MELO3C021352 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C021352
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Putative chromatin-remodeling complex ATPase chain
Location	chr11 : 27221187 .. 27222632 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATGATAGAATCATCAAGAACATAGAAAGAGGGGAAGCAAGGATTTCTCGTAAAGACGAAATAATGAAAGCCATTGGGAAGAAACTGGATCGCTACAAAAATCCATGGCTGGAGCTCAAGATCCAGTATGGCCAGAATAAAGGCAAGTTGTATAACGAAGAATGCGATCGTTTCATGGTGGGTATTGGATGTTCTGAATTCTCTCATCTGGAATGTGCCAATGTATTCTGTTGGATATCGAACATGACAAGTTTTATCTTAATGATGAACAGATATGCATGGTTCACAAGCTTGGTTACGGAAACTGGGACGAACTTAAGGCAGCATTTCGAACATCACCCTTGTTTCGATTTGATTGGTTTATCAAGTCGCGAACGACCCAAGAACTTGCGAGGAGGTGTGATACCTTAATCCGATTAGTGGAGAAAGAAAACCAGGAACATGACGAAAGGGAGAGACAGGCCCGTAAAGAAAAGAAGCTTGCGAAGGTTTTGTTCTCTATTCTTATTTTGATCAAACTTTTCTTTAATTATCTATTTGTGAAGAAAATTTTGCTGAATTTGAATTCTATTTTGTTTCAGAGTATGACACCATCAAAACGTTCCTTAGCAAGGCAGACCGAGAGCCCAACTAATCTAAAGAAGAGGAAGCAATTATCAATGGACGATTATGTAAACTCCGTAAGTTCTCCGAACGACACCATTGTCCTGTTTTGCCCAAAACTAATAAAATAGTCCTAACCCAACTTTTCTTTTGCAGGGAAAACGAAGGAAGTAACAAAATTTTTTTAAAACTTCTTTTTGGACGGGTAAGACCCATCATTTATCTTTTTTGTTGAGGCAAAACAACTGTCTGTCTGCCACATCTTTGTTTATTGCCTCTTGATTACCATCTAGAAGTACACAACCTTGAACAGGATCTGTTCCATAGTTGTACGTGTTCTTGAGTTCTACAATCTAGTTCACGTTGGTAGCTAAAATGCTTTAGAGATCCCTCCCCATATTTTTGGGATAACTTCTTGGGGATCAATTAGATTGGTAGGTGTAACTGGAAGGTCTTGTATAAAATTATTAGAGAGAACACAACTTGGTTCTGCCAATATCTTGTATGCCATAGTTGATTTTTAGTTCGAAAATATTATAATCTGTTTGGCAGATGATGTTAGTGCATCAAGGAAAAGGTTGCATCATCGGCCGCAAGACTGGTATGAAGAACAAATTAGAGTTGGACCAGAAAAGGCCGTTGACAAACTGATGACCATGTAAGGGATGTCTCATCTCATAGTAACCATTTCTGACTTTGTTTCCTAATTAAAGATTTTCTGGCTGCTAACATAACTTTATTTAGAAAATTTCAAGATTCTCTTAGCTTTACTTGAATCCCACTCTTACATGGAGTCGAGAGAAGTGAAGTAAGGTAGTGGGTATTCTAGTTTGATGATGAAT

