MELO3C021277 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C021277
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative 60S ribosomal protein L29
Locationchr11 : 27825919 .. 27827095 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTGAGCTCGTTCAAATTCCTCGCTTCTTCATCTTCTCTTCGATTTCTTCTCCAATCTCTGTTGTGCTTTCCGTTCAGAAATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCTACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACAAAAGGGGTATGCGATTTTCTCTTACAATCACTTCTGTTCCTGTTGAATCCATTGTGTTTCATTTTAATTTGTTTTAAGTCTCGTCAATTTTTATAGATGGATCCGAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAAATGCTTCTGGGGAAGAGTAAAGTAGCCGCCGCCAAGTTTAGGGTTTTTATTATTCAAATTTTTGTTATTGCTCTTGTTTTTGTTCAGTAGTCTTGATATTTGACTCAATTTGGAGACTTTTGCGTCTGAGGCATATTTTACGAAAATACATTATCTGATTTGCAATTTTAAAGCTTCTACTGTTGATTACATCTTCATCCCTTATCATCTTGTTTAATGATGGGTTTAATTGCAACTTCATTTTCCATCATTGAATTTTCTATTTTGTATGTCTTGACAAGAGGACCAAATTCCCAAACTTCAAAGATTTGAAATTTGACACAATATTTTCAATGGTGTAAATCTTGCTACAAAGCATGTTATAATGGGATGTGGTTTTTGATTTACTGGGCAGCAAGCTTCATATAAATCAAGCAAACTAGTATAAACCTTATATCATGAGTTGGTCCTATAGGGCGACGACTTTGATATTGTATTGTGGATTCTATGGTAGCCTTCAGTTACCTTAGAGTATCAAATGTGGCAGGGTCATGTGGTTGTTCTCGTTAAGATATTATAAAAGAATAGAGCTTCGTAAGTTGGACTCGTAGATGTTTGGATGGAACTGAGTCTGGGCGCTGAGCGAGAATTTCCATCAAGAAGATGCGACAGGACAGGGTATTGGACCTTGCTGCCAGTTCCACTAAGATTCAGTTTGCAATTCAACCCTCTAGGAAAGATGTTTGGGTGCAACTCTTAGAGCTCTCTGTCGATGTTTGGATGAAACTTCCTTGTAACCTCTTTCTCTAATGGGTTTTTAGGACTAATTCTTGCTGTCTCGTGCTAATGGAATATGCTTTTC

mRNA sequence

ATTGAGCTCGTTCAAATTCCTCGCTTCTTCATCTTCTCTTCGATTTCTTCTCCAATCTCTGTTGTGCTTTCCGTTCAGAAATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCTACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACAAAAGGGATGGATCCGAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAAATGCTTCTGGGGAAGAGTAAAGTAGCCGCCGCCAAGTTTAGGGTTTTTATTATTCAAATTTTTGTTATTGCTCTTGTTTTTGTTCAGTAGTCTTGATATTTGACTCAATTTGGAGACTTTTGCGTCTGAGGCATATTTTACGAAAATACATTATCTGATTTGCAATTTTAAAGCTTCTACTGTTGATTACATCTTCATCCCTTATCATCTTGTTTAATGATGGGTTTAATTGCAACTTCATTTTCCATCATTGAATTTTCTATTTTGTATGTCTTGACAAGAGGACCAAATTCCCAAACTTCAAAGATTTGAAATTTGACACAATATTTTCAATGGTGTAAATCTTGCTACAAAGCATGTTATAATGGGATGTGGTTTTTGATTTACTGGGCAGCAAGCTTCATATAAATCAAGCAAACTAGTATAAACCTTATATCATGAGTTGGTCCTATAGGGCGACGACTTTGATATTGTATTGTGGATTCTATGGTAGCCTTCAGTTACCTTAGAGTATCAAATGTGGCAGGGTCATGTGGTTGTTCTCGTTAAGATATTATAAAAGAATAGAGCTTCGTAAGTTGGACTCGTAGATGTTTGGATGGAACTGAGTCTGGGCGCTGAGCGAGAATTTCCATCAAGAAGATGCGACAGGACAGGGTATTGGACCTTGCTGCCAGTTCCACTAAGATTCAGTTTGCAATTCAACCCTCTAGGAAAGATGTTTGGGTGCAACTCTTAGAGCTCTCTGTCGATGTTTGGATGAAACTTCCTTGTAACCTCTTTCTCTAATGGGTTTTTAGGACTAATTCTTGCTGTCTCGTGCTAATGGAATATGCTTTTC

