MELO3C020868 (gene) Melon (DHL92) v3.5.1

NameMELO3C020868
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProtein FRIGIDA-like protein
Locationchr11 : 3371858 .. 3372196 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAGGATTGTGGAGAGGATTGCTTCTGAAACAAAGATTGCTGAGTGGAAGCAGAGTATTCTCAGCAAAACGCACGAGCAATTACATTCGGAAGCTTCTTCCTTTCTTATTTTCAGTCTCCAATGGAAAGATTTGGAGAGGCACTTTGAATCAACACGTGAAATGATTTTGACTCTGTATGAGGAGGTTGAGCGACGGGAGACAGCTATTTCCTCCAAGGAAGAGGCTATTGCTTTGAAGGAAGAAGAGTTTGAATTGAAGAAGAAAGAACTGAATGAGTTCAATCTTTTGATCGAGAAGTCTGATGCTGCTCTTAAAAAAAGGAAGTGGAGTTGA

mRNA sequence

ATGGAGAGGATTGTGGAGAGGATTGCTTCTGAAACAAAGATTGCTGAGTGGAAGCAGAGTATTCTCAGCAAAACGCACGAGCAATTACATTCGGAAGCTTCTTCCTTTCTTATTTTCAGTCTCCAATGGAAAGATTTGGAGAGGCACTTTGAATCAACACGTGAAATGATTTTGACTCTGTATGAGGAGGTTGAGCGACGGGAGACAGCTATTTCCTCCAAGGAAGAGGCTATTGCTTTGAAGGAAGAAGAGTTTGAATTGAAGAAGAAAGAACTGAATGAGTTCAATCTTTTGATCGAGAAGTCTGATGCTGCTCTTAAAAAAAGGAAGTGGAGTTGA

Coding sequence (CDS)

ATGGAGAGGATTGTGGAGAGGATTGCTTCTGAAACAAAGATTGCTGAGTGGAAGCAGAGTATTCTCAGCAAAACGCACGAGCAATTACATTCGGAAGCTTCTTCCTTTCTTATTTTCAGTCTCCAATGGAAAGATTTGGAGAGGCACTTTGAATCAACACGTGAAATGATTTTGACTCTGTATGAGGAGGTTGAGCGACGGGAGACAGCTATTTCCTCCAAGGAAGAGGCTATTGCTTTGAAGGAAGAAGAGTTTGAATTGAAGAAGAAAGAACTGAATGAGTTCAATCTTTTGATCGAGAAGTCTGATGCTGCTCTTAAAAAAAGGAAGTGGAGTTGA

Protein sequence

MERIVERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEVERRETAISSKEEAIALKEEEFELKKKELNEFNLLIEKSDAALKKRKWS*
BLAST of MELO3C020868 vs. Swiss-Prot
Match: FRL5_ARATH (FRIGIDA-like protein 5 OS=Arabidopsis thaliana GN=FRL5 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.5e-07
Identity = 33/120 (27.50%), Postives = 62/120 (51.67%), Query Frame = 1

Query: 5   VERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEV 64
           +E++ S  ++ +  +    KT E L   A S L+ ++QWK++E +F+STR ++    +E+
Sbjct: 1   MEKVTSGLELVDISKRNFRKTLESLQEGAHSLLLLTIQWKEIESYFDSTRSVLEERAKEL 60

Query: 65  ERRETAISSK--------------EEAIALKEEEFELKKKELNEFNLLIEKSDAALKKRK 111
           E  E +I  K              +E++  K+ EFE K+K+ +    L +K++   +KR+
Sbjct: 61  EALEESIKVKALELEKKEKELCLIDESMKAKQSEFEKKEKDFD----LEQKAEVEKRKRE 116

BLAST of MELO3C020868 vs. TrEMBL
Match: A0A0A0LMH5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277090 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 5.5e-28
Identity = 70/113 (61.95%), Postives = 85/113 (75.22%), Query Frame = 1

Query: 5   VERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEV 64
           ++R+AS  K++EWKQS L K HEQLHSEASSFL+FSLQWKDLE HFESTREMILT  EEV
Sbjct: 1   MDRVASNMKLSEWKQSNLCKAHEQLHSEASSFLLFSLQWKDLETHFESTREMILTQCEEV 60

Query: 65  ERRETAISSKEEAIALKE-------EEFELKKKELNEFNLLIEKSDAALKKRK 111
           ERRE AI+ KEE +   E       +E EL+K EL+E N LI K D+A+K ++
Sbjct: 61  ERREKAIALKEEKLVDLEKCILECSKEVELRKNELSELNRLIVKCDSAVKGKE 113

