MELO3C021540 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021540
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	RNA exonuclease 4
Location	chr9 : 3431941 .. 3435439 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGTAATGTCACTTCTTCTAATTCATAATTGGACTTAATTAAGAAATTCTTTTTGGAACATACCCACCTGAACCAAAATATTTACAAGATAATTTTGCTAAATATCACAACGATGGATCGTGATAAACCAATATAGACTATTAGATATGTCTATCTGTATCATGATAGATATATACGGTGGTCTATTGTCACAGATAGATTGTGATATTTCTTTTGTTCTATTAGAGAATATTTTTAGAAGTTTTGTCATTTAAAATAATTTTCCTCGAAATTAAGCCCAAAAGTTACGACATATGTTTGATCTCATAGTATGTTAAAAATAATTTCTAAGAGGATGAGTTATGATAGATTTATTCTTAGAATATTATCATTCCTGTCTATGCACTTTGAGTTTCATCAATAATTTTTAAAGATAGCCACTTTATATTTAGTTTAGTAAAAAACTAGTCTCTCTAACTAGAATTTTCGTTATTATAAACTTTGGATAACTTTTTTCTCTATTAGTATAAGTCTCTCTACTGAAAATATTAGGGACTAAATGGAATGAAACCGAAAAATAAAAATATTCAAAATAATATTTCAATATAGTGTAAAAATTTGTAGATCAAGATTTAAAACAGGTGAAATAAACATTAATATTCGAGAAGAAAAACGATGTTATAGGAGTTCGAACACCAAACTTCATTCTCTAATATATCATGTTAAGAGCTTAAATTGATGGGTTAAGATTCTTACATTTTCATTATTGTGTTATTAGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCAGTTAATTCTGTATGAATCCTAAAAGAACATGCATCAAAATATACTTTAAATTCTTGTTGATTTTAAAATCTTGATTTTTTTTTTTTGTGTTCTGTTCTGGGATATCAGGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTAGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACATATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTAAGTAAAATTAAATTCATGTATATAAATTTGAAATTTAATATTATTACTCCTTTGCTTTTTTGGAATTTTGTCAAATTTTTTAGAAAAGTTAGGGACCAAATAAAAACCCGTTTGACTATTTTCAAACCTAAAAACCAACAATTTTGTAATTAATTTACTTTATAATATTTTAATACCGTAAAATGAAATAGATAGAACCATGTGATCGAACCGTTGTCAACACATGTATATACATATCATTAGAATTTAATTCATAGTTAAAATTTAGTTGTTATAATTTTATAAGAGCAAAGATCAGGTTTAATCTAAGTTAATTACTTTCGATCTCTTGCATCCTATTCAATATTTTTTGTCACTTAATATATATCTTGGGTGTTGTTTTAGGTTTCAAATATAAAACAAAAATTCGATCAACTTAGATTATAGTCAAGTTTTGTTTGGTTTCGTTTGATAATACTCTAATAAAACCCAAAACAATACCTAATTTTAAGTCGAATAATTTATCAAACCATATTGACTTAAATTCTAACTTTCACCGAACTAAATTTGCAATTTACCCTAATAATATAACCCATAAAATTTTATGAATATATTTGAAACTTTGTCATAACATTAACCTATATTAAATCTTCCATTTCTAATTTAAAAATTGAATTTTCTCAAAGCAAACACAAAATACAAAATTGAAATGATTGTTTTAACCTTTGATATGTTAAAATTAACATTAGGTATGAAACAACTGGAATTCGTCCAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAAGACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGTAAATTGCTCGTAATAAAATTTAAATTTGTTGTAACCCATCAGCCTAAGTCGTTTTTAAGTTTCATATAGAAAATAACAAACATGGGTCCTCTAAGGATCTACTATATTTGCATATATATTACTTTTTTCTTGCATGAAAAAGAAATGGTCAAATTCAAACTTCTAACCTTTAAACTAAAAGTTTTTTTTCCTTCCTAATTTAAGCTATTAGTATTATTGGTGAAACCCTTTTCACATCTTATTGCATGTAGAAGTGAGCTCTAAACATTTAAGTTTTGTTGTTTGATTTAGTTTTCTGGTTTTTAATAATTTATGTTTGTTTTCTCTCTGTATTTCAAAACTAGTTGGTTTGATTTGACCTTTGAAAACATGAGTAGAAAGTGACTAATAACAAAAACACTTACCTGTAGAAGTAGCGTTATATAAGCTTTAACTATTTTTTAAAAGAAAAAAAAGTTATCAAACAACACCCTTGATTTCTTGATTTTATGCACCGACCCGCAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCTAGCTCAAGTGTATCTAGGGTAAGTTGACCCTTTAAACAAACTCTTTTTTTTTTTTTTTACTGAAAAGTCCTCCCTAAAATTTTACTTCAATTCTATTCATCTTTTTCATTTAAGGATTGAGATCCATGAAATAATACATAAATATATATCACTTGATGGGTCAAATTGGTGAAAGTAAGAAGTAAAAGGCAGATTTAGTACACTAGTACTAGAAAATTTTCCATATATATATTTTTATTTTTCGATAATATGTCGTTTTTCTCTATAGAAAATGATTAACTAAAAAGTGTGTTTTGTTAATTGTAGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGAGGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGAGAGCTTCATATATTCTTCTCAACAATGGTGGAATTTAAATTTGGGTTGCCATAGCACAATTAAGTTCAAGTTCTTCATTGTCAAGCAAATATAGATTTATTTGGTGTGATGGGAATTTTTTGTTTGATTGTTTTCATTTTTATTAACCAATTTGGCATAATGTAAA

mRNA sequence

ATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCAGTTAATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTAGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACATATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAAGACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGAGGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGAGAGCTTCATATATTCTTCTCAACAATGGTGGAATTTAAATTTGGGTTGCCATAGCACAATTAAGTTCAAGTTCTTCATTGTCAAGCAAATATAGATTTATTTGGTGTGATGGGAATTTTTTGTTTGATTGTTTTCATTTTTATTAACCAATTTGGCATAATGTAAA

Coding sequence (CDS)