mRNA sequence

TTATGATAGAATCATCAAGAACATAGAAAGAGGGGAAGCAAGGATTTCTCGTAAAGACGAAATAATGAAAGCCATTGGGAAGAAACTGGATCGCTACAAAAATCCATGGCTGGAGCTCAAGATCCAGTATGGCCAGAATAAAGGCAAGTTGTATAACGAAGAATGCGATCGTTTCATGATATGCATGGTTCACAAGCTTGGTTACGGAAACTGGGACGAACTTAAGGCAGCATTTCGAACATCACCCTTGTTTCGATTTGATTGGTTTATCAAGTCGCGAACGACCCAAGAACTTGCGAGGAGGTGTGATACCTTAATCCGATTAGTGGAGAAAGAAAACCAGGAACATGACGAAAGGGAGAGACAGGCCCGTAAAGAAAAGAAGCTTGCGAAGAGTATGACACCATCAAAACGTTCCTTAGCAAGGCAGACCGAGAGCCCAACTAATCTAAAGAAGAGGAAGCAATTATCAATGGACGATTATGTAAACTCCGGAAAACGAAGGAAGTAACAAAATTTTTTTAAAACTTCTTTTTGGACGGGTAAGACCCATCATTTATCTTTTTTGTTGAGGCAAAACAACTGTCTGTCTGCCACATCTTTGTTTATTGCCTCTTGATTACCATCTAGAAGTACACAACCTTGAACAGGATCTGTTCCATAGTTGTACGTGTTCTTGAGTTCTACAATCTAGTTCACGTTGGTAGCTAAAATGCTTTAGAGATCCCTCCCCATATTTTTGGGATAACTTCTTGGGGATCAATTAGATTGGTAGGTGTAACTGGAAGGTCTTGTATAAAATTATTAGAGAGAACACAACTTGGTTCTGCCAATATCTTGTATGCCATAGTTGATTTTTAGTTCGAAAATATTATAATCTGTTTGGCAGATGATGTTAGTGCATCAAGGAAAAGGTTGCATCATCGGCCGCAAGACTGGTATGAAGAACAAATTAGAGTTGGACCAGAAAAGGCCGTTGACAAACTGATGACCATGTAAGGGATGTCTCATCTCATAGTAACCATTTCTGACTTTGTTTCCTAATTAAAGATTTTCTGGCTGCTAACATAACTTTATTTAGAAAATTTCAAGATTCTCTTAGCTTTACTTGAATCCCACTCTTACATGGAGTCGAGAGAAGTGAAGTAAGGTAGTGGGTATTCTAGTTTGATGATGAAT

Coding sequence (CDS)

ATGAAAGCCATTGGGAAGAAACTGGATCGCTACAAAAATCCATGGCTGGAGCTCAAGATCCAGTATGGCCAGAATAAAGGCAAGTTGTATAACGAAGAATGCGATCGTTTCATGATATGCATGGTTCACAAGCTTGGTTACGGAAACTGGGACGAACTTAAGGCAGCATTTCGAACATCACCCTTGTTTCGATTTGATTGGTTTATCAAGTCGCGAACGACCCAAGAACTTGCGAGGAGGTGTGATACCTTAATCCGATTAGTGGAGAAAGAAAACCAGGAACATGACGAAAGGGAGAGACAGGCCCGTAAAGAAAAGAAGCTTGCGAAGAGTATGACACCATCAAAACGTTCCTTAGCAAGGCAGACCGAGAGCCCAACTAATCTAAAGAAGAGGAAGCAATTATCAATGGACGATTATGTAAACTCCGGAAAACGAAGGAAGTAA

Protein sequence

MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTSPLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLARQTESPTNLKKRKQLSMDDYVNSGKRRK*

Homology

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BLAST of MELO3C021352 vs. Swiss-Prot
Match: CHR17_ARATH (ISWI chromatin-remodeling complex ATPase CHR17 OS=Arabidopsis thaliana GN=CHR17 PE=1 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.2e-70
Identity = 133/150 (88.67%), Postives = 137/150 (91.33%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRY+NPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 923  MKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 982

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWF+KSRTTQELARRCDTLIRL+EKENQE DERERQARKEKKL+KS TPSKR   
Sbjct: 983  PLFRFDWFVKSRTTQELARRCDTLIRLIEKENQEFDERERQARKEKKLSKSATPSKRPSG 1042