Coding sequence (CDS)

ATGGCGAAGTCGAAGAATCACACAGCTCACAATCAGTCCTACAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACAAAAGGGATGGATCCGAAGTTCCTTAGGAACCAGAGGTACGCGAAGAAACACAATACCAAGAGTGGGGAAAATGCTTCTGGGGAAGAGTAA

Protein sequence

MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGEE*
Homology
[Close]
BLAST of MELO3C021277 vs. Swiss-Prot
Match: RL291_ARATH (60S ribosomal protein L29-1 OS=Arabidopsis thaliana GN=RPL29A PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 4.1e-26
Identity = 53/61 (86.89%), Postives = 55/61 (90.16%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of MELO3C021277 vs. Swiss-Prot
Match: RL292_ARATH (60S ribosomal protein L29-2 OS=Arabidopsis thaliana GN=RPL29B PE=2 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 1.2e-25
Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of MELO3C021277 vs. Swiss-Prot
Match: RL29_BOVIN (60S ribosomal protein L29 OS=Bos taurus GN=RPL29 PE=2 SV=3)

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-16
Identity = 39/52 (75.00%), Postives = 41/52 (78.85%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK 53
          MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]
BLAST of MELO3C021277 vs. Swiss-Prot
Match: RL29_HUMAN (60S ribosomal protein L29 OS=Homo sapiens GN=RPL29 PE=1 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-16
Identity = 39/52 (75.00%), Postives = 41/52 (78.85%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK 53
          MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]
BLAST of MELO3C021277 vs. Swiss-Prot
Match: RL29_MACFA (60S ribosomal protein L29 OS=Macaca fascicularis GN=RPL29 PE=2 SV=3)

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-16
Identity = 39/52 (75.00%), Postives = 41/52 (78.85%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTK 53
          MAKSKNHT HNQS K H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]
BLAST of MELO3C021277 vs. TrEMBL
Match: A0A0A0KCX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G309950 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 8.8e-28
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE
Sbjct: 1  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of MELO3C021277 vs. TrEMBL
Match: V9HZW1_IPOBA (Putative 60S ribosomal protein L29 OS=Ipomoea batatas GN=RPL29 PE=2 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 4.8e-26
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYA+KHN KSGE  SGE
Sbjct: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYARKHNNKSGEAGSGE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of MELO3C021277 vs. TrEMBL
Match: V7B091_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G112200g PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 5.3e-25
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQSYKAHKNGIKKP++HRHTSTKGMDPKFLRNQRYA+KHN KSGE AS E
Sbjct: 1  MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETASEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of MELO3C021277 vs. TrEMBL
Match: A5BSZ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01220 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 7.0e-25
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQSYKAHKNGIKKPRKHRH STKGMDPKFLRNQRYA+KHN KSGE+A+ E
Sbjct: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHASTKGMDPKFLRNQRYARKHNKKSGESATEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of MELO3C021277 vs. TrEMBL
Match: A0A0D2UVF7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G198800 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 9.1e-25
Identity = 54/61 (88.52%), Postives = 59/61 (96.72%), Query Frame = 1 

Query: 1   MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
           MAKSKNHTAHNQSYKAHKNGIKKP++HRHTSTKGMDPKFLRNQRYA+KHN KSGE+A+ E
Sbjct: 86  MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGESATEE 145

Query: 61  E 62
           E
Sbjct: 146 E 146

[Close]
BLAST of MELO3C021277 vs. TAIR10
Match: AT3G06700.1 (AT3G06700.1 Ribosomal L29e protein family)