ATGAGGACTTCTTTTCACTCACATCATGAACCAACTTGTGCCATTTGCAAGAAACATTGTCGATCTCTTGATTCTCTTAGAGAACATCTCATTGGGCCACTGCCAAAACAAGAATGCAGAAACATCTTTGCTACAAGAGGATGCAAGTTTTGCTTGGCCATCCTTGACAGTTCTTACTCACAAAGACTCCACCAAGAAAGATGCCAATTCTCTCCAGTTAATTCTGGACTTCTTGCTCGTTTCGCCAACTTGGGAATTCGTGATGGTTCAACCATCATCGACAGCGGGAGAACTCGAGGCTCAGGGGCCATCGCGCTAGCTTGCAAATATGTAGGTGGAGGAAGTGATGGGTCGCTGGACATATGTGCTAAGGTTTGCCTTGTTGATGAGGGTGAAAATGTCATCTTCTATAGCTATGTCAAGCCTATAATTCCTGTTACAAATTATAGGTATGAAACAACTGGAATTCGTCCAGAACATATTCGAGATGCAATGCCAATGAAACAAGTTCAAAAGAAAATTCAAGAAATCCTCTACAATGGAGGTGAGAAGGCTAGGATTCTTGTGGGTCATTGCGTCGAAGACGATCTCAAACGCCTACAAATTGGTTACCCATCCGTCATGATAAGGGACACAGCAAACTATCCACCATTGATGAAGTCAAGCAAGCTTTGCAATTCTCTCAAGTATCTAGCTCAAGTGTATCTAGGATTTGATCTTCAAAATGGTATACAAGATCCTTATGAAGAATGTATTGTTGCTATGAGATTATACAAGAGAATGAGATCACAAGTTCATAGGAGGAAAGAGAGCTATCCAATGGCTTCTGACCCACAAAACAAAAATAATTTTGCTATTTGGAGGGAAAATGAGCTTCAAAGGATGAGTCCAGAACAAATGTTGGAGATTTCTAGGTCTGATTATTATTGTTGGTGCATGGATTTGAGGACTTGA

Protein sequence

MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRENELQRMSPEQMLEISRSDYYCWCMDLRT*

Homology

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BLAST of MELO3C021540 vs. Swiss-Prot
Match: REXO4_HUMAN (RNA exonuclease 4 OS=Homo sapiens GN=REXO4 PE=1 SV=2)

HSP 1 Score: 107.1 bits (266), Expect = 3.7e-22
Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 1


Query: 84  LGIRDGSTIIDSGRTRGSG----AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSY 143
           LG  +GS  +   + +  G    A+AL C+ VG G  G   + A+V +V++    ++  Y
Sbjct: 220 LGQSEGSVSLSLVKEQAFGGLTRALALDCEMVGVGPKGEESMAARVSIVNQYGKCVYDKY 279

Query: 144 VKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKR 203
           VKP  PVT+YR   +GIRPE+++    ++ VQK++ E+L     K RILVGH + +DLK 
Sbjct: 280 VKPTEPVTDYRTAVSGIRPENLKQGEELEVVQKEVAEML-----KGRILVGHALHNDLKV 339

Query: 204 LQIGYPSVMIRDTANYPPLMKSSKLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY 263
           L + +P   IRDT  Y P     K    SL+ L++  LG  +Q       ++   AMRLY
Sbjct: 340 LFLDHPKKKIRDTQKYKPFKSQVKSGRPSLRLLSEKILGLQVQQAEHCSIQDAQAAMRLY 399

Query: 264 KRMRSQ 265
             ++ +
Sbjct: 400 VMVKKE 400

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BLAST of MELO3C021540 vs. Swiss-Prot
Match: REXO4_XENLA (RNA exonuclease 4 OS=Xenopus laevis GN=rexo4 PE=2 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21
Identity = 62/156 (39.74%), Postives = 83/156 (53.21%), Query Frame = 1


Query: 104 IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRD 163
           +A+ C+ VG G DG   I A+V +V+     ++  YVKP   VT+YR   +GIRPE ++ 
Sbjct: 235 VAMDCEMVGVGMDGEESILARVSIVNLFGKCVYDKYVKPTERVTDYRTAVSGIRPEDVKK 294

Query: 164 AMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSK 223
             P K VQK++ EIL     + R LVGH V +DLK L + +P   IRDT  Y P  +  K
Sbjct: 295 GEPFKVVQKEVSEIL-----RGRTLVGHAVHNDLKILFLDHPKKAIRDTQKYKPFKQKVK 354

Query: 224 LCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLY 259
               SLK L +  L   +Q G     ++   AMRLY
Sbjct: 355 SGRPSLKLLCEKILNVKVQTGEHCSVQDAQAAMRLY 385

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BLAST of MELO3C021540 vs. Swiss-Prot
Match: REXO4_MOUSE (RNA exonuclease 4 OS=Mus musculus GN=Rexo4 PE=2 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-20
Identity = 60/163 (36.81%), Postives = 89/163 (54.60%), Query Frame = 1


Query: 103 AIALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIR 162
           A+AL C+ VG G  G   I A+V +V++    ++  YVKP  PVT+YR   +GIRPE+++
Sbjct: 253 ALALDCEMVGVGPKGEESIAARVSIVNQYGKCVYDKYVKPTEPVTDYRTAVSGIRPENLK 312

Query: 163 DAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSS 222
                + V+K++ E+L     K RILVGH + +DLK L + +P   IRDT  + P     
Sbjct: 313 QGEEFEVVKKEVAEML-----KGRILVGHALHNDLKVLFLDHPKKKIRDTQKFKPFRSRV 372

Query: 223 KLCN-SLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQ 265
           K    SLK L++  LG  +Q       ++   AMRLY  ++ +
Sbjct: 373 KSGRPSLKRLSEKILGIRVQQAEHCSIQDAQAAMRLYVMVKRE 410

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BLAST of MELO3C021540 vs. Swiss-Prot
Match: REXO4_KLULA (RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=REX4 PE=3 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.2e-20
Identity = 61/166 (36.75%), Postives = 90/166 (54.22%), Query Frame = 1


Query: 97  RTRGSGA-IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTG 156
           RT G G  +++ C++VG G DG     A+V +V+   NV+   +V+P  PVT++R   +G
Sbjct: 112 RTNGVGKYVSMDCEFVGVGPDGKDSALARVSIVNYYGNVVLDLFVRPKEPVTDWRTWVSG 171

Query: 157 IRPEHIRDAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANY 216
           I+P H+ +A+  +  QK++  +L     K RILVGH V  DL  L + +P  MIRDT+ +
Sbjct: 172 IKPHHMANAVTQEDCQKQVSNVL-----KGRILVGHSVHHDLTALMLSHPRRMIRDTSRH 231