Query: 121  RQ-TESPTN-LKKRKQLSMDDYVNSGKRRK 149
            RQ  ESP++ LKKRKQLSMDDY   GKRRK
Sbjct: 1043 RQANESPSSLLKKRKQLSMDDY---GKRRK 1069

[Close]

BLAST of MELO3C021352 vs. Swiss-Prot
Match: ISW2_ORYSJ (Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa subsp. japonica GN=Os01g0367900 PE=2 SV=2)

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-67
Identity = 120/152 (78.95%), Postives = 135/152 (88.82%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            M+AIGKKLDRYKNPWLELKIQYGQNKGK YNEECDRFM+CMVHKLGYGNWDELKAAFR S
Sbjct: 955  MRAIGKKLDRYKNPWLELKIQYGQNKGKFYNEECDRFMLCMVHKLGYGNWDELKAAFRMS 1014

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWF+KSRTTQELARRCDTLIRLVEKENQE+DE+ERQARK+K++AK+MTP+KRS  
Sbjct: 1015 PLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDEQERQARKDKRMAKNMTPTKRSAL 1074

Query: 121  RQTESPT----NLKKRKQLSMDDYVNSGKRRK 149
            R +E  T    + K+R+Q  MDDYV SG+R++
Sbjct: 1075 RVSEGETTPSNSFKRRRQSLMDDYVGSGRRKR 1106

[Close]

BLAST of MELO3C021352 vs. Swiss-Prot
Match: ISW2_ARATH (ISWI chromatin-remodeling complex ATPase CHR11 OS=Arabidopsis thaliana GN=CHR11 PE=1 SV=4)

HSP 1 Score: 252.7 bits (644), Expect = 2.5e-66
Identity = 121/138 (87.68%), Postives = 128/138 (92.75%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRY+NPWLELKIQYGQNKGKLYNEECDRFMICM+HKLGYGNWDELKAAFRTS
Sbjct: 918  MKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMIHKLGYGNWDELKAAFRTS 977

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
             +FRFDWF+KSRT+QELARRCDTLIRL+EKENQE DERERQARKEKKLAKS TPSKR L 
Sbjct: 978  SVFRFDWFVKSRTSQELARRCDTLIRLIEKENQEFDERERQARKEKKLAKSATPSKRPLG 1037

Query: 121  RQ-TESPTNLKKRKQLSM 138
            RQ +ESP++ KKRK LSM
Sbjct: 1038 RQASESPSSTKKRKHLSM 1055

[Close]

BLAST of MELO3C021352 vs. Swiss-Prot
Match: ISWI_DROME (Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila melanogaster GN=Iswi PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.1e-32
Identity = 72/154 (46.75%), Postives = 99/154 (64.29%), Query Frame = 1


Query: 2    KAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGN---WDELKAAFR 61
            KA+ +K+ RY+ P+ +L++QYG NKGK Y E  DRF++CM+HKLG+     ++EL+AA R
Sbjct: 874  KALDQKMSRYRAPFHQLRLQYGNNKGKNYTEIEDRFLVCMLHKLGFDKENVYEELRAAIR 933

Query: 62   TSPLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRS 121
             SP FRFDWFIKSRT  EL RRC+TLI L+E+EN E +E+ER  +K+K    S++    S
Sbjct: 934  ASPQFRFDWFIKSRTALELQRRCNTLITLIERENIELEEKERAEKKKKAPKGSVSAGSGS 993

Query: 122  LARQTESPTNLKKRKQLSMDDYV----NSGKRRK 149
             +  T +P    K  Q    + V    NS K++K
Sbjct: 994  ASSNTPAPAPQPKASQKRKSEVVATSSNSKKKKK 1027

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BLAST of MELO3C021352 vs. Swiss-Prot
Match: SMCA5_MOUSE (SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 OS=Mus musculus GN=Smarca5 PE=1 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-29
Identity = 67/139 (48.20%), Postives = 91/139 (65.47%), Query Frame = 1


