MELO3C020882.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C020882.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptionthioredoxin-like protein YLS8
Locationchr11 : 3275016 .. 3277572 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGATCATTATGTTTGTGGAAACTTGGAAGCCGTCTTTCGTACTTCGTGTTCGTGGGTCTCCTCTCCTTCGTTCATTTTCATTCGTGAGTTTCGTACCTCGTGTTCGTGGGTTTCGTTTTCACAGTAGCTCCCGACGGTGTACTGCTGCACCATCCGACGGGACCAACAATTCAAATCGCTTAATTCTTTCGACCCACTCTCCGATCGATCTCAATTCTTGACACCCACGATCTCACGGCTGCAGATCTGCAAGTTTTAACGCCTTTGAACGCAGTTCATCAAGCTCAAGCTCGTTTGGTGAGAAATAGTGAGTAACGATTTACTCTAAACCACTTTCGGACTTTTTTTTTAAGTGTTTTAATTTAGGTTTTAGCCCTTGAAACTATGCTTTTTTGTGGTCTCGAATCGTTCAAACAGGTTGCAAAGGTGTTTAAGGCTAACTTTGGGTTAAAAAAAAAGGAATTGTTACCATCTCCTGAACAACTTTTCCGATTTGATTGAGGATTTCAATCTGTTTTTTAACCCTGGAATCTTGTTTTTCTTGTTTCAAGAGCTAAGAGCGCTTTGATTTAAACTGTGTGCTACTACCAGCTGCTATGTTTTCCGGTGTCATGTTGGGTTATGCTCCTGTGACGTTAAGCGTGTTGTTATATCTAGATTTTCTGAAACTATAGGATAGTGTGATATTTTTTTGCTCAAGTTCATGGAGTTATATGGTTAGAATCTGATCTGGAGAACATGTTTTAGGATGTTCATACTTGGGTTTACTGTGAGACTGAATTGTGAAAGAGGTCTCAGAGGACCTTGGGTTTATGATAAAGGAAAGTGAGGGCAATAGTAGGGCCTCAGACGTAAATGGTCGAGGCATAGTATTGTGTTTAAGAAAGTAATAAAGAAGATTAGAGGTTCATATATAAATTGTTGAATAATGGTATTATGATTGGGTAAGTAAGTGAATATCATAGCCTGGGTCCTTGGGATGGAAAAATGGTCGATGGAAAATGTGTCACTCTTTGATAATGAGACTTCAGGATAAAGCATTGTAGCCTTTGGTATAATTGGTCAAAGGTCAGTGTGATGAGTCTTGAGGCAGATATTGGGGCTTTCAGTATATATGAATATATGATTGAGGGCCAATACATTGTTGAGTCATTAAGTTTTTGGGTGTAAATGGTCAAGGAACTTGAGGCCTGAGGTATAAATAGTTTAGGATCAAACATTGAGTTCTTTAGAGCAGTGTGGAAGCGTTTGGTAAGAGTTTGATAAGGGAGAATGCTAGAAAGAGTCGTGGTGGACTCGGTGATGTTTGAGAAAGTTTAGGATGAGCATGCATGATGATATAATTAAGACCACGAGTTGAATAAGTCAATAAAGTCACACATATTACTCATTTTCATATATGTTGTATTGTATATGAATAACTTATTTGAGAAGCATGTTGTGATGTATGTTATATGTTGTTTGTCACTCGTTAGGTGGAAGCTAGTTACTGAGCAAGAGATGTCGTACTTGCTGCCACATCTTCATTCAGGATGGGCTGTTGACCAAGCAATCCTTGCAGAAGAAGAGCGTCTTGTGGTCATTCGTTTTGGTCATGATTGGGATGAAACTTGTATGCAGGTCTTTACCTCTTCCATTTCATAATCTTCCATTCCTCTTTCTCAGCATAATTGGTTCATCATCAAATTTAATGTTGACCATGTTGTGTCTCTCTCTCTGAAATTCTCTATTCTTCTTCTTGCTTCCAATGAACTGAATTTATTTTGTTCTGGTCTTTAGTTTCACAAAAGAAGTTTCTATTATCATCGTGTGTTCCCGACACGTTATGCATTCCTACTTGTTTTTAGTATGTAGTATGTACCAAAGATGAAGTTCCTTCATCCCAGTTATGAACTATGATTTTCCCTCTTTTTATGTTAAATATGATTACAGTTCTTCTATCTTACATGTTCAAGATTGGGAAGATGAAGATCCTTAAGTTTCTTTTTTCTTTTTGAGATGTTTCATCTGATTGAGATGCTTTTGTTCTAGATGGATGAAGTGTTGGCCTCAGTGGCAGAGACGATTAAGAACTTTGCTGTAATATACCTTGTGGATATCACAGAGGTTCCCGACTTCAACACAATGTACGAGCTGTATGATCCTTCCACCGTTATGTTTTTCTTTAGGAACAAGCACATAATGATTGATCTTGGAACTGGAAACAACAATAAGATAAACTGGGCACTTAAGGACAAGCAGGAGTTCATTGATATCATTGAAACAGTCTACCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCTAAGGACTATTCAACCAAATATCGCTACTAAGATTTTCTGCTGCATCTAAAACTCCTTATTCATCTTAAATATTATGTCCTATATGACATTAATAACCTCCTAAAAAAAGTTATGGTTGATTCAGGCATATTAAGTTACTACCTTGTTTGTGAATAAAAGTGTATGATACACAATTTTAACGTTTATTTGTAATACTGAATTGAATCTTAATTATGCTATCTATGATTGGATATACTTTGTCTTTT