Query: 217 PPLMK--SSKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYK 260
            P  +  S     SLK L +  L  D+Q+G     E+    M LYK
Sbjct: 232 MPFRQKYSEGKTPSLKKLTKEILQLDIQDGEHSSIEDARATMLLYK 272

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BLAST of MELO3C021540 vs. Swiss-Prot
Match: REXO4_ASPFU (RNA exonuclease 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rex4 PE=3 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.6e-20
Identity = 63/183 (34.43%), Postives = 97/183 (53.01%), Query Frame = 1


Query: 104 IALACKYVGGGSDGSLDIC-AKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIR 163
           +A+ C+ VG G +   D   A+V +V+     ++ SYV+P   +T++R   +GI P+H+ 
Sbjct: 117 VAMDCEMVGVGPNPDNDSALARVSIVNFNGEQVYDSYVRPKEMITDWRTHVSGISPKHMA 176

Query: 164 DAMPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMK-S 223
           +A  ++QVQK + EIL       RILVGH V +DL  L +G+P   IRDT+ +PP  K +
Sbjct: 177 EARSLEQVQKDVAEIL-----DGRILVGHAVSNDLDALLLGHPKRDIRDTSKHPPYRKIA 236

Query: 224 SKLCNSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRK-ESYPMASDPQN 283
                 LK LA  +LG ++Q+G     E+    M LY+R +    R   + +P+      
Sbjct: 237 GGGSPRLKILASEFLGLNIQDGAHSSVEDAKATMLLYRRDKEAFEREHLKKWPIRVVVDK 294

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BLAST of MELO3C021540 vs. TrEMBL
Match: D9ZIT5_MALDO (C2H2L domain class transcription factor OS=Malus domestica GN=C2H2L25 PE=2 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 3.8e-135
Identity = 231/323 (71.52%), Postives = 269/323 (83.28%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           MRTS+HS HEP C ICKKHCRS +SLREHLIGPLPKQECRNIF TRGCK CLAIL+S Y+
Sbjct: 32  MRTSYHSSHEPMCGICKKHCRSFESLREHLIGPLPKQECRNIFITRGCKICLAILESPYA 91

Query: 61  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 120
            R+HQ+RCQ S  N+GLL RFANLGIRD +   + G TRG+  +ALACK VGGGSDGSLD
Sbjct: 92  LRVHQDRCQLSGGNAGLLGRFANLGIRDNT---EGGSTRGTQVVALACKMVGGGSDGSLD 151

Query: 121 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYN 180
           +CAKVCL DE +N+IF SYVKP++PVTNYRYETTGIRPE++RDAMP++QVQKKIQ+ L N
Sbjct: 152 LCAKVCLTDEYDNIIFQSYVKPLLPVTNYRYETTGIRPEYLRDAMPLRQVQKKIQDFLCN 211

Query: 181 G---------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYL 240
           G         G KARILVGH ++ DL  LQ  YP VMIRDTA YPPLMK+SKL NSLKYL
Sbjct: 212 GEPMWKIRPRGGKARILVGHGLDHDLDSLQFEYPQVMIRDTAKYPPLMKTSKLSNSLKYL 271

Query: 241 AQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRENE 300
            Q YLG+++Q GIQDPYE+C+  M+LY RMRSQVH + E+YP+ASDPQN+NNFA WR+NE
Sbjct: 272 TQAYLGYEIQTGIQDPYEDCVATMKLYMRMRSQVH-KVEAYPLASDPQNRNNFAAWRQNE 331

Query: 301 LQRMSPEQMLEISRSDYYCWCMD 315
           L+RMSP+QMLEISRSDYYCWC+D
Sbjct: 332 LERMSPDQMLEISRSDYYCWCLD 350

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BLAST of MELO3C021540 vs. TrEMBL
Match: A0A0D2R3S2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G340600 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 6.5e-135
Identity = 227/324 (70.06%), Postives = 271/324 (83.64%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           MRTSFHS HEPTC +CKKHCRS +SLREHLIGPLPKQECRN+F  RGCKFCLAILDS Y+
Sbjct: 28  MRTSFHSVHEPTCGVCKKHCRSFESLREHLIGPLPKQECRNVFNIRGCKFCLAILDSPYA 87

Query: 61  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 120
            R+HQ+RCQ S VN G+ A  ANLG+RD  T ID+G +RG   +ALACK VGGGSD SLD
Sbjct: 88  LRVHQDRCQLSGVNHGISAYMANLGLRDSLT-IDNGYSRGPQVVALACKTVGGGSDRSLD 147

Query: 121 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYN 180
           +CA+VC++DE EN+IF+++VKP IPVTNYRYETTGIRPEH+RDAMP++QVQ+K+Q+ L N
Sbjct: 148 LCARVCIIDENENIIFHTFVKPPIPVTNYRYETTGIRPEHLRDAMPLRQVQRKVQDFLCN 207

Query: 181 G----------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKY 240
           G          G KARILVGH ++ DL ++Q+ YP +MIRDTA YPPLMK+SKL NSLKY
Sbjct: 208 GEPTWKIRSPKGGKARILVGHGLDHDLDKMQVEYPPIMIRDTAKYPPLMKTSKLSNSLKY 267

Query: 241 LAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWREN 300
           L Q YLG+D+QNGIQDPYE+C+  MRLY RMR QVHRR++ YP+ASDPQN+NNFA WR+N
Sbjct: 268 LTQAYLGYDIQNGIQDPYEDCVATMRLYVRMRRQVHRRQD-YPLASDPQNRNNFASWRQN 327

Query: 301 ELQRMSPEQMLEISRSDYYCWCMD 315
           EL+RMSPE+ML ISRSDYYCWC+D
Sbjct: 328 ELERMSPEEMLAISRSDYYCWCLD 349

[Close]

BLAST of MELO3C021540 vs. TrEMBL
Match: A0A0D2PX45_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G262000 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 4.2e-134
Identity = 228/324 (70.37%), Postives = 269/324 (83.02%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           MRTSFHS HEPTC +CKKHCRS +SLREHLIGPLPKQECRN F  RGCKFCLAILDS Y+
Sbjct: 28  MRTSFHSVHEPTCGVCKKHCRSFESLREHLIGPLPKQECRNAFNIRGCKFCLAILDSPYA 87

Query: 61  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 120
            R+HQ+RCQ S VN G+ A  ANLG+RD  T ID+G +RG   +ALACK VGGGSD SLD
Sbjct: 88  LRVHQDRCQLSGVNHGISAYMANLGLRDSLT-IDNGYSRGPEVVALACKTVGGGSDRSLD 147