Query: 2    KAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGN---WDELKAAFR 61
            KA+  K+ RYK P+ +L+I YG NKGK Y EE DRF+ICM+HKLG+     +DEL+   R
Sbjct: 918  KALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELRQCIR 977

Query: 62   TSPLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRS 121
             SP FRFDWF+KSRT  EL RRC+TLI L+E+EN E +E+E+ A K+K+  K  T  +  
Sbjct: 978  NSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEK-AEKKKRGPKPSTQKR-- 1037

Query: 122  LARQTESPTNLKKRKQLSM 138
              +   +P    ++K+L +
Sbjct: 1038 --KMDGAPDGRGRKKKLKL 1051

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BLAST of MELO3C021352 vs. TrEMBL
Match: A0A0A0KFJ8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G199780 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.7e-80
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 926  MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 985

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA
Sbjct: 986  PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 1045

Query: 121  RQTESPTNLKKRKQLSMDDYVNSGKRRK 149
            RQTESPTN+KKRKQLSMDDYVNSGKRRK
Sbjct: 1046 RQTESPTNIKKRKQLSMDDYVNSGKRRK 1073

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BLAST of MELO3C021352 vs. TrEMBL
Match: A0A067L7D7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02012 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 6.5e-77
Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 918  MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 977

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWF+KSRTTQELARRCDTLIRLVEKENQE+DERERQARKEKKLAK+MTPSKR++ 
Sbjct: 978  PLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKNMTPSKRAMG 1037

Query: 121  RQTESPTNLKKRKQLSMDDYVNSGKRRK 149
            RQTESPT+LKKRKQLSMDDYV SGKRRK
Sbjct: 1038 RQTESPTSLKKRKQLSMDDYVTSGKRRK 1065

[Close]

BLAST of MELO3C021352 vs. TrEMBL
Match: I1M1D0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G215900 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.9e-76
Identity = 139/148 (93.92%), Postives = 147/148 (99.32%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 920  MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 979

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWF+KSRTTQELARRCDTLIRLVEKENQE+DERERQARKEKKLAKSMTPSKR+LA
Sbjct: 980  PLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKSMTPSKRALA 1039

Query: 121  RQTESPTNLKKRKQLSMDDYVNSGKRRK 149
            RQTESP++LKKRKQL+MDDY ++GKRRK
Sbjct: 1040 RQTESPSSLKKRKQLTMDDYASTGKRRK 1067

[Close]

BLAST of MELO3C021352 vs. TrEMBL
Match: I1MF56_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G097000 PE=4 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 1.9e-76
Identity = 139/148 (93.92%), Postives = 147/148 (99.32%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 925  MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 984

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWF+KSRTTQELARRCDTLIRLVEKENQE+DERERQARKEKKLAKSMTPSKR+LA
Sbjct: 985  PLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKSMTPSKRALA 1044

Query: 121  RQTESPTNLKKRKQLSMDDYVNSGKRRK 149
            RQTESP++LKKRKQL+MDDY ++GKRRK
Sbjct: 1045 RQTESPSSLKKRKQLTMDDYASTGKRRK 1072

[Close]

BLAST of MELO3C021352 vs. TrEMBL
Match: B9RT10_RICCO (Helicase, putative OS=Ricinus communis GN=RCOM_0680240 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.2e-76
Identity = 138/148 (93.24%), Postives = 146/148 (98.65%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 917  MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 976

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWF+KSRTTQELARRCDTLIRLVEKENQE+DERERQARKEKKLAK+MTPSKR++ 
Sbjct: 977  PLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKNMTPSKRAIG 1036

Query: 121  RQTESPTNLKKRKQLSMDDYVNSGKRRK 149
            RQTESP +LKKRKQL+MDDYV+SGKRRK
Sbjct: 1037 RQTESPNSLKKRKQLTMDDYVSSGKRRK 1064

[Close]