mRNA sequence

ATCGATCATTATGTTTGTGGAAACTTGGAAGCCGTCTTTCGTACTTCGTGTTCGTGGGTCTCCTCTCCTTCGTTCATTTTCATTCGTGAGTTTCGTACCTCGTGTTCGTGGGTTTCGTTTTCACAGTAGCTCCCGACGGTGTACTGCTGCACCATCCGACGGGACCAACAATTCAAATCGCTTAATTCTTTCGACCCACTCTCCGATCGATCTCAATTCTTGACACCCACGATCTCACGGCTGCAGATCTGCAAGTTTTAACGCCTTTGAACGCAGTTCATCAAGCTCAAGCTCGTTTGGTGAGAAATAGTGGAAGCTAGTTACTGAGCAAGAGATGTCGTACTTGCTGCCACATCTTCATTCAGGATGGGCTGTTGACCAAGCAATCCTTGCAGAAGAAGAGCGTCTTGTGGTCATTCGTTTTGGTCATGATTGGGATGAAACTTGTATGCAGATGGATGAAGTGTTGGCCTCAGTGGCAGAGACGATTAAGAACTTTGCTGTAATATACCTTGTGGATATCACAGAGGTTCCCGACTTCAACACAATGTACGAGCTGTATGATCCTTCCACCGTTATGTTTTTCTTTAGGAACAAGCACATAATGATTGATCTTGGAACTGGAAACAACAATAAGATAAACTGGGCACTTAAGGACAAGCAGGAGTTCATTGATATCATTGAAACAGTCTACCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCTAAGGACTATTCAACCAAATATCGCTACTAAGATTTTCTGCTGCATCTAAAACTCCTTATTCATCTTAAATATTATGTCCTATATGACATTAATAACCTCCTAAAAAAAGTTATGGTTGATTCAGGCATATTAAGTTACTACCTTGTTTGTGAATAAAAGTGTATGATACACAATTTTAACGTTTATTTGTAATACTGAATTGAATCTTAATTATGCTATCTATGATTGGATATACTTTGTCTTTT

Coding sequence (CDS)

ATGTCGTACTTGCTGCCACATCTTCATTCAGGATGGGCTGTTGACCAAGCAATCCTTGCAGAAGAAGAGCGTCTTGTGGTCATTCGTTTTGGTCATGATTGGGATGAAACTTGTATGCAGATGGATGAAGTGTTGGCCTCAGTGGCAGAGACGATTAAGAACTTTGCTGTAATATACCTTGTGGATATCACAGAGGTTCCCGACTTCAACACAATGTACGAGCTGTATGATCCTTCCACCGTTATGTTTTTCTTTAGGAACAAGCACATAATGATTGATCTTGGAACTGGAAACAACAATAAGATAAACTGGGCACTTAAGGACAAGCAGGAGTTCATTGATATCATTGAAACAGTCTACCGTGGAGCAAGGAAAGGACGTGGTTTAGTCATTGCACCTAAGGACTATTCAACCAAATATCGCTACTAA