Query: 121 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYN 180
           +CA+VC++DE EN+IF++YVKP IPVTNYRYETTGIRPEH+RDAMP++QVQ+K+Q+ L N
Sbjct: 148 LCARVCIIDEKENIIFHTYVKPPIPVTNYRYETTGIRPEHLRDAMPLRQVQRKVQDFLCN 207

Query: 181 G----------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKY 240
           G          G KARILVGH ++ DL ++Q+ YP  MIRDTA YPPLMK+SKL NSLKY
Sbjct: 208 GEPTWKIRSPKGGKARILVGHGLDHDLDKMQVEYPPKMIRDTAKYPPLMKTSKLSNSLKY 267

Query: 241 LAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWREN 300
           L Q YLG+D+QNGIQDPYE+C+  MRLY RMR QVHRR++ YP+ASDPQN+NNFA WR+N
Sbjct: 268 LTQAYLGYDIQNGIQDPYEDCVATMRLYVRMRRQVHRRQD-YPLASDPQNRNNFASWRQN 327

Query: 301 ELQRMSPEQMLEISRSDYYCWCMD 315
           EL+RMSPE+ML ISRSDYYCWC+D
Sbjct: 328 ELERMSPEEMLAISRSDYYCWCLD 349

[Close]

BLAST of MELO3C021540 vs. TrEMBL
Match: M5WT09_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008078mg PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 9.4e-134
Identity = 232/325 (71.38%), Postives = 270/325 (83.08%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           MRTS+HS HEPTC ICKKHCRS +SLREHLIGPLPKQECRNIF+TRGCKFCLAILDS Y+
Sbjct: 32  MRTSYHSAHEPTCGICKKHCRSFESLREHLIGPLPKQECRNIFSTRGCKFCLAILDSPYA 91

Query: 61  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 120
            R+HQ+RCQ S VN+GLL RFANLGIRD +   ++G TRG+  +ALACK VGGGSDGSLD
Sbjct: 92  LRVHQDRCQLSGVNAGLLGRFANLGIRDNT---ENGSTRGTQVVALACKMVGGGSDGSLD 151

Query: 121 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYN 180
           +CAKVCL+DE EN+IF SYVKP++PVTNYRYETTGIRPE++RDAMP++QVQKKIQ+ L N
Sbjct: 152 LCAKVCLIDEYENIIFQSYVKPLLPVTNYRYETTGIRPEYLRDAMPLRQVQKKIQDFLCN 211

Query: 181 G---------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYL 240
           G         G KARILVGH ++ DL  LQ+ YP VMIRDTA YPPLMK+SKL NSLKY 
Sbjct: 212 GEPMWKIRPRGGKARILVGHGLDHDLDSLQVEYPQVMIRDTAKYPPLMKTSKLSNSLKY- 271

Query: 241 AQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRENE 300
                  D+Q GIQDPYE+C+  M+LY RMRSQVH + E+YP+ASDPQN+NNFA WR+NE
Sbjct: 272 -------DIQTGIQDPYEDCVATMKLYMRMRSQVH-KTEAYPLASDPQNRNNFASWRQNE 331

Query: 301 LQRMSPEQMLEISRSDYYCWCMDLR 317
           L+RM+PEQMLE SRSDYYCWC+D R
Sbjct: 332 LERMNPEQMLEASRSDYYCWCLDSR 344

[Close]

BLAST of MELO3C021540 vs. TrEMBL
Match: W9S0J7_9ROSA (RNA exonuclease 4 OS=Morus notabilis GN=L484_020501 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 9.4e-134
Identity = 234/329 (71.12%), Postives = 272/329 (82.67%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           MRTS+HS HEP C IC+KHCRS +SLREHLIGPLPKQECRNIF+TRGC+FCLAI DS Y+
Sbjct: 33  MRTSYHSVHEPACGICRKHCRSFESLREHLIGPLPKQECRNIFSTRGCRFCLAIFDSPYA 92

Query: 61  QRLHQERCQFSPVN-SGLLARFANLGIRDGSTIIDSGRTRGSGA----IALACKYVGGGS 120
            R+HQ+RCQ S +N SG+L R +NLGIRD   +  SGR+   GA    +ALACK VGGGS
Sbjct: 93  LRIHQDRCQLSGLNGSGVLGRLSNLGIRDNLAMDYSGRSTRGGAGPQVVALACKMVGGGS 152

Query: 121 DGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQ 180
           DGSLDICA+VCL+DE EN+IF+SYVKP IPVTNYRYETTGIRPE++RDAMP++QVQKKIQ
Sbjct: 153 DGSLDICARVCLIDEFENIIFHSYVKPPIPVTNYRYETTGIRPEYLRDAMPVRQVQKKIQ 212

Query: 181 EILYNG----------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLC 240
           + L NG          G KARILVGH ++ DL RLQ+ YPSVMIRDTA YPPLMK+SKL 
Sbjct: 213 DFLCNGEPMWKIRPRSGGKARILVGHGLDHDLDRLQLEYPSVMIRDTAKYPPLMKTSKLS 272

Query: 241 NSLKYLAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFA 300
           NSLKYL Q YLG+D+Q+GIQDPYE+C+  MRLY RMRSQ H R E YP+ASDPQN+NNFA
Sbjct: 273 NSLKYLTQAYLGYDIQSGIQDPYEDCVATMRLYMRMRSQNH-RVEDYPLASDPQNRNNFA 332

Query: 301 IWRENELQRMSPEQMLEISRSDYYCWCMD 315
            WR+ EL+RM+PEQMLEISRSDYYCWC+D
Sbjct: 333 SWRQTELERMTPEQMLEISRSDYYCWCLD 360

[Close]

BLAST of MELO3C021540 vs. TAIR10
Match: AT3G27970.1 (AT3G27970.1 Exonuclease family protein)

HSP 1 Score: 448.4 bits (1152), Expect = 3.8e-126
Identity = 211/323 (65.33%), Postives = 257/323 (79.57%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           M+ S+HS HEPTC +CKKHCRS +SLREHLIGPLPKQEC+NIF+ RGC+FC+ IL+S  S
Sbjct: 34  MKISYHSGHEPTCGVCKKHCRSFESLREHLIGPLPKQECKNIFSLRGCRFCMTILESPNS 93

Query: 61  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 120
           +R+HQERCQFS VNSGL  R A LG+RD   +ID   +R    +AL+CK VGGGSDGSLD
Sbjct: 94  RRIHQERCQFSSVNSGLTTRMAALGLRD-KAMIDYTSSRSPRVVALSCKMVGGGSDGSLD 153

