MELO3C021523 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021523
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Cytochrome c oxidase subunit 1
Location	chr9 : 3082988 .. 3083499 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGTACTCTGAAGTTTACATCCTCATTCTGCCTAGATCCGGTATCATCAGTCATATGGTTTCTACTTTTTCGAGAAAACTGGTTTTTAGGTATCTAGGCATAGTTTATGCCATGATCAGTATAGGTGTTCTTGGATTTCTTGTTTGGGCTCATCATATGTTTACTATGGGCTTAGACGTTGATACATGTGCCTACTTCACCGCTGCTATCATGATCATAGTACTCCACACTGGAATCAAAATCTTTAGTTGGATCGCTACCATATGGGGGGTTTTGATACAATACAAAACACCCATGTTATTTGCTGTAGAATCCATCTTTTTGTTCAACATAGGAGGATTCACTAGTATAGTTTTGAAAAATTCAGGGCTAGATATTGCTCTACATGATACTTATTATGTGGTTGCACATTTCCATTATGTACTTTCTAATGGAGCCGTTTTTGCTTCATTGGACGATTTCACCATTGGATGGGTAAAATCTTTGGTCGGACATACCTTGAAACTTTAG

mRNA sequence

AGAAGTACTCTGAAGTTTACATCCTCATTCTGCCTAGATCCGGTATCATCAGTCATATGGTTTCTACTTTTTCGAGAAAACTGGTTTTTAGGTATCTAGGCATAGTTTATGCCATGATCAGTATAGGTGTTCTTGGATTTCTTGTTTGGGCTCATCATATGTTTACTATGGGCTTAGACGTTGATACATGTGCCTACTTCACCGCTGCTATCATGATCATAGTACTCCACACTGGAATCAAAATCTTTAGTTGGATCGCTACCATATGGGGGGTTTTGATACAATACAAAACACCCATGTTATTTGCTGTAGAATCCATCTTTTTGTTCAACATAGGAGGATTCACTAGTATAGTTTTGAAAAATTCAGGGCTAGATATTGCTCTACATGATACTTATTATGTGGTTGCACATTTCCATTATGTACTTTCTAATGGAGCCGTTTTTGCTTCATTGGACGATTTCACCATTGGATGGGTAAAATCTTTGGTCGGACATACCTTGAAACTTTAG

Coding sequence (CDS)

AGAAGTACTCTGAAGTTTACATCCTCATTCTGCCTAGATCCGGTATCATCAGTCATATGGTTTCTACTTTTTCGAGAAAACTGGTTTTTAGGTATCTAGGCATAGTTTATGCCATGATCAGTATAGGTGTTCTTGGATTTCTTGTTTGGGCTCATCATATGTTTACTATGGGCTTAGACGTTGATACATGTGCCTACTTCACCGCTGCTATCATGATCATAGTACTCCACACTGGAATCAAAATCTTTAGTTGGATCGCTACCATATGGGGGGTTTTGATACAATACAAAACACCCATGTTATTTGCTGTAGAATCCATCTTTTTGTTCAACATAGGAGGATTCACTAGTATAGTTTTGAAAAATTCAGGGCTAGATATTGCTCTACATGATACTTATTATGTGGTTGCACATTTCCATTATGTACTTTCTAATGGAGCCGTTTTTGCTTCATTGGACGATTTCACCATTGGATGGGTAAAATCTTTGGTCGGACATACCTTGAAACTTTAG

Protein sequence

KYSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHTLKL*

Homology

[Close]

BLAST of MELO3C021523 vs. Swiss-Prot
Match: COX1_SORBI (Cytochrome c oxidase subunit 1 OS=Sorghum bicolor GN=COX1 PE=3 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 4.2e-65
Identity = 129/165 (78.18%), Postives = 134/165 (81.21%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP  GIISH+VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 243 HPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 302

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 303 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 362

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 363 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of MELO3C021523 vs. Swiss-Prot
Match: COX1_MAIZE (Cytochrome c oxidase subunit 1 OS=Zea mays GN=COX1 PE=3 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 4.2e-65
Identity = 129/165 (78.18%), Postives = 134/165 (81.21%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP  GIISH+VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 243 HPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 302

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 303 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 362

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 363 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of MELO3C021523 vs. Swiss-Prot
Match: COX1_WHEAT (Cytochrome c oxidase subunit 1 OS=Triticum aestivum GN=COX1 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 4.2e-65
Identity = 129/165 (78.18%), Postives = 134/165 (81.21%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP  GIISH+VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 243 HPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 302

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 303 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 362

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 363 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of MELO3C021523 vs. Swiss-Prot
Match: COX1_ORYSJ (Cytochrome c oxidase subunit 1 OS=Oryza sativa subsp. japonica GN=COX1 PE=3 SV=2)