BLAST of MELO3C020868 vs. TrEMBL
Match: W9RCF3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010214 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-14
Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 1

Query: 6   ERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEVE 65
           E I S+ KI+E KQ +L K HE+ HS+ASS L+FSLQW+DLE HFES R+ + T  + + 
Sbjct: 4   EEITSDLKISELKQGVLCKAHEEFHSQASSMLVFSLQWRDLENHFESIRKSLRTQLQGLI 63

Query: 66  RRETAISSKEEAIALKEEE----FELKKKELNEFNLLIEKSDAALK 108
            RE  ++S+E  +  +E E     + K KEL     LI +   AL+
Sbjct: 64  EREEHVASRERQLEAREAELSSNLDSKAKELEGIEKLIGEQAKALE 109

BLAST of MELO3C020868 vs. TrEMBL
Match: W9RET5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010215 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-14
Identity = 46/106 (43.40%), Postives = 65/106 (61.32%), Query Frame = 1

Query: 6   ERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEVE 65
           E I S+ KI+E KQ +L K HE+ HS+ASS L+FSLQW+DLE HFES R+ + T  + + 
Sbjct: 4   EEITSDLKISELKQGVLCKAHEEFHSQASSMLVFSLQWRDLENHFESIRKSLRTQLQGLI 63

Query: 66  RRETAISSKEEAIALKEEE----FELKKKELNEFNLLIEKSDAALK 108
            RE  ++S+E  +  +E E     + K KEL     LI +   AL+
Sbjct: 64  EREEHVASRERQLEAREAELSSNLDSKAKELEGIEKLIGEQAKALE 109

BLAST of MELO3C020868 vs. TrEMBL
Match: W9RSR7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010219 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-12
Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 1

Query: 5   VERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEV 64
           +E I ++ KI+E KQ +L K +E+LHS+ASS L+FSLQWKDLE HFESTR+ +    E +
Sbjct: 1   MEEIINDLKISELKQGVLCKAYEELHSQASSMLVFSLQWKDLENHFESTRKSLRVELEIL 60

Query: 65  ERRETAISSKEEAIALKEEEFELKKKELNEFNLLIEKSDAALK 108
             RE  +  +E  +       + K KEL     LI +    L+
Sbjct: 61  AERERQLEVREAEL---NSNLDSKAKELEGVEKLIGEQAKVLE 100

BLAST of MELO3C020868 vs. TrEMBL
Match: W9RSR7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_010219 PE=4 SV=1)

HSP 1 Score: 32.3 bits (72), Expect = 4.6e+02
Identity = 28/104 (26.92%), Postives = 47/104 (45.19%), Query Frame = 1

Query: 11  ETKIAEWKQSILSKTHE-----QLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEVE 70
           E + AE   ++ SK  E     +L  E +  L  +LQ      H +S + +I    EE+E
Sbjct: 68  EVREAELNSNLDSKAKELEGVEKLIGEQAKVLELNLQ------HVDSLKSLIQENREELE 127

Query: 71  RRETAISSKEEAIALKEEEFELKKKELNEFNLLIEKSDAALKKR 110
            +E      + +IA KE EF   +  L E    +E  +  +K++
Sbjct: 128 VKEKQYVVIQNSIAEKEREFASTRSSLKEGEEKLESLEKRIKQK 165


HSP 2 Score: 73.6 bits (179), Expect = 1.8e-10
Identity = 35/81 (43.21%), Postives = 53/81 (65.43%), Query Frame = 1

Query: 6  ERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEVE 65
          E++++E K +E KQ I+ KT  +L  +ASS L+  LQWK+LE HF+S R +I    EEVE
Sbjct: 3  EKVSNELKNSELKQEIVRKTMNELQEKASSVLLLCLQWKELEDHFDSIRGLIQAEKEEVE 62

Query: 66 RRETAISSKEEAIALKEEEFE 87
          R+E  +  +E  + +KE+  E
Sbjct: 63 RKERVVREREREVGVKEKRVE 83

BLAST of MELO3C020868 vs. TAIR10
Match: AT5G27230.1 (AT5G27230.1 Frigida-like protein)

HSP 1 Score: 55.5 bits (132), Expect = 2.5e-08
Identity = 33/120 (27.50%), Postives = 62/120 (51.67%), Query Frame = 1