Query: 121 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYN 180
           +CA+VC+ DE +NVIF++YVKP + VT+YRYETTGIRPE++RDAMP+KQVQ+KIQE L N
Sbjct: 154 LCARVCITDESDNVIFHTYVKPSMAVTSYRYETTGIRPENLRDAMPLKQVQRKIQEFLCN 213

Query: 181 G---------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYL 240
           G         G KARILVGH ++ DL RLQ+ YPS MIRDTA YPPLMK+SKL NSLKYL
Sbjct: 214 GEPMWKIRPRGGKARILVGHGLDHDLDRLQLEYPSSMIRDTAKYPPLMKTSKLSNSLKYL 273

Query: 241 AQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRENE 300
            Q YLG+D+  GIQDPYE+C+  MRLY RMR Q H + E+YP+A+D QN++N   WR++E
Sbjct: 274 TQAYLGYDVHFGIQDPYEDCVATMRLYTRMRYQKH-KIEAYPLAADAQNRSNQVAWRQSE 333

Query: 301 LQRMSPEQMLEISRSDYYCWCMD 315
            +RMSP++ML ISRSDYYCWC+D
Sbjct: 334 AERMSPDEMLSISRSDYYCWCLD 354

[Close]

BLAST of MELO3C021540 vs. TAIR10
Match: AT5G40310.1 (AT5G40310.1 Exonuclease family protein)

HSP 1 Score: 448.0 bits (1151), Expect = 5.0e-126
Identity = 213/323 (65.94%), Postives = 253/323 (78.33%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           MR S+HS HEPTC IC KHCRS DSLREHLIGPLPKQEC+NIF+ RGC+FCL IL+S  +
Sbjct: 25  MRISYHSVHEPTCGICNKHCRSFDSLREHLIGPLPKQECKNIFSIRGCRFCLTILESPNA 84

Query: 61  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 120
           +R+HQERCQ S V SGL+ R A LG+R+ ST ID   +R    +AL+CK VGGGSDGSLD
Sbjct: 85  RRIHQERCQLSNVTSGLMIRMAALGLRNNST-IDYTSSRSPRVVALSCKMVGGGSDGSLD 144

Query: 121 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYN 180
           +CA+VC+ DE ENV+F++YVKP IPVTNYRYE TGIRPE++RDAM +K  Q+K+QE L N
Sbjct: 145 LCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPENLRDAMRLKHAQRKVQEFLCN 204

Query: 181 G---------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYL 240
           G           KARILVGH +++ L  LQ+ Y S MIRDTA YPPLMKSSKL NSLKYL
Sbjct: 205 GEPMWKIRPRNGKARILVGHGLDNHLDSLQLEYSSSMIRDTAEYPPLMKSSKLSNSLKYL 264

Query: 241 AQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRENE 300
            Q YLG+D+  GIQDPYE+C+  MRLY RMR Q H R E+YP+ASD QN NNFA WR+NE
Sbjct: 265 TQAYLGYDIHVGIQDPYEDCVATMRLYTRMRYQKH-RAEAYPLASDTQNHNNFAAWRQNE 324

Query: 301 LQRMSPEQMLEISRSDYYCWCMD 315
           L+RMSPE++L++SRSDYYCWC+D
Sbjct: 325 LERMSPEELLDLSRSDYYCWCLD 345

[Close]

BLAST of MELO3C021540 vs. TAIR10
Match: AT2G48100.1 (AT2G48100.1 Exonuclease family protein)

HSP 1 Score: 263.1 bits (671), Expect = 2.3e-70
Identity = 131/319 (41.07%), Postives = 198/319 (62.07%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGP--LPKQECRNIFATRGCKFCLAILDSS 60
           M+ S+HS H+P C +C KHC+S +S+REHL  P  L K  C+ IF  RGC  CL I + +
Sbjct: 36  MKISYHSLHQPRCGVCLKHCKSFESVREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEA 95

Query: 61  YSQRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGS 120
           ++   H+ +C  SP              R+ S+ +   R +   A+AL C+ VGGG+DG+
Sbjct: 96  FALAEHKNKCHLSPPRP-----LGTSTQRNPSSSLAGSRLK---AMALDCEMVGGGADGT 155

Query: 121 LDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEIL 180
           +D CA VCLVD+ ENVIF ++V+P++PVT+YR+E TG+  E ++D MP++ V++++   L
Sbjct: 156 IDQCASVCLVDDDENVIFSTHVQPLLPVTDYRHEITGLTKEDLKDGMPLEHVRERVFSFL 215

Query: 181 ---YNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVY 240
               N G    +LVGH +  D+  L++ YPS ++RDTA Y PLMK++ +  SLKYL + Y
Sbjct: 216 CGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHLLRDTAKYVPLMKTNLVSQSLKYLTKSY 275

Query: 241 LGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRENELQRM 300
           LG+ +Q G  + YE+C+ AMRLYKRMR Q H       + S     N     ++++L++M
Sbjct: 276 LGYKIQCGKHEVYEDCVSAMRLYKRMRDQEH-------VCSGKAEGNGLNSRKQSDLEKM 335

Query: 301 SPEQMLEISRSDYYCWCMD 315
           + E++ + S S+Y CWC+D
Sbjct: 336 NAEELYQKSTSEYRCWCLD 339

[Close]

BLAST of MELO3C021540 vs. TAIR10
Match: AT3G50100.1 (AT3G50100.1 small RNA degrading nuclease 1)

HSP 1 Score: 58.9 bits (141), Expect = 6.5e-09
Identity = 54/162 (33.33%), Postives = 83/162 (51.23%), Query Frame = 1


Query: 104 IALACKYV--GGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHI 163
           +A+ C+ V    G++G +    +V +VD    VI   +VKP  PV +YR + TGI  E I
Sbjct: 141 VAVDCEMVLCEDGTEGLV----RVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAEDI 200

Query: 164 RDA-MPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTA---NYPP 223
            +A + +  +Q+ +Q  L  G     ILVGH +  DL+ L+I +P V+  DTA    YP 
Sbjct: 201 ENASLSVVDIQETLQPFLSTG----TILVGHSLNRDLEVLKIDHPKVI--DTALVFKYPN 260

Query: 224 LMKSSKLCNSLKYLAQVYLGFDL-QNGI-QDPYEECIVAMRL 258
             K  +   SL  L +  LG+++ + G+  D   +   AM+L
Sbjct: 261 TRKLRR--PSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKL 290