HSP 1 Score: 248.8 bits (634), Expect = 4.2e-65
Identity = 129/165 (78.18%), Postives = 134/165 (81.21%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP  GIISH+VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 243 HPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 302

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 303 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 362

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 363 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of MELO3C021523 vs. Swiss-Prot
Match: COX1_AEGCO (Cytochrome c oxidase subunit 1 OS=Aegilops columnaris GN=COX1 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 4.2e-65
Identity = 129/165 (78.18%), Postives = 134/165 (81.21%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP  GIISH+VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 243 HPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 302

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 303 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 362

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 363 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of MELO3C021523 vs. TrEMBL
Match: W4ZXC1_WHEAT (Cytochrome c oxidase subunit 1 OS=Triticum aestivum PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 9.4e-64
Identity = 130/165 (78.79%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP  GIISH+VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 243 HPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 302

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG LIQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 303 TRAYFTAATMIIAVPTGIKIFSWIATMWGGLIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 362

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 363 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of MELO3C021523 vs. TrEMBL
Match: Q5QG48_9LAMI (Cytochrome c oxidase subunit 1 (Fragment) OS=Utricularia meyeri GN=COXI PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 9.4e-64
Identity = 130/165 (78.79%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP SGIISH+VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 1   HPEVYILILPGSGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 60

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 61  TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 120

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 121 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHY-WVGKIFGRT 164

[Close]

BLAST of MELO3C021523 vs. TrEMBL
Match: O79355_9LAMI (Cytochrome c oxidase subunit 1 (Fragment) OS=Veronica subalpina GN=coxI PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 9.4e-64
Identity = 130/165 (78.79%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP SGIISH+VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 187 HPEVYILILPGSGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 246

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 247 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 306

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 307 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHY-WVGKIFGRT 350

[Close]

BLAST of MELO3C021523 vs. TrEMBL
Match: Q9MH10_9MAGN (Cytochrome c oxidase subunit 1 (Fragment) OS=Buxus sp. Qiu 94069 GN=Cox1 PE=3 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.2e-63
Identity = 129/165 (78.18%), Postives = 136/165 (82.42%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP  GIISH+VSTFS K VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 208 HPEVYILILPGFGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 267

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           TCAYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 268 TCAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 327

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 328 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYY-WVGKIFGRT 371

[Close]

BLAST of MELO3C021523 vs. TrEMBL
Match: Q94RS3_9POAL (Cytochrome c oxidase subunit 1 (Fragment) OS=Lachnocaulon anceps PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.7e-63
Identity = 129/165 (78.18%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP  GIISH+VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 165 HPEVYILILPGFGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 224

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 225 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 284

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  ++G T
Sbjct: 285 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYY-WVGKILGRT 328

[Close]

BLAST of MELO3C021523 vs. TAIR10
Match: ATMG01360.1 (ATMG01360.1 cytochrome oxidase)

HSP 1 Score: 246.1 bits (627), Expect = 1.5e-65
Identity = 128/165 (77.58%), Postives = 133/165 (80.61%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP  GIISH+VSTFS K VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 243 HPEVYILILPGFGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 302

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 303 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 362

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 363 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of MELO3C021523 vs. NCBI nr
Match: gi|46850084|gb|AAT02464.1| (cytochrome oxidase subunit I [Utricularia meyeri])

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63
Identity = 130/165 (78.79%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP SGIISH+VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 1   HPEVYILILPGSGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 60

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 61  TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 120

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 121 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHY-WVGKIFGRT 164

[Close]

BLAST of MELO3C021523 vs. NCBI nr
Match: gi|3288503|emb|CAA11324.1| (cytochrome c oxidase subunit I [Veronica subalpina])

HSP 1 Score: 251.1 bits (640), Expect = 1.3e-63
Identity = 130/165 (78.79%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP SGIISH+VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 187 HPEVYILILPGSGIISHIVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 246

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL N
Sbjct: 247 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 306

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 307 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHY-WVGKIFGRT 350

[Close]

BLAST of MELO3C021523 vs. NCBI nr
Match: gi|166165018|gb|ABY83860.1| (cytochrome oxidase subunit 1, partial (mitochondrion) [Alyxia loesneriana])

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-63
Identity = 130/165 (78.79%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP SGIISH+VSTFS K VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 239 HPEVYILILPGSGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 298

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV SIFLF IGG T IVL N
Sbjct: 299 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGSIFLFTIGGLTGIVLAN 358

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 359 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHY-WVGKIFGRT 402

[Close]

