cucmeB359
MELO3C021559Watermelon (97103) v2mewmbB013
MELO3C021559Watermelon (97103) v2mewmbB038
MELO3C021559Wax gourdmewgoB002
MELO3C021559Wax gourdmewgoB044
MELO3C021559Melon (DHL92) v3.5.1memeB012
MELO3C021559Melon (DHL92) v3.5.1memeB013
MELO3C021559Cucumber (Gy14) v1cgymeB114
MELO3C021559Cucumber (Gy14) v1cgymeB336
MELO3C021559Cucumber (Gy14) v1cgymeB549
MELO3C021559Cucurbita maxima (Rimu)cmameB081
MELO3C021559Cucurbita maxima (Rimu)cmameB212
MELO3C021559Cucurbita maxima (Rimu)cmameB251
MELO3C021559Cucurbita maxima (Rimu)cmameB634
MELO3C021559Cucurbita moschata (Rifu)cmomeB075
MELO3C021559Cucurbita moschata (Rifu)cmomeB196
MELO3C021559Cucurbita moschata (Rifu)cmomeB239
MELO3C021559Cucurbita moschata (Rifu)cmomeB624
MELO3C021559Wild cucumber (PI 183967)cpimeB000
MELO3C021559Wild cucumber (PI 183967)cpimeB162
MELO3C021559Wild cucumber (PI 183967)cpimeB350
MELO3C021559Cucumber (Chinese Long) v2cumeB005
MELO3C021559Cucumber (Chinese Long) v2cumeB172
MELO3C021559Cucumber (Chinese Long) v2cumeB360
MELO3C021559Watermelon (Charleston Gray)mewcgB002
MELO3C021559Watermelon (Charleston Gray)mewcgB006
MELO3C021559Watermelon (Charleston Gray)mewcgB017
MELO3C021559Watermelon (97103) v1mewmB003
MELO3C021559Watermelon (97103) v1mewmB007
MELO3C021559Cucurbita pepo (Zucchini)cpemeB155
MELO3C021559Cucurbita pepo (Zucchini)cpemeB358
MELO3C021559Cucurbita pepo (Zucchini)cpemeB467
MELO3C021559Cucurbita pepo (Zucchini)cpemeB550
MELO3C021559Cucurbita pepo (Zucchini)cpemeB594
MELO3C021559Bottle gourd (USVL1VR-Ls)lsimeB162
MELO3C021559Bottle gourd (USVL1VR-Ls)lsimeB163
MELO3C021559Bottle gourd (USVL1VR-Ls)lsimeB234
MELO3C021559Cucumber (Gy14) v2cgybmeB001
MELO3C021559Cucumber (Gy14) v2cgybmeB140
MELO3C021559Cucumber (Gy14) v2cgybmeB300