HSP 1 Score: 117.9 bits (294), Expect = 2.3e-27
Identity = 53/61 (86.89%), Postives = 55/61 (90.16%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GENAS E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of MELO3C021277 vs. TAIR10
Match: AT3G06680.1 (AT3G06680.1 Ribosomal L29e protein family)

HSP 1 Score: 116.3 bits (290), Expect = 6.7e-27
Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGENA  E
Sbjct: 23 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 82

Query: 61 E 62
          E
Sbjct: 83 E 83

[Close]
BLAST of MELO3C021277 vs. NCBI nr
Match: gi|659116998|ref|XP_008458370.1| (PREDICTED: 60S ribosomal protein L29-1 [Cucumis melo])

HSP 1 Score: 132.1 bits (331), Expect = 3.3e-28
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE
Sbjct: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of MELO3C021277 vs. NCBI nr
Match: gi|778714624|ref|XP_011657268.1| (PREDICTED: 60S ribosomal protein L29-1 [Cucumis sativus])

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-27
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQS+KAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE
Sbjct: 1  MAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of MELO3C021277 vs. NCBI nr
Match: gi|659117000|ref|XP_008458371.1| (PREDICTED: 60S ribosomal protein L29-1-like [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-27
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHN KSGENASGE
Sbjct: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASGE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of MELO3C021277 vs. NCBI nr
Match: gi|729325045|ref|XP_010534701.1| (PREDICTED: 60S ribosomal protein L29-1 [Tarenaya hassleriana])

HSP 1 Score: 126.3 bits (316), Expect = 1.8e-26
Identity = 57/61 (93.44%), Postives = 61/61 (100.00%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQS+KAHKNGIKKPR+HRHTSTKGMDPKFLRNQRYA+KHN+KSGENASGE
Sbjct: 1  MAKSKNHTAHNQSHKAHKNGIKKPRRHRHTSTKGMDPKFLRNQRYARKHNSKSGENASGE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]
BLAST of MELO3C021277 vs. NCBI nr
Match: gi|317134435|gb|ADV02780.1| (putative 60S ribosomal protein L29 [Ipomoea batatas])

HSP 1 Score: 124.4 bits (311), Expect = 6.9e-26
Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 1 

Query: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNTKSGENASGE 60
          MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYA+KHN KSGE  SGE
Sbjct: 1  MAKSKNHTAHNQSYKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYARKHNNKSGEAGSGE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