BLAST of MELO3C021523 vs. NCBI nr
Match: gi|651729771|ref|YP_009041186.1| (cytochrome c oxidase subunit 1 (mitochondrion) [Rhazya stricta])

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-63
Identity = 130/165 (78.79%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP SGIISH+VSTFS K VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 243 HPEVYILILPGSGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 302

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV SIFLF IGG T IVL N
Sbjct: 303 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGSIFLFTIGGLTGIVLAN 362

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 363 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHY-WVGKIFGRT 406

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BLAST of MELO3C021523 vs. NCBI nr
Match: gi|164685338|gb|ABY66615.1| (cytochrome oxidase subunit I, partial (mitochondrion) [Mitrastemon yamamotoi])

HSP 1 Score: 250.8 bits (639), Expect = 1.8e-63
Identity = 130/165 (78.79%), Postives = 137/165 (83.03%), Query Frame = 1


Query: 2   YSEVYILILPRSGIISHMVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVD 61
           + EVYILILP SGIISH+VSTFS K VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVD
Sbjct: 208 HPEVYILILPGSGIISHIVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVD 267

Query: 62  TCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKN 121
           T AYFTAA MII + TGIKIFSWIAT+WG  IQYKTPMLFAV SIFLF IGG T IVL N
Sbjct: 268 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGSIFLFTIGGLTGIVLAN 327

Query: 122 SGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHT 167
           SGLDIALHDTYYVVAHFHYVLS GAVFA    F   WV  + G T
Sbjct: 328 SGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFHY-WVGKIFGRT 371

The following BLAST results are available for this feature:

BLAST of MELO3C021523 vs. Swiss-Prot


Match Name	E-value	Identity	Description
COX1_SORBI	4.2e-65	78.18	Cytochrome c oxidase subunit 1 OS=Sorghum bicolor GN=COX1 PE=3 SV=2	[more]
COX1_MAIZE	4.2e-65	78.18	Cytochrome c oxidase subunit 1 OS=Zea mays GN=COX1 PE=3 SV=2	[more]
COX1_WHEAT	4.2e-65	78.18	Cytochrome c oxidase subunit 1 OS=Triticum aestivum GN=COX1 PE=3 SV=1	[more]
COX1_ORYSJ	4.2e-65	78.18	Cytochrome c oxidase subunit 1 OS=Oryza sativa subsp. japonica GN=COX1 PE=3 SV=2	[more]
COX1_AEGCO	4.2e-65	78.18	Cytochrome c oxidase subunit 1 OS=Aegilops columnaris GN=COX1 PE=3 SV=1	[more]

BLAST of MELO3C021523 vs. TrEMBL


Match Name	E-value	Identity	Description
W4ZXC1_WHEAT	9.4e-64	78.79	Cytochrome c oxidase subunit 1 OS=Triticum aestivum PE=3 SV=1	[more]
Q5QG48_9LAMI	9.4e-64	78.79	Cytochrome c oxidase subunit 1 (Fragment) OS=Utricularia meyeri GN=COXI PE=3 SV=...	[more]
O79355_9LAMI	9.4e-64	78.79	Cytochrome c oxidase subunit 1 (Fragment) OS=Veronica subalpina GN=coxI PE=3 SV=...	[more]
Q9MH10_9MAGN	1.2e-63	78.18	Cytochrome c oxidase subunit 1 (Fragment) OS=Buxus sp. Qiu 94069 GN=Cox1 PE=3 SV...	[more]
Q94RS3_9POAL	2.7e-63	78.18	Cytochrome c oxidase subunit 1 (Fragment) OS=Lachnocaulon anceps PE=3 SV=1	[more]

BLAST of MELO3C021523 vs. TAIR10


Match Name	E-value	Identity	Description
ATMG01360.1	1.5e-65	77.58	ATMG01360.1 cytochrome oxidase	[more]

BLAST of MELO3C021523 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|46850084\|gb\|AAT02464.1\|	1.3e-63	78.79	cytochrome oxidase subunit I [Utricularia meyeri]	[more]
gi\|3288503\|emb\|CAA11324.1\|	1.3e-63	78.79	cytochrome c oxidase subunit I [Veronica subalpina]	[more]
gi\|166165018\|gb\|ABY83860.1\|	1.8e-63	78.79	cytochrome oxidase subunit 1, partial (mitochondrion) [Alyxia loesneriana]	[more]
gi\|651729771\|ref\|YP_009041186.1\|	1.8e-63	78.79	cytochrome c oxidase subunit 1 (mitochondrion) [Rhazya stricta]	[more]
gi\|164685338\|gb\|ABY66615.1\|	1.8e-63	78.79	cytochrome oxidase subunit I, partial (mitochondrion) [Mitrastemon yamamotoi]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000883	Cyt_C_Oxase_1
IPR023616	Cyt_c_oxase-like_su1_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004129	cytochrome-c oxidase activity
GO:0005506	iron ion binding
GO:0009055	electron carrier activity
GO:0020037	heme binding