[Close]

BLAST of MELO3C021540 vs. TAIR10
Match: AT5G05540.1 (AT5G05540.1 small RNA degrading nuclease 2)

HSP 1 Score: 48.9 bits (115), Expect = 6.7e-06
Identity = 45/145 (31.03%), Postives = 71/145 (48.97%), Query Frame = 1


Query: 104 IALACKYVGGGSDGSLDICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRD 163
           IA+ C+ V    DGS +   +V  VD    VI   +VKP  PV +YR   TG+  + +  
Sbjct: 143 IAIDCEMVLC-EDGS-EAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEK 202

Query: 164 A-MPMKQVQKKIQEILYNGGEKARILVGHCVEDDLKRLQIGYPSVMIRDTA-----NYPP 223
           A + +  +Q+K+   +     +  ILVG  +  DLK L++ +  V+  DT+     NY  
Sbjct: 203 ATISVVDIQEKLLMFI----SEDTILVGQSLNHDLKVLKVDHARVI--DTSLVFKYNYDG 262

Query: 224 LMKSSKLCN-SLKYLAQVYLGFDLQ 242
             +  +L   SL YL +  LG+++Q
Sbjct: 263 TRRPLRLKRPSLNYLCKCILGYEVQ 279

[Close]

BLAST of MELO3C021540 vs. NCBI nr
Match: gi|778708714|ref|XP_011656270.1| (PREDICTED: RNA exonuclease 4-like [Cucumis sativus])

HSP 1 Score: 632.5 bits (1630), Expect = 4.0e-178
Identity = 303/316 (95.89%), Postives = 310/316 (98.10%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQEC+NIFATRGCKFCLAI DSSYS
Sbjct: 29  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECKNIFATRGCKFCLAIFDSSYS 88

Query: 61  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 120
           QRLHQERCQFSPVNSGLLARFANLGIRDGST+IDSGRTRGSGAIALACKYVGGGSDGS+D
Sbjct: 89  QRLHQERCQFSPVNSGLLARFANLGIRDGSTVIDSGRTRGSGAIALACKYVGGGSDGSMD 148

Query: 121 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYN 180
           ICAKVCL+DEGENVIFYSYVKP+  VTNYRYETTGIRPEHIRDAMP+KQVQKKIQEILYN
Sbjct: 149 ICAKVCLIDEGENVIFYSYVKPVTAVTNYRYETTGIRPEHIRDAMPVKQVQKKIQEILYN 208

Query: 181 GGEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDL 240
           GGEKARILVG CVEDDLKRLQIGYPS MIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDL
Sbjct: 209 GGEKARILVGDCVEDDLKRLQIGYPSFMIRDTANYPPLMKSSKLCNSLKYLAQVYLGFDL 268

Query: 241 QNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRENELQRMSPEQM 300
           QNGIQDPYEECIVAMRLYKRMRSQVH RKE+YPMASDPQNKNNFAIWRENELQRMSPEQM
Sbjct: 269 QNGIQDPYEECIVAMRLYKRMRSQVH-RKENYPMASDPQNKNNFAIWRENELQRMSPEQM 328

Query: 301 LEISRSDYYCWCMDLR 317
           LEISRSDYYCWCMDLR
Sbjct: 329 LEISRSDYYCWCMDLR 343

[Close]

BLAST of MELO3C021540 vs. NCBI nr
Match: gi|659118043|ref|XP_008458921.1| (PREDICTED: RNA exonuclease 4 [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 9.3e-151
Identity = 261/325 (80.31%), Postives = 291/325 (89.54%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS
Sbjct: 29  MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 88

Query: 61  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 120
           QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD
Sbjct: 89  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 148

Query: 121 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYN 180
           ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYE TG+RPEH+RDAMP+KQVQKKIQE L N
Sbjct: 149 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYEFTGVRPEHLRDAMPLKQVQKKIQEFLCN 208

Query: 181 GGE----------KARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKY 240
           G +          KARILVGH +++ L  LQI YPS+MIRDTA YPPLMK+SKL NSL Y
Sbjct: 209 GEQMWKIRPGSTRKARILVGHGLQEYLTSLQIDYPSIMIRDTAKYPPLMKTSKLSNSLHY 268

Query: 241 LAQVYLGFDLQNGIQ-DPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRE 300
           L Q YLG++++NG + + YEEC+  MRLY +M+SQVH+R+E YP+ASDP NK NFAIW++
Sbjct: 269 LTQTYLGYNMENGKKSEGYEECVATMRLYLKMKSQVHKREE-YPLASDPPNKFNFAIWKQ 328

Query: 301 NELQRMSPEQMLEISRSDYYCWCMD 315
            EL++M+P+Q+L+ISRSDYYCWC+D
Sbjct: 329 LELEKMTPQQLLQISRSDYYCWCLD 352

[Close]

BLAST of MELO3C021540 vs. NCBI nr
Match: gi|645249126|ref|XP_008230608.1| (PREDICTED: RNA exonuclease 4 [Prunus mume])

HSP 1 Score: 503.4 bits (1295), Expect = 2.8e-139
Identity = 238/325 (73.23%), Postives = 276/325 (84.92%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           MRTS+HS HEPTC ICKKHCRS +SLREHLIGPLPKQECRNIF+TRGCKFCLAILDSSY+
Sbjct: 32  MRTSYHSAHEPTCGICKKHCRSFESLREHLIGPLPKQECRNIFSTRGCKFCLAILDSSYA 91

Query: 61  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 120
            R+HQ+RCQ S  N+GLL RFANLGIRD +   ++G TRG+  +ALACK VGGGSDGSLD
Sbjct: 92  LRVHQDRCQLSGANAGLLGRFANLGIRDNT---ENGSTRGTQVVALACKMVGGGSDGSLD 151

Query: 121 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYN 180
           +CAKVCL+DE EN+IF SYVKP++PVTNYRYETTGIRPE++RDAM ++QVQKKIQ+ L N
Sbjct: 152 LCAKVCLIDEYENIIFQSYVKPLLPVTNYRYETTGIRPEYLRDAMHLRQVQKKIQDFLCN 211

Query: 181 G---------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYL 240
           G         G KARILVGH ++ DL  LQ+ YP VMIRDTA YPPLMK+SKL NSLKYL
Sbjct: 212 GEPMWKIRPRGGKARILVGHGLDHDLDSLQVEYPQVMIRDTAKYPPLMKTSKLSNSLKYL 271