BLAST of MELO3C021352 vs. TAIR10
Match: AT5G18620.2 (AT5G18620.2 chromatin remodeling factor17)

HSP 1 Score: 275.0 bits (702), Expect = 2.7e-74
Identity = 135/150 (90.00%), Postives = 140/150 (93.33%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRY+NPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 923  MKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 982

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWF+KSRTTQELARRCDTLIRL+EKENQE DERERQARKEKKL+KS TPSKR   
Sbjct: 983  PLFRFDWFVKSRTTQELARRCDTLIRLIEKENQEFDERERQARKEKKLSKSATPSKRPSG 1042

Query: 121  RQ-TESPTN-LKKRKQLSMDDYVNSGKRRK 149
            RQ  ESP++ LKKRKQLSMDDYV+SGKRRK
Sbjct: 1043 RQANESPSSLLKKRKQLSMDDYVSSGKRRK 1072

[Close]

BLAST of MELO3C021352 vs. TAIR10
Match: AT3G06400.3 (AT3G06400.3 chromatin-remodeling protein 11)

HSP 1 Score: 252.7 bits (644), Expect = 1.4e-67
Identity = 121/138 (87.68%), Postives = 128/138 (92.75%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRY+NPWLELKIQYGQNKGKLYNEECDRFMICM+HKLGYGNWDELKAAFRTS
Sbjct: 919  MKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMIHKLGYGNWDELKAAFRTS 978

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
             +FRFDWF+KSRT+QELARRCDTLIRL+EKENQE DERERQARKEKKLAKS TPSKR L 
Sbjct: 979  SVFRFDWFVKSRTSQELARRCDTLIRLIEKENQEFDERERQARKEKKLAKSATPSKRPLG 1038

Query: 121  RQ-TESPTNLKKRKQLSM 138
            RQ +ESP++ KKRK LSM
Sbjct: 1039 RQASESPSSTKKRKHLSM 1056

[Close]

BLAST of MELO3C021352 vs. NCBI nr
Match: gi|659117212|ref|XP_008458481.1| (PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X1 [Cucumis melo])

HSP 1 Score: 306.2 bits (783), Expect = 3.1e-80
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 926  MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 985

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA
Sbjct: 986  PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 1045

Query: 121  RQTESPTNLKKRKQLSMDDYVNSGKRRK 149
            RQTESPTNLKKRKQLSMDDYVNSGKRRK
Sbjct: 1046 RQTESPTNLKKRKQLSMDDYVNSGKRRK 1073

[Close]

BLAST of MELO3C021352 vs. NCBI nr
Match: gi|659117214|ref|XP_008458482.1| (PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X2 [Cucumis melo])

HSP 1 Score: 306.2 bits (783), Expect = 3.1e-80
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 925  MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 984

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA
Sbjct: 985  PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 1044

Query: 121  RQTESPTNLKKRKQLSMDDYVNSGKRRK 149
            RQTESPTNLKKRKQLSMDDYVNSGKRRK
Sbjct: 1045 RQTESPTNLKKRKQLSMDDYVNSGKRRK 1072

[Close]

BLAST of MELO3C021352 vs. NCBI nr
Match: gi|449466193|ref|XP_004150811.1| (PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X1 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 5.3e-80
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 926  MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 985

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA
Sbjct: 986  PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 1045

Query: 121  RQTESPTNLKKRKQLSMDDYVNSGKRRK 149
            RQTESPTN+KKRKQLSMDDYVNSGKRRK
Sbjct: 1046 RQTESPTNIKKRKQLSMDDYVNSGKRRK 1073

[Close]

BLAST of MELO3C021352 vs. NCBI nr
Match: gi|778714049|ref|XP_011657176.1| (PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X2 [Cucumis sativus])

HSP 1 Score: 305.4 bits (781), Expect = 5.3e-80
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 925  MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 984

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA
Sbjct: 985  PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 1044