Query: 5   VERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEV 64
           +E++ S  ++ +  +    KT E L   A S L+ ++QWK++E +F+STR ++    +E+
Sbjct: 1   MEKVTSGLELVDISKRNFRKTLESLQEGAHSLLLLTIQWKEIESYFDSTRSVLEERAKEL 60

Query: 65  ERRETAISSK--------------EEAIALKEEEFELKKKELNEFNLLIEKSDAALKKRK 111
           E  E +I  K              +E++  K+ EFE K+K+ +    L +K++   +KR+
Sbjct: 61  EALEESIKVKALELEKKEKELCLIDESMKAKQSEFEKKEKDFD----LEQKAEVEKRKRE 116

BLAST of MELO3C020868 vs. TAIR10
Match: AT3G12190.1 (AT3G12190.1 BEST Arabidopsis thaliana protein match is: Frigida-like protein (TAIR:AT5G27220.1))

HSP 1 Score: 55.1 bits (131), Expect = 3.3e-08
Identity = 24/81 (29.63%), Postives = 45/81 (55.56%), Query Frame = 1

Query: 13 KIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEVERRETAIS 72
          ++A+WK+  L ++  +  S+AS  L F+L W+DLE HF+S    ++   +E+E +E  + 
Sbjct: 7  RVAKWKKERLRRSLMKAESKASDVLSFTLSWRDLESHFDSIESDLVKRSQEIESKEKHLE 66

Query: 73 SKEEAIALKEEEFELKKKELN 94
           +   +  K +  E + +E+N
Sbjct: 67 KRSHELESKGKILEKRAREIN 87

BLAST of MELO3C020868 vs. TAIR10
Match: AT5G27220.1 (AT5G27220.1 Frigida-like protein)

HSP 1 Score: 49.3 bits (116), Expect = 1.8e-06
Identity = 25/97 (25.77%), Postives = 50/97 (51.55%), Query Frame = 1

Query: 1  MERIVERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTL 60
          ME I  ++ +E ++ + K + + KT + + S+AS  LI +LQW D E H +S  E +   
Sbjct: 1  MEEI--KLENEIRLCDVKANNIRKTMDMIKSQASDVLILNLQWCDFEEHLKSASEKLELR 60

Query: 61 YEEVERRETAISSKEEAIALKEEEFELKKKELNEFNL 98
          + E+  +E  + ++  A+  + +  E  + E+ +  +
Sbjct: 61 FRELVLKEVELQNRSFALEERAKVVEAAEAEMGDLEM 95


HSP 2 Score: 35.8 bits (81), Expect = 2.1e-02
Identity = 26/108 (24.07%), Postives = 47/108 (43.52%), Query Frame = 1

Query: 2   ERIVERIASETKIAEWKQSILS--KTHEQLHSEASSFLIFSLQWKDLERHFESTREMILT 61
           E   E ++ E ++   K +     +  E    E  SF     + +D  + F+S    ++ 
Sbjct: 501 ETTAELVSKENELCSVKDTYRECLQNWEIKEKELKSFQEEVKKIQDSLKDFQSKEAELVK 560

Query: 62  LYEEVERRETAISSKEEAIALKEEEFELKKKELNEFNLLIEKSDAALK 108
           L E +   E  +  K++ I ++ E+ ELK K+L+     ++K D  LK
Sbjct: 561 LKESLTEHEKELGLKKKQIHVRSEKIELKDKKLDAREERLDKKDEQLK 608

BLAST of MELO3C020868 vs. NCBI nr
Match: gi|778669872|ref|XP_011649315.1| (PREDICTED: FRIGIDA-like protein 5 isoform X2 [Cucumis sativus])

HSP 1 Score: 131.7 bits (330), Expect = 7.9e-28
Identity = 70/113 (61.95%), Postives = 85/113 (75.22%), Query Frame = 1

Query: 5   VERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEV 64
           ++R+AS  K++EWKQS L K HEQLHSEASSFL+FSLQWKDLE HFESTREMILT  EEV
Sbjct: 1   MDRVASNMKLSEWKQSNLCKAHEQLHSEASSFLLFSLQWKDLETHFESTREMILTQCEEV 60

Query: 65  ERRETAISSKEEAIALKE-------EEFELKKKELNEFNLLIEKSDAALKKRK 111
           ERRE AI+ KEE +   E       +E EL+K EL+E N LI K D+A+K ++
Sbjct: 61  ERREKAIALKEEKLVDLEKCILECSKEVELRKNELSELNRLIVKCDSAVKGKE 113