Query: 241 AQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRENE 300
            Q YLG+D+Q GIQDPYE+C+  M+LY RMRSQVH +KE+YP+ASDPQN+NNFA WR+NE
Sbjct: 272 TQAYLGYDIQTGIQDPYEDCVATMKLYMRMRSQVH-KKEAYPLASDPQNRNNFASWRQNE 331

Query: 301 LQRMSPEQMLEISRSDYYCWCMDLR 317
           L+RMSPEQMLE SRSDYYCWC+D R
Sbjct: 332 LERMSPEQMLEASRSDYYCWCLDSR 352

[Close]

BLAST of MELO3C021540 vs. NCBI nr
Match: gi|658309786|ref|NP_001280843.1| (RNA exonuclease 4-like [Malus domestica])

HSP 1 Score: 489.2 bits (1258), Expect = 5.5e-135
Identity = 231/323 (71.52%), Postives = 269/323 (83.28%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           MRTS+HS HEP C ICKKHCRS +SLREHLIGPLPKQECRNIF TRGCK CLAIL+S Y+
Sbjct: 32  MRTSYHSSHEPMCGICKKHCRSFESLREHLIGPLPKQECRNIFITRGCKICLAILESPYA 91

Query: 61  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 120
            R+HQ+RCQ S  N+GLL RFANLGIRD +   + G TRG+  +ALACK VGGGSDGSLD
Sbjct: 92  LRVHQDRCQLSGGNAGLLGRFANLGIRDNT---EGGSTRGTQVVALACKMVGGGSDGSLD 151

Query: 121 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYN 180
           +CAKVCL DE +N+IF SYVKP++PVTNYRYETTGIRPE++RDAMP++QVQKKIQ+ L N
Sbjct: 152 LCAKVCLTDEYDNIIFQSYVKPLLPVTNYRYETTGIRPEYLRDAMPLRQVQKKIQDFLCN 211

Query: 181 G---------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKYL 240
           G         G KARILVGH ++ DL  LQ  YP VMIRDTA YPPLMK+SKL NSLKYL
Sbjct: 212 GEPMWKIRPRGGKARILVGHGLDHDLDSLQFEYPQVMIRDTAKYPPLMKTSKLSNSLKYL 271

Query: 241 AQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWRENE 300
            Q YLG+++Q GIQDPYE+C+  M+LY RMRSQVH + E+YP+ASDPQN+NNFA WR+NE
Sbjct: 272 TQAYLGYEIQTGIQDPYEDCVATMKLYMRMRSQVH-KVEAYPLASDPQNRNNFAAWRQNE 331

Query: 301 LQRMSPEQMLEISRSDYYCWCMD 315
           L+RMSP+QMLEISRSDYYCWC+D
Sbjct: 332 LERMSPDQMLEISRSDYYCWCLD 350

[Close]

BLAST of MELO3C021540 vs. NCBI nr
Match: gi|763778840|gb|KJB45963.1| (hypothetical protein B456_007G340600 [Gossypium raimondii])

HSP 1 Score: 488.4 bits (1256), Expect = 9.4e-135
Identity = 227/324 (70.06%), Postives = 271/324 (83.64%), Query Frame = 1


Query: 1   MRTSFHSHHEPTCAICKKHCRSLDSLREHLIGPLPKQECRNIFATRGCKFCLAILDSSYS 60
           MRTSFHS HEPTC +CKKHCRS +SLREHLIGPLPKQECRN+F  RGCKFCLAILDS Y+
Sbjct: 28  MRTSFHSVHEPTCGVCKKHCRSFESLREHLIGPLPKQECRNVFNIRGCKFCLAILDSPYA 87

Query: 61  QRLHQERCQFSPVNSGLLARFANLGIRDGSTIIDSGRTRGSGAIALACKYVGGGSDGSLD 120
            R+HQ+RCQ S VN G+ A  ANLG+RD  T ID+G +RG   +ALACK VGGGSD SLD
Sbjct: 88  LRVHQDRCQLSGVNHGISAYMANLGLRDSLT-IDNGYSRGPQVVALACKTVGGGSDRSLD 147

Query: 121 ICAKVCLVDEGENVIFYSYVKPIIPVTNYRYETTGIRPEHIRDAMPMKQVQKKIQEILYN 180
           +CA+VC++DE EN+IF+++VKP IPVTNYRYETTGIRPEH+RDAMP++QVQ+K+Q+ L N
Sbjct: 148 LCARVCIIDENENIIFHTFVKPPIPVTNYRYETTGIRPEHLRDAMPLRQVQRKVQDFLCN 207

Query: 181 G----------GEKARILVGHCVEDDLKRLQIGYPSVMIRDTANYPPLMKSSKLCNSLKY 240
           G          G KARILVGH ++ DL ++Q+ YP +MIRDTA YPPLMK+SKL NSLKY
Sbjct: 208 GEPTWKIRSPKGGKARILVGHGLDHDLDKMQVEYPPIMIRDTAKYPPLMKTSKLSNSLKY 267

Query: 241 LAQVYLGFDLQNGIQDPYEECIVAMRLYKRMRSQVHRRKESYPMASDPQNKNNFAIWREN 300
           L Q YLG+D+QNGIQDPYE+C+  MRLY RMR QVHRR++ YP+ASDPQN+NNFA WR+N
Sbjct: 268 LTQAYLGYDIQNGIQDPYEDCVATMRLYVRMRRQVHRRQD-YPLASDPQNRNNFASWRQN 327

Query: 301 ELQRMSPEQMLEISRSDYYCWCMD 315
           EL+RMSPE+ML ISRSDYYCWC+D
Sbjct: 328 ELERMSPEEMLAISRSDYYCWCLD 349

The following BLAST results are available for this feature:

BLAST of MELO3C021540 vs. Swiss-Prot


Match Name	E-value	Identity	Description
REXO4_HUMAN	3.7e-22	34.95	RNA exonuclease 4 OS=Homo sapiens GN=REXO4 PE=1 SV=2	[more]
REXO4_XENLA	3.1e-21	39.74	RNA exonuclease 4 OS=Xenopus laevis GN=rexo4 PE=2 SV=2	[more]
REXO4_MOUSE	1.2e-20	36.81	RNA exonuclease 4 OS=Mus musculus GN=Rexo4 PE=2 SV=2	[more]
REXO4_KLULA	1.2e-20	36.75	RNA exonuclease 4 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 707...	[more]
REXO4_ASPFU	2.6e-20	34.43	RNA exonuclease 4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 10...	[more]