Protein sequence

MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLVDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVYRGARKGRGLVIAPKDYSTKYRY
BLAST of MELO3C020882.2 vs. NCBI nr
Match: XP_004148041.1 (PREDICTED: thioredoxin-like protein YLS8 [Cucumis sativus] >XP_004497782.1 PREDICTED: thioredoxin-like protein YLS8 [Cicer arietinum] >XP_006288859.1 thioredoxin-like protein YLS8 [Capsella rubella] >XP_006399318.1 thioredoxin-like protein YLS8 [Eutrema salsugineum] >XP_008457801.1 PREDICTED: thioredoxin-like protein YLS8 [Cucumis melo] >XP_010452811.1 PREDICTED: thioredoxin-like protein YLS8 [Camelina sativa] >XP_010491455.1 PREDICTED: thioredoxin-like protein YLS8 [Camelina sativa] >XP_012459864.1 PREDICTED: thioredoxin-like protein YLS8 [Gossypium raimondii] >XP_015894288.1 thioredoxin-like protein YLS8 [Ziziphus jujuba] >XP_015961428.1 thioredoxin-like protein YLS8 isoform X1 [Arachis duranensis] >XP_015961429.1 thioredoxin-like protein YLS8 isoform X1 [Arachis duranensis] >XP_016198827.1 thioredoxin-like protein YLS8 isoform X1 [Arachis ipaensis] >XP_016198828.1 thioredoxin-like protein YLS8 isoform X1 [Arachis ipaensis] >XP_016198829.1 thioredoxin-like protein YLS8 isoform X1 [Arachis ipaensis] >XP_016198830.1 thioredoxin-like protein YLS8 isoform X1 [Arachis ipaensis] >XP_016198831.1 thioredoxin-like protein YLS8 isoform X1 [Arachis ipaensis] >XP_016734252.1 PREDICTED: thioredoxin-like protein YLS8 [Gossypium hirsutum] >XP_016734292.1 PREDICTED: thioredoxin-like protein YLS8 [Gossypium hirsutum] >XP_017612852.1 PREDICTED: thioredoxin-like protein YLS8 [Gossypium arboreum] >XP_019420159.1 PREDICTED: thioredoxin-like protein YLS8 [Lupinus angustifolius] >XP_019439280.1 PREDICTED: thioredoxin-like protein YLS8 [Lupinus angustifolius] >XP_021632944.1 thioredoxin-like protein YLS8 [Manihot esculenta] >XP_021674120.1 thioredoxin-like protein YLS8 [Hevea brasiliensis] >XP_021674917.1 thioredoxin-like protein YLS8 [Hevea brasiliensis] >XP_022139323.1 thioredoxin-like protein YLS8 isoform X1 [Momordica charantia] >XP_022153368.1 thioredoxin-like protein YLS8 [Momordica charantia] >XP_022153369.1 thioredoxin-like protein YLS8 [Momordica charantia] >XP_022927978.1 thioredoxin-like protein YLS8 [Cucurbita moschata] >XP_022927979.1 thioredoxin-like protein YLS8 [Cucurbita moschata] >XP_022971679.1 thioredoxin-like protein YLS8 [Cucurbita maxima] >XP_022971680.1 thioredoxin-like protein YLS8 [Cucurbita maxima] >XP_023513106.1 thioredoxin-like protein YLS8 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513107.1 thioredoxin-like protein YLS8 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023513108.1 thioredoxin-like protein YLS8 isoform X1 [Cucurbita pepo subsp. pepo] >XP_024007091.1 thioredoxin-like protein YLS8 [Eutrema salsugineum] >XP_025695902.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_025695903.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_025649101.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_025649102.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_025649103.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >XP_025649104.1 thioredoxin-like protein YLS8 [Arachis hypogaea] >ADV04065.1 mitosis protein YLS8 [Hevea brasiliensis] >AGH25793.1 YLS8 [Gossypium hirsutum] >EOA21757.1 hypothetical protein CARUB_v10002214mg [Capsella rubella] >ESQ40771.1 hypothetical protein EUTSA_v10014963mg [Eutrema salsugineum] >KGN62024.1 hypothetical protein Csa_2G287060 [Cucumis sativus] >KHG03038.1 Thioredoxin-like protein 4A [Gossypium arboreum] >OAY33298.1 hypothetical protein MANES_13G084100 [Manihot esculenta] >OIV95198.1 hypothetical protein TanjilG_21588 [Lupinus angustifolius] >OIW14294.1 hypothetical protein TanjilG_21434 [Lupinus angustifolius] >OVA18434.1 mRNA splicing factor [Macleaya cordata])