Vocabulary: **Biological Process**
Term	Definition
GO:0009060	aerobic respiration
GO:0055114	oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009060	aerobic respiration
biological_process	GO:1902600	hydrogen ion transmembrane transport
biological_process	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045277	respiratory chain complex IV
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021523T1	MELO3C021523T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000883	Cytochrome c oxidase subunit I	PRINTS	PR01165	CYCOXIDASEI	coord: 101..119 score: 4.7E-37coord: 66..87 score: 4.7E-37coord: 129..148 score: 4.7E-37coord: 42..57 score: 4.7
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 4..149 score: 1.2
IPR000883	Cytochrome c oxidase subunit I	PFAM	PF00115	COX1	coord: 4..151 score: 1.1
IPR023616	Cytochrome c oxidase, subunit I domain	GENE3D	G3DSA:1.20.210.10		coord: 3..167 score: 2.3
IPR023616	Cytochrome c oxidase, subunit I domain	PROFILE	PS50855	COX1	coord: 1..169 score: 35
IPR023616	Cytochrome c oxidase, subunit I domain	unknown	SSF81442	Cytochrome c oxidase subunit I-like	coord: 4..151 score: 4.06
None	No IPR available	PANTHER	PTHR10422:SF18	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 4..149 score: 1.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021523	Watermelon (97103) v2	mewmbB011
MELO3C021523	Watermelon (97103) v2	mewmbB013
MELO3C021523	Watermelon (97103) v2	mewmbB038
MELO3C021523	Melon (DHL92) v3.5.1	memeB012
MELO3C021523	Melon (DHL92) v3.5.1	memeB013
MELO3C021523	Cucumber (Gy14) v1	cgymeB114
MELO3C021523	Cucumber (Gy14) v1	cgymeB265
MELO3C021523	Cucumber (Gy14) v1	cgymeB549
MELO3C021523	Cucurbita maxima (Rimu)	cmameB081
MELO3C021523	Cucurbita maxima (Rimu)	cmameB212
MELO3C021523	Cucurbita maxima (Rimu)	cmameB251
MELO3C021523	Cucurbita maxima (Rimu)	cmameB634
MELO3C021523	Cucurbita moschata (Rifu)	cmomeB075
MELO3C021523	Cucurbita moschata (Rifu)	cmomeB196
MELO3C021523	Cucurbita moschata (Rifu)	cmomeB239
MELO3C021523	Cucurbita moschata (Rifu)	cmomeB624
MELO3C021523	Wild cucumber (PI 183967)	cpimeB000
MELO3C021523	Wild cucumber (PI 183967)	cpimeB162
MELO3C021523	Wild cucumber (PI 183967)	cpimeB349
MELO3C021523	Cucumber (Chinese Long) v2	cumeB005
MELO3C021523	Cucumber (Chinese Long) v2	cumeB172
MELO3C021523	Cucumber (Chinese Long) v2	cumeB358
MELO3C021523	Watermelon (Charleston Gray)	mewcgB002
MELO3C021523	Watermelon (Charleston Gray)	mewcgB006
MELO3C021523	Watermelon (97103) v1	mewmB003
MELO3C021523	Watermelon (97103) v1	mewmB007
MELO3C021523	Cucurbita pepo (Zucchini)	cpemeB155
MELO3C021523	Cucurbita pepo (Zucchini)	cpemeB358
MELO3C021523	Cucurbita pepo (Zucchini)	cpemeB467
MELO3C021523	Cucurbita pepo (Zucchini)	cpemeB594
MELO3C021523	Bottle gourd (USVL1VR-Ls)	lsimeB162
MELO3C021523	Bottle gourd (USVL1VR-Ls)	lsimeB163
MELO3C021523	Bottle gourd (USVL1VR-Ls)	lsimeB234
MELO3C021523	Cucumber (Gy14) v2	cgybmeB001
MELO3C021523	Cucumber (Gy14) v2	cgybmeB140
MELO3C021523	Cucumber (Gy14) v2	cgybmeB299
MELO3C021523	Silver-seed gourd	carmeB0260
MELO3C021523	Silver-seed gourd	carmeB0682
MELO3C021523	Wax gourd	mewgoB022
MELO3C021523	Cucumber (Chinese Long) v3	cucmeB000
MELO3C021523	Cucumber (Chinese Long) v3	cucmeB164
MELO3C021523	Cucumber (Chinese Long) v3	cucmeB358