Query: 121  RQTESPTNLKKRKQLSMDDYVNSGKRRK 149
            RQTESPTN+KKRKQLSMDDYVNSGKRRK
Sbjct: 1045 RQTESPTNIKKRKQLSMDDYVNSGKRRK 1072

[Close]

BLAST of MELO3C021352 vs. NCBI nr
Match: gi|802578174|ref|XP_012069393.1| (PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X1 [Jatropha curcas])

HSP 1 Score: 294.7 bits (753), Expect = 9.3e-77
Identity = 140/148 (94.59%), Postives = 146/148 (98.65%), Query Frame = 1


Query: 1    MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 60
            MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS
Sbjct: 918  MKAIGKKLDRYKNPWLELKIQYGQNKGKLYNEECDRFMICMVHKLGYGNWDELKAAFRTS 977

Query: 61   PLFRFDWFIKSRTTQELARRCDTLIRLVEKENQEHDERERQARKEKKLAKSMTPSKRSLA 120
            PLFRFDWF+KSRTTQELARRCDTLIRLVEKENQE+DERERQARKEKKLAK+MTPSKR++ 
Sbjct: 978  PLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEYDERERQARKEKKLAKNMTPSKRAMG 1037

Query: 121  RQTESPTNLKKRKQLSMDDYVNSGKRRK 149
            RQTESPT+LKKRKQLSMDDYV SGKRRK
Sbjct: 1038 RQTESPTSLKKRKQLSMDDYVTSGKRRK 1065

The following BLAST results are available for this feature:

BLAST of MELO3C021352 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CHR17_ARATH	2.2e-70	88.67	ISWI chromatin-remodeling complex ATPase CHR17 OS=Arabidopsis thaliana GN=CHR17 ...	[more]
ISW2_ORYSJ	2.3e-67	78.95	Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa subsp. japoni...	[more]
ISW2_ARATH	2.5e-66	87.68	ISWI chromatin-remodeling complex ATPase CHR11 OS=Arabidopsis thaliana GN=CHR11 ...	[more]
ISWI_DROME	3.1e-32	46.75	Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila melanogaster GN=Isw...	[more]
SMCA5_MOUSE	1.1e-29	48.20	SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfami...	[more]

BLAST of MELO3C021352 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFJ8_CUCSA	3.7e-80	99.32	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G199780 PE=4 SV=1	[more]
A0A067L7D7_JATCU	6.5e-77	94.59	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02012 PE=4 SV=1	[more]
I1M1D0_SOYBN	1.9e-76	93.92	Uncharacterized protein OS=Glycine max GN=GLYMA_13G215900 PE=4 SV=1	[more]
I1MF56_SOYBN	1.9e-76	93.92	Uncharacterized protein OS=Glycine max GN=GLYMA_15G097000 PE=4 SV=2	[more]
B9RT10_RICCO	4.2e-76	93.24	Helicase, putative OS=Ricinus communis GN=RCOM_0680240 PE=4 SV=1	[more]

BLAST of MELO3C021352 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G18620.2	2.7e-74	90.00	chromatin remodeling factor17	[more]
AT3G06400.3	1.4e-67	87.68	chromatin-remodeling protein 11	[more]

BLAST of MELO3C021352 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659117212\|ref\|XP_008458481.1\|	3.1e-80	100.00	PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X1 [Cucumi...	[more]
gi\|659117214\|ref\|XP_008458482.1\|	3.1e-80	100.00	PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X2 [Cucumi...	[more]
gi\|449466193\|ref\|XP_004150811.1\|	5.3e-80	99.32	PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X1 [Cucumi...	[more]
gi\|778714049\|ref\|XP_011657176.1\|	5.3e-80	99.32	PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X2 [Cucumi...	[more]
gi\|802578174\|ref\|XP_012069393.1\|	9.3e-77	94.59	PREDICTED: putative chromatin-remodeling complex ATPase chain isoform X1 [Jatrop...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR015195	SLIDE