HSP 1 Score: 296.2 bits (757), Expect = 5.9e-77
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142

BLAST of MELO3C020882.2 vs. NCBI nr
Match: KJB77370.1 (hypothetical protein B456_012G134400 [Gossypium raimondii])

HSP 1 Score: 296.2 bits (757), Expect = 5.9e-77
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 66  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 125

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 126 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 185

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 186 RGARKGRGLVIAPKDYSTKYRY 207

BLAST of MELO3C020882.2 vs. NCBI nr
Match: PPS03745.1 (hypothetical protein GOBAR_AA16917 [Gossypium barbadense])

HSP 1 Score: 296.2 bits (757), Expect = 5.9e-77
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 66  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 125

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 126 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 185

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 186 RGARKGRGLVIAPKDYSTKYRY 207

BLAST of MELO3C020882.2 vs. NCBI nr
Match: NP_001341033.1 (DIM 1-like protein [Glycine max] >XP_002310072.1 thioredoxin-like protein YLS8 isoform X1 [Populus trichocarpa] >XP_002283622.1 PREDICTED: thioredoxin-like protein YLS8 [Vitis vinifera] >XP_002529724.1 thioredoxin-like protein YLS8 [Ricinus communis] >XP_003554015.1 thioredoxin-like protein YLS8 [Glycine max] >XP_007043276.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Theobroma cacao] >XP_009407394.1 PREDICTED: thioredoxin-like protein YLS8 [Musa acuminata subsp. malaccensis] >XP_009413118.1 PREDICTED: thioredoxin-like protein YLS8 [Musa acuminata subsp. malaccensis] >XP_010067004.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Eucalyptus grandis] >XP_010274887.1 PREDICTED: thioredoxin-like protein YLS8 [Nelumbo nucifera] >XP_011002244.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Populus euphratica] >XP_011002246.1 PREDICTED: thioredoxin-like protein YLS8 isoform X1 [Populus euphratica] >XP_012066576.1 thioredoxin-like protein YLS8 [Jatropha curcas] >XP_020202007.1 thioredoxin-like protein YLS8 [Cajanus cajan] >XP_020524920.1 thioredoxin-like protein YLS8 [Amborella trichopoda] >XP_021294002.1 thioredoxin-like protein YLS8 [Herrania umbratica] >XP_022743304.1 thioredoxin-like protein YLS8 [Durio zibethinus] >XP_022726013.1 thioredoxin-like protein YLS8 [Durio zibethinus] >ABK94150.1 unknown [Populus trichocarpa] >EEF32653.1 mitosis protein dim1, putative [Ricinus communis] >ACU14946.1 unknown [Glycine max] >CBI26324.3 unnamed protein product, partial [Vitis vinifera] >EOX99107.1 MRNA splicing factor, thioredoxin-like U5 snRNP isoform 2 [Theobroma cacao] >ERN09427.1 hypothetical protein AMTR_s00029p00063040 [Amborella trichopoda] >KDP42594.1 hypothetical protein JCGZ_24368 [Jatropha curcas] >KHN29583.1 Thioredoxin-like protein 4A [Glycine soja] >KHN34702.1 Thioredoxin-like protein 4A [Glycine soja] >KRG94825.1 hypothetical protein GLYMA_19G111800 [Glycine max] >KRH40889.1 hypothetical protein GLYMA_09G283300 [Glycine max] >KYP40706.1 Thioredoxin-like protein 4A [Cajanus cajan] >GAV72260.1 DIM1 domain-containing protein [Cephalotus follicularis] >OWM90666.1 hypothetical protein CDL15_Pgr020971 [Punica granatum] >PKI34262.1 hypothetical protein CRG98_045361 [Punica granatum] >PNT27585.1 hypothetical protein POPTR_007G072700v3 [Populus trichocarpa] >PNT27586.1 hypothetical protein POPTR_007G072700v3 [Populus trichocarpa] >PNT27587.1 hypothetical protein POPTR_007G072700v3 [Populus trichocarpa] >PON34927.1 Thioredoxin-like protein [Parasponia andersonii] >POO03557.1 Thioredoxin-like protein [Trema orientalis] >RDX77683.1 Thioredoxin-like protein YLS8 [Mucuna pruriens])