The following BLAST results are available for this feature:
BLAST of MELO3C021277 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL291_ARATH4.1e-2686.8960S ribosomal protein L29-1 OS=Arabidopsis thaliana GN=RPL29A PE=1 SV=1[more]
RL292_ARATH1.2e-2586.8960S ribosomal protein L29-2 OS=Arabidopsis thaliana GN=RPL29B PE=2 SV=2[more]
RL29_BOVIN1.0e-1675.0060S ribosomal protein L29 OS=Bos taurus GN=RPL29 PE=2 SV=3[more]
RL29_HUMAN1.0e-1675.0060S ribosomal protein L29 OS=Homo sapiens GN=RPL29 PE=1 SV=2[more]
RL29_MACFA1.0e-1675.0060S ribosomal protein L29 OS=Macaca fascicularis GN=RPL29 PE=2 SV=3[more]
BLAST of MELO3C021277 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KCX6_CUCSA8.8e-2898.36Uncharacterized protein OS=Cucumis sativus GN=Csa_6G309950 PE=4 SV=1[more]
V9HZW1_IPOBA4.8e-2693.44Putative 60S ribosomal protein L29 OS=Ipomoea batatas GN=RPL29 PE=2 SV=1[more]
V7B091_PHAVU5.3e-2590.16Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G112200g PE=4 SV=1[more]
A5BSZ9_VITVI7.0e-2590.16Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0077g01220 PE=4 SV=... [more]
A0A0D2UVF7_GOSRA9.1e-2588.52Uncharacterized protein OS=Gossypium raimondii GN=B456_011G198800 PE=4 SV=1[more]
BLAST of MELO3C021277 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G06700.12.3e-2786.89 Ribosomal L29e protein family[more]
AT3G06680.16.7e-2786.89 Ribosomal L29e protein family[more]
BLAST of MELO3C021277 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659116998|ref|XP_008458370.1|3.3e-28100.00PREDICTED: 60S ribosomal protein L29-1 [Cucumis melo][more]
gi|778714624|ref|XP_011657268.1|1.3e-2798.36PREDICTED: 60S ribosomal protein L29-1 [Cucumis sativus][more]
gi|659117000|ref|XP_008458371.1|1.3e-2798.36PREDICTED: 60S ribosomal protein L29-1-like [Cucumis melo][more]
gi|729325045|ref|XP_010534701.1|1.8e-2693.44PREDICTED: 60S ribosomal protein L29-1 [Tarenaya hassleriana][more]
gi|317134435|gb|ADV02780.1|6.9e-2693.44putative 60S ribosomal protein L29 [Ipomoea batatas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002673Ribosomal_L29e
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU44013melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C021277T1MELO3C021277T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU44013MU44013transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002673Ribosomal protein L29ePRODOMPD010314coord: 1..52
score: 1.0
IPR002673Ribosomal protein L29ePANTHERPTHR1288460S RIBOSOMAL PROTEIN L29coord: 2..61
score: 3.2
IPR002673Ribosomal protein L29ePFAMPF01779Ribosomal_L29ecoord: 3..42
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C021277Cucurbita moschata (Rifu)cmomeB200
MELO3C021277Cucurbita moschata (Rifu)cmomeB306
MELO3C021277Cucurbita moschata (Rifu)cmomeB800
MELO3C021277Wild cucumber (PI 183967)cpimeB174
MELO3C021277Wild cucumber (PI 183967)cpimeB435
MELO3C021277Cucumber (Chinese Long) v2cumeB180
MELO3C021277Cucumber (Chinese Long) v2cumeB445
MELO3C021277Watermelon (Charleston Gray)mewcgB078
MELO3C021277Watermelon (Charleston Gray)mewcgB121
MELO3C021277Watermelon (Charleston Gray)mewcgB124
MELO3C021277Watermelon (97103) v1mewmB090
MELO3C021277Watermelon (97103) v1mewmB096
MELO3C021277Watermelon (97103) v1mewmB141
MELO3C021277Cucurbita pepo (Zucchini)cpemeB112
MELO3C021277Cucurbita pepo (Zucchini)cpemeB283
MELO3C021277Cucurbita pepo (Zucchini)cpemeB555
MELO3C021277Cucurbita pepo (Zucchini)cpemeB793
MELO3C021277Bottle gourd (USVL1VR-Ls)lsimeB017
MELO3C021277Bottle gourd (USVL1VR-Ls)lsimeB240
MELO3C021277Bottle gourd (USVL1VR-Ls)lsimeB342
MELO3C021277Cucumber (Gy14) v2cgybmeB149
MELO3C021277Cucumber (Gy14) v2cgybmeB382
MELO3C021277Silver-seed gourdcarmeB0067
MELO3C021277Silver-seed gourdcarmeB0279
MELO3C021277Silver-seed gourdcarmeB0700
MELO3C021277Cucumber (Chinese Long) v3cucmeB176
MELO3C021277Cucumber (Chinese Long) v3cucmeB447
MELO3C021277Watermelon (97103) v2mewmbB085
MELO3C021277Watermelon (97103) v2mewmbB123
MELO3C021277Watermelon (97103) v2mewmbB128
MELO3C021277Wax gourdmewgoB094
MELO3C021277Wax gourdmewgoB105
MELO3C021277Melon (DHL92) v3.5.1memeB051
MELO3C021277Cucumber (Gy14) v1cgymeB430
MELO3C021277Cucurbita maxima (Rimu)cmameB313
MELO3C021277Cucurbita maxima (Rimu)cmameB747
MELO3C021277Cucurbita maxima (Rimu)cmameB816