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676	nucleic acid binding
GO:0005524	ATP binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

Vocabulary: **Biological Process**
Term	Definition
GO:0006338	chromatin remodeling

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043044	ATP-dependent chromatin remodeling
biological_process	GO:0008152	metabolic process
biological_process	GO:0006338	chromatin remodeling
cellular_component	GO:0000785	chromatin
cellular_component	GO:0016589	NURF complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0031491	nucleosome binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
molecular_function	GO:0003676	nucleic acid binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU57150	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C021352T1	MELO3C021352T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU57150	MU57150	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 12..111 score: 9.1
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 2..101 score: 1.94
IPR015195	SLIDE domain	PFAM	PF09111	SLIDE	coord: 2..91 score: 1.6
None	No IPR available	unknown	Coil	Coil	coord: 85..108 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C021352	Cucumber (Gy14) v2	cgybmeB149
MELO3C021352	Cucumber (Gy14) v2	cgybmeB386
MELO3C021352	Silver-seed gourd	carmeB0067
MELO3C021352	Silver-seed gourd	carmeB0327
MELO3C021352	Silver-seed gourd	carmeB0609
MELO3C021352	Silver-seed gourd	carmeB0827
MELO3C021352	Cucumber (Chinese Long) v3	cucmeB176
MELO3C021352	Cucumber (Chinese Long) v3	cucmeB450
MELO3C021352	Watermelon (97103) v2	mewmbB123
MELO3C021352	Watermelon (97103) v2	mewmbB128
MELO3C021352	Watermelon (97103) v2	mewmbB132
MELO3C021352	Wax gourd	mewgoB101
MELO3C021352	Wax gourd	mewgoB105
MELO3C021352	Melon (DHL92) v3.5.1	memeB051
MELO3C021352	Cucumber (Gy14) v1	cgymeB305
MELO3C021352	Cucumber (Gy14) v1	cgymeB430
MELO3C021352	Cucurbita maxima (Rimu)	cmameB215
MELO3C021352	Cucurbita maxima (Rimu)	cmameB313
MELO3C021352	Cucurbita maxima (Rimu)	cmameB747
MELO3C021352	Cucurbita maxima (Rimu)	cmameB816
MELO3C021352	Cucurbita moschata (Rifu)	cmomeB200
MELO3C021352	Cucurbita moschata (Rifu)	cmomeB306
MELO3C021352	Cucurbita moschata (Rifu)	cmomeB738
MELO3C021352	Cucurbita moschata (Rifu)	cmomeB800
MELO3C021352	Wild cucumber (PI 183967)	cpimeB174
MELO3C021352	Wild cucumber (PI 183967)	cpimeB439
MELO3C021352	Cucumber (Chinese Long) v2	cumeB180
MELO3C021352	Cucumber (Chinese Long) v2	cumeB440
MELO3C021352	Cucumber (Chinese Long) v2	cumeB447
MELO3C021352	Watermelon (Charleston Gray)	mewcgB121
MELO3C021352	Watermelon (Charleston Gray)	mewcgB124
MELO3C021352	Watermelon (97103) v1	mewmB088
MELO3C021352	Watermelon (97103) v1	mewmB096
MELO3C021352	Watermelon (97103) v1	mewmB141
MELO3C021352	Cucurbita pepo (Zucchini)	cpemeB112
MELO3C021352	Cucurbita pepo (Zucchini)	cpemeB283
MELO3C021352	Cucurbita pepo (Zucchini)	cpemeB289
MELO3C021352	Cucurbita pepo (Zucchini)	cpemeB555
MELO3C021352	Cucurbita pepo (Zucchini)	cpemeB793
MELO3C021352	Bottle gourd (USVL1VR-Ls)	lsimeB017
MELO3C021352	Bottle gourd (USVL1VR-Ls)	lsimeB342