HSP 1 Score: 295.8 bits (756), Expect = 7.7e-77
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDI+ETVY
Sbjct: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 120

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142

BLAST of MELO3C020882.2 vs. NCBI nr
Match: KCW65068.1 (hypothetical protein EUGRSUZ_G02580 [Eucalyptus grandis])

HSP 1 Score: 295.8 bits (756), Expect = 7.7e-77
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 176 MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 235

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDI+ETVY
Sbjct: 236 VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIVETVY 295

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 296 RGARKGRGLVIAPKDYSTKYRY 317

BLAST of MELO3C020882.2 vs. TAIR10
Match: AT5G08290.1 (mRNA splicing factor, thioredoxin-like U5 snRNP)

HSP 1 Score: 295.0 bits (754), Expect = 2.4e-80
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQ+ILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1   MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142

BLAST of MELO3C020882.2 vs. TAIR10
Match: AT3G24730.1 (mRNA splicing factor, thioredoxin-like U5 snRNP)

HSP 1 Score: 94.7 bits (234), Expect = 4.8e-20
Identity = 52/137 (37.96%), Postives = 78/137 (56.93%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLL  L +   +D+ I    + ++V+RFG   D  C+Q DE+LA     +  FA + L
Sbjct: 9   MSYLLKTLTTKEEIDRVIRDTIDEVLVLRFGRSSDAVCLQHDEILAKSVRDVSKFAKVAL 68

Query: 61  VDITEVPDFNTMYELYD----PSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDII 120
           VD+ +  D     + +D    PST+ FFF   H+ +D GT ++ K   A   KQ+FID++
Sbjct: 69  VDV-DSEDVQVYVKYFDITLFPSTI-FFFNAHHMKLDSGTADHTKWVGAFHIKQDFIDVV 128

Query: 121 ETVYRGARKGRGLVIAP 134
           E +YRGA KG+ +V  P
Sbjct: 129 EAIYRGAMKGKMIVQCP 143

BLAST of MELO3C020882.2 vs. Swiss-Prot
Match: sp|Q9FE62|YLS8_ARATH (Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=2 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 4.3e-79
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQ+ILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1   MSYLLPHLHSGWAVDQSILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142

BLAST of MELO3C020882.2 vs. Swiss-Prot
Match: sp|P83876|TXN4A_HUMAN (Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.3e-71
Identity = 122/142 (85.92%), Postives = 135/142 (95.07%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSY+LPHLH+GW VDQAIL+EE+R+VVIRFGHDWD TCM+MDEVL S+AE +KNFAVIYL
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNNKINWA++DKQE +DIIETVY
Sbjct: 61  VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLV++PKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142

BLAST of MELO3C020882.2 vs. Swiss-Prot
Match: sp|P83877|TXN4A_MOUSE (Thioredoxin-like protein 4A OS=Mus musculus OX=10090 GN=Txnl4a PE=1 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 3.3e-71
Identity = 122/142 (85.92%), Postives = 135/142 (95.07%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSY+LPHLH+GW VDQAIL+EE+R+VVIRFGHDWD TCM+MDEVL S+AE +KNFAVIYL
Sbjct: 1   MSYMLPHLHNGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNFAVIYL 60

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFN MYELYDP TVMFFFRNKHIMIDLGTGNNNKINWA++DKQE +DIIETVY
Sbjct: 61  VDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLV++PKDYSTKYRY
Sbjct: 121 RGARKGRGLVVSPKDYSTKYRY 142

BLAST of MELO3C020882.2 vs. Swiss-Prot
Match: sp|P87215|DIMI_SCHPO (Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dim1 PE=1 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 1.1e-61
Identity = 109/142 (76.76%), Postives = 126/142 (88.73%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSY LPHLHSGW VDQAIL+E+ERLVVIRFG D DE C++ DEVL  +AE + N AVIYL
Sbjct: 1   MSYFLPHLHSGWHVDQAILSEQERLVVIRFGRDHDEECIKQDEVLYRIAEKVVNMAVIYL 60