BLAST of MELO3C021540 vs. TrEMBL


Match Name	E-value	Identity	Description
D9ZIT5_MALDO	3.8e-135	71.52	C2H2L domain class transcription factor OS=Malus domestica GN=C2H2L25 PE=2 SV=1	[more]
A0A0D2R3S2_GOSRA	6.5e-135	70.06	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G340600 PE=4 SV=1	[more]
A0A0D2PX45_GOSRA	4.2e-134	70.37	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G262000 PE=4 SV=1	[more]
M5WT09_PRUPE	9.4e-134	71.38	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008078mg PE=4 SV=1	[more]
W9S0J7_9ROSA	9.4e-134	71.12	RNA exonuclease 4 OS=Morus notabilis GN=L484_020501 PE=4 SV=1	[more]

BLAST of MELO3C021540 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G27970.1	3.8e-126	65.33	Exonuclease family protein	[more]
AT5G40310.1	5.0e-126	65.94	Exonuclease family protein	[more]
AT2G48100.1	2.3e-70	41.07	Exonuclease family protein	[more]
AT3G50100.1	6.5e-09	33.33	small RNA degrading nuclease 1	[more]
AT5G05540.1	6.7e-06	31.03	small RNA degrading nuclease 2	[more]

BLAST of MELO3C021540 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778708714\|ref\|XP_011656270.1\|	4.0e-178	95.89	PREDICTED: RNA exonuclease 4-like [Cucumis sativus]	[more]
gi\|659118043\|ref\|XP_008458921.1\|	9.3e-151	80.31	PREDICTED: RNA exonuclease 4 [Cucumis melo]	[more]
gi\|645249126\|ref\|XP_008230608.1\|	2.8e-139	73.23	PREDICTED: RNA exonuclease 4 [Prunus mume]	[more]
gi\|658309786\|ref\|NP_001280843.1\|	5.5e-135	71.52	RNA exonuclease 4-like [Malus domestica]	[more]
gi\|763778840\|gb\|KJB45963.1\|	9.4e-135	70.06	hypothetical protein B456_007G340600 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR013520	Exonuclease_RNaseT/DNA_pol3

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0008150	biological_process
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008408	3'-5' exonuclease activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021540T1	MELO3C021540T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 102..270 score: 1.3
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 117..264 score: 1.96
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 119..236 score: 2.
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 102..267 score: 2.9
None	No IPR available	PANTHER	PTHR12801	EXONUCLEASE	coord: 1..314 score: 5.0E
None	No IPR available	PANTHER	PTHR12801:SF56	EXONUCLEASE FAMILY PROTEIN	coord: 1..314 score: 5.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C021540	Csa5G630780	Cucumber (Chinese Long) v2	cumeB358
MELO3C021540	Cla010399	Watermelon (97103) v1	mewmB003
MELO3C021540	ClCG09G018910	Watermelon (Charleston Gray)	mewcgB002
MELO3C021540	Cla97C09G180370	Watermelon (97103) v2	mewmbB038
MELO3C021540	CSPI05G28130	Wild cucumber (PI 183967)	cpimeB349
MELO3C021540	Cucsa.159050	Cucumber (Gy14) v1	cgymeB265
MELO3C021540	CmaCh15G003330	Cucurbita maxima (Rimu)	cmameB251
MELO3C021540	CmaCh04G027120	Cucurbita maxima (Rimu)	cmameB634
MELO3C021540	CmoCh04G028420	Cucurbita moschata (Rifu)	cmomeB624
MELO3C021540	CmoCh15G003430	Cucurbita moschata (Rifu)	cmomeB239
MELO3C021540	Lsi02G015610	Bottle gourd (USVL1VR-Ls)	lsimeB162
MELO3C021540	Cp4.1LG01g23270	Cucurbita pepo (Zucchini)	cpemeB358
MELO3C021540	Cp4.1LG13g09030	Cucurbita pepo (Zucchini)	cpemeB155
MELO3C021540	CsGy5G027470	Cucumber (Gy14) v2	cgybmeB299
MELO3C021540	Carg02299	Silver-seed gourd	carmeB0260
MELO3C021540	Carg04429	Silver-seed gourd	carmeB0682
MELO3C021540	CsaV3_5G037210	Cucumber (Chinese Long) v3	cucmeB358

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021540	Wild cucumber (PI 183967)	cpimeB000
MELO3C021540	Wild cucumber (PI 183967)	cpimeB162
MELO3C021540	Cucumber (Chinese Long) v2	cumeB005
MELO3C021540	Cucumber (Chinese Long) v2	cumeB172
MELO3C021540	Watermelon (Charleston Gray)	mewcgB006
MELO3C021540	Watermelon (Charleston Gray)	mewcgB017
MELO3C021540	Watermelon (97103) v1	mewmB007
MELO3C021540	Cucurbita pepo (Zucchini)	cpemeB467
MELO3C021540	Cucurbita pepo (Zucchini)	cpemeB550
MELO3C021540	Cucurbita pepo (Zucchini)	cpemeB594
MELO3C021540	Bottle gourd (USVL1VR-Ls)	lsimeB163
MELO3C021540	Bottle gourd (USVL1VR-Ls)	lsimeB234
MELO3C021540	Cucumber (Gy14) v2	cgybmeB001
MELO3C021540	Cucumber (Gy14) v2	cgybmeB140
MELO3C021540	Silver-seed gourd	carmeB0370
MELO3C021540	Silver-seed gourd	carmeB0441
MELO3C021540	Wax gourd	mewgoB022
MELO3C021540	Cucumber (Chinese Long) v3	cucmeB000
MELO3C021540	Cucumber (Chinese Long) v3	cucmeB164
MELO3C021540	Watermelon (97103) v2	mewmbB013
MELO3C021540	Wax gourd	mewgoB002
MELO3C021540	Wax gourd	mewgoB044
MELO3C021540	Melon (DHL92) v3.5.1	memeB012
MELO3C021540	Melon (DHL92) v3.5.1	memeB013
MELO3C021540	Cucumber (Gy14) v1	cgymeB114
MELO3C021540	Cucumber (Gy14) v1	cgymeB549
MELO3C021540	Cucurbita maxima (Rimu)	cmameB081
MELO3C021540	Cucurbita maxima (Rimu)	cmameB212
MELO3C021540	Cucurbita moschata (Rifu)	cmomeB075
MELO3C021540	Cucurbita moschata (Rifu)	cmomeB196