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDI EVPDFN MYELYD +T+MFF+RNKH+MIDLGTGNNNKINW L+DKQE IDIIET++
Sbjct: 61  VDIDEVPDFNKMYELYDRTTIMFFYRNKHMMIDLGTGNNNKINWPLEDKQEMIDIIETIF 120

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKG+GLVI+PKDYST++RY
Sbjct: 121 RGARKGKGLVISPKDYSTRHRY 142

BLAST of MELO3C020882.2 vs. Swiss-Prot
Match: sp|Q75BD8|DIB1_ASHGO (Spliceosomal protein DIB1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=DIB1 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 2.2e-51
Identity = 93/138 (67.39%), Postives = 112/138 (81.16%), Query Frame = 0

Query: 2   SYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYLV 61
           S  LPHLHSGW VDQAI+ EEERLVVIRFG D D +CM MDE+L S+AE + NFA IY+ 
Sbjct: 3   SVFLPHLHSGWHVDQAIVTEEERLVVIRFGSDSDRSCMLMDEILYSIAEKVVNFAAIYVC 62

Query: 62  DITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVYR 121
           D TEVPDFN MYEL DP TVMFF++NKH+  D GTGNNNK+N+ + +KQE IDIIETV+R
Sbjct: 63  DTTEVPDFNEMYELQDPMTVMFFYKNKHMRCDFGTGNNNKMNFVVDNKQEMIDIIETVFR 122

Query: 122 GARKGRGLVIAPKDYSTK 140
           GAR+ +GLV++P DY+ K
Sbjct: 123 GARRNKGLVVSPYDYNYK 140

BLAST of MELO3C020882.2 vs. TrEMBL
Match: tr|S4U0X2|S4U0X2_GOSHI (thioredoxin-like protein YLS8 OS=Gossypium hirsutum OX=3635 GN=LOC107944993 PE=2 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.9e-77
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142

BLAST of MELO3C020882.2 vs. TrEMBL
Match: tr|A0A2P2M121|A0A2P2M121_RHIMU (Mitosis protein YLS8 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.9e-77
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142

BLAST of MELO3C020882.2 vs. TrEMBL
Match: tr|A0A1J3EC65|A0A1J3EC65_NOCCA (Thioredoxin-like protein YLS8 OS=Noccaea caerulescens OX=107243 GN=LC_TR17093_c0_g1_i1_g.58856 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.9e-77
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 121 RGARKGRGLVIAPKDYSTKYRY 142

BLAST of MELO3C020882.2 vs. TrEMBL
Match: tr|A0A1J3DF14|A0A1J3DF14_NOCCA (Thioredoxin-like protein YLS8 (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR21189_c0_g1_i1_g.70234 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.9e-77
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 38  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 97

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 98  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 157

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 158 RGARKGRGLVIAPKDYSTKYRY 179

BLAST of MELO3C020882.2 vs. TrEMBL
Match: tr|A0A1J3IZG5|A0A1J3IZG5_NOCCA (Thioredoxin-like protein YLS8 (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP_TR24166_c0_g1_i1_g.70258 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.9e-77
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0

Query: 1   MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 60
           MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL
Sbjct: 31  MSYLLPHLHSGWAVDQAILAEEERLVVIRFGHDWDETCMQMDEVLASVAETIKNFAVIYL 90

Query: 61  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 120
           VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY
Sbjct: 91  VDITEVPDFNTMYELYDPSTVMFFFRNKHIMIDLGTGNNNKINWALKDKQEFIDIIETVY 150

Query: 121 RGARKGRGLVIAPKDYSTKYRY 143
           RGARKGRGLVIAPKDYSTKYRY
Sbjct: 151 RGARKGRGLVIAPKDYSTKYRY 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004148041.15.9e-77100.00PREDICTED: thioredoxin-like protein YLS8 [Cucumis sativus] >XP_004497782.1 PREDI... [more]
KJB77370.15.9e-77100.00hypothetical protein B456_012G134400 [Gossypium raimondii][more]
PPS03745.15.9e-77100.00hypothetical protein GOBAR_AA16917 [Gossypium barbadense][more]
NP_001341033.17.7e-7799.30DIM 1-like protein [Glycine max] >XP_002310072.1 thioredoxin-like protein YLS8 i... [more]
KCW65068.17.7e-7799.30hypothetical protein EUGRSUZ_G02580 [Eucalyptus grandis][more]
Match NameE-valueIdentityDescription
AT5G08290.12.4e-8099.30mRNA splicing factor, thioredoxin-like U5 snRNP[more]
AT3G24730.14.8e-2037.96mRNA splicing factor, thioredoxin-like U5 snRNP[more]
Match NameE-valueIdentityDescription
sp|Q9FE62|YLS8_ARATH4.3e-7999.30Thioredoxin-like protein YLS8 OS=Arabidopsis thaliana OX=3702 GN=YLS8 PE=2 SV=1[more]
sp|P83876|TXN4A_HUMAN3.3e-7185.92Thioredoxin-like protein 4A OS=Homo sapiens OX=9606 GN=TXNL4A PE=1 SV=1[more]
sp|P83877|TXN4A_MOUSE3.3e-7185.92Thioredoxin-like protein 4A OS=Mus musculus OX=10090 GN=Txnl4a PE=1 SV=1[more]
sp|P87215|DIMI_SCHPO1.1e-6176.76Mitosis protein dim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2... [more]
sp|Q75BD8|DIB1_ASHGO2.2e-5167.39Spliceosomal protein DIB1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / F... [more]
Match NameE-valueIdentityDescription
tr|S4U0X2|S4U0X2_GOSHI3.9e-77100.00thioredoxin-like protein YLS8 OS=Gossypium hirsutum OX=3635 GN=LOC107944993 PE=2... [more]
tr|A0A2P2M121|A0A2P2M121_RHIMU3.9e-77100.00Mitosis protein YLS8 OS=Rhizophora mucronata OX=61149 PE=4 SV=1[more]
tr|A0A1J3EC65|A0A1J3EC65_NOCCA3.9e-77100.00Thioredoxin-like protein YLS8 OS=Noccaea caerulescens OX=107243 GN=LC_TR17093_c0... [more]
tr|A0A1J3DF14|A0A1J3DF14_NOCCA3.9e-77100.00Thioredoxin-like protein YLS8 (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA... [more]
tr|A0A1J3IZG5|A0A1J3IZG5_NOCCA3.9e-77100.00Thioredoxin-like protein YLS8 (Fragment) OS=Noccaea caerulescens OX=107243 GN=MP... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Cellular Component
TermDefinition
GO:0046540U4/U6 x U5 tri-snRNP complex
Vocabulary: INTERPRO
TermDefinition
IPR036249Thioredoxin-like_sf
IPR004123Dim1
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0000245 spliceosomal complex assembly
biological_process GO:0007033 vacuole organization
biological_process GO:0007067 mitotic nuclear division
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0007030 Golgi organization
biological_process GO:0016197 endosomal transport
biological_process GO:0000902 cell morphogenesis
biological_process GO:0016049 cell growth
cellular_component GO:0005681 spliceosomal complex
cellular_component GO:0009536 plastid
cellular_component GO:0019013 viral nucleocapsid
cellular_component GO:0046540 U4/U6 x U5 tri-snRNP complex
cellular_component GO:0005682 U5 snRNP
cellular_component GO:0005737 cytoplasm
molecular_function GO:0003674 molecular_function
molecular_function GO:0003824 catalytic activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020882.2.1MELO3C020882.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004123Dim1 familySMARTSM01410DIM1_2coord: 4..136
e-value: 1.4E-97
score: 340.1
IPR004123Dim1 familyPIRSFPIRSF017199Dim1coord: 1..142
e-value: 5.4E-75
score: 247.6
IPR004123Dim1 familyPFAMPF02966DIM1coord: 4..136
e-value: 2.2E-67
score: 224.8
IPR004123Dim1 familyPANTHERPTHR12052THIOREDOXIN-LIKE PROTEN 4A, 4Bcoord: 1..141
IPR004123Dim1 familyCDDcd02954DIM1coord: 10..123
e-value: 1.05973E-75
score: 222.555
NoneNo IPR availableGENE3DG3DSA:3.40.30.10coord: 1..141
e-value: 9.9E-76
score: 254.0
NoneNo IPR availablePANTHERPTHR12052:SF5THIOREDOXIN-LIKE PROTEIN 4Acoord: 1..141
IPR036249Thioredoxin-like superfamilySUPERFAMILYSSF52833Thioredoxin-likecoord: 4..137

The following gene(s) are paralogous to this gene:

None