BLAST of MELO3C020868 vs. NCBI nr
Match: gi|449466953|ref|XP_004151190.1| (PREDICTED: FRIGIDA-like protein 5 isoform X1 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 6.7e-27
Identity = 69/110 (62.73%), Postives = 82/110 (74.55%), Query Frame = 1

Query: 8   IASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEVERR 67
           +AS  K++EWKQS L K HEQLHSEASSFL+FSLQWKDLE HFESTREMILT  EEVERR
Sbjct: 7   VASNMKLSEWKQSNLCKAHEQLHSEASSFLLFSLQWKDLETHFESTREMILTQCEEVERR 66

Query: 68  ETAISSKEEAIALKE-------EEFELKKKELNEFNLLIEKSDAALKKRK 111
           E AI+ KEE +   E       +E EL+K EL+E N LI K D+A+K ++
Sbjct: 67  EKAIALKEEKLVDLEKCILECSKEVELRKNELSELNRLIVKCDSAVKGKE 116

BLAST of MELO3C020868 vs. NCBI nr
Match: gi|659115862|ref|XP_008457776.1| (PREDICTED: uncharacterized protein LOC103497387 isoform X1 [Cucumis melo])

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-26
Identity = 69/106 (65.09%), Postives = 77/106 (72.64%), Query Frame = 1

Query: 5   VERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEV 64
           +E IAS  KIAEWKQS L K HEQLHSEASSFL+FSL+WKDLE HFESTREMILTLYEEV
Sbjct: 1   METIASHMKIAEWKQSNLCKAHEQLHSEASSFLLFSLRWKDLETHFESTREMILTLYEEV 60

Query: 65  ERRETAISSKEEAIALKE-------EEFELKKKELNEFNLLIEKSD 104
           ERRE  I  KEE +   E       +E ELKK ELN+F    E+ +
Sbjct: 61  ERREKVILLKEEKLVDLEKCILETSKEVELKKNELNDFEKEFEEKE 106

BLAST of MELO3C020868 vs. NCBI nr
Match: gi|659115864|ref|XP_008457777.1| (PREDICTED: uncharacterized protein LOC103497387 isoform X2 [Cucumis melo])

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-26
Identity = 69/106 (65.09%), Postives = 77/106 (72.64%), Query Frame = 1

Query: 5   VERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEV 64
           +E IAS  KIAEWKQS L K HEQLHSEASSFL+FSL+WKDLE HFESTREMILTLYEEV
Sbjct: 1   METIASHMKIAEWKQSNLCKAHEQLHSEASSFLLFSLRWKDLETHFESTREMILTLYEEV 60

Query: 65  ERRETAISSKEEAIALKE-------EEFELKKKELNEFNLLIEKSD 104
           ERRE  I  KEE +   E       +E ELKK ELN+F    E+ +
Sbjct: 61  ERREKVILLKEEKLVDLEKCILETSKEVELKKNELNDFEKEFEEKE 106

BLAST of MELO3C020868 vs. NCBI nr
Match: gi|659115866|ref|XP_008457778.1| (PREDICTED: FRIGIDA-like protein 5 isoform X3 [Cucumis melo])

HSP 1 Score: 125.6 bits (314), Expect = 5.7e-26
Identity = 64/102 (62.75%), Postives = 77/102 (75.49%), Query Frame = 1

Query: 5   VERIASETKIAEWKQSILSKTHEQLHSEASSFLIFSLQWKDLERHFESTREMILTLYEEV 64
           +E IAS  KIAEWKQS L K HEQLHSEASSFL+FSL+WKDLE HFESTREMILTLYEEV
Sbjct: 1   METIASHMKIAEWKQSNLCKAHEQLHSEASSFLLFSLRWKDLETHFESTREMILTLYEEV 60

Query: 65  ERRETAISSKEEAIALKEEEFELKKKELNEFNLLIEKSDAAL 107
           ERRE  I  KEE +   E+ FE+ +K +++   ++E  +  L
Sbjct: 61  ERREKVILLKEEKLVDLEKYFEMVRKRIDDCEQVMELKEQKL 102

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
FRL5_ARATH4.5e-0727.50FRIGIDA-like protein 5 OS=Arabidopsis thaliana GN=FRL5 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LMH5_CUCSA5.5e-2861.95Uncharacterized protein OS=Cucumis sativus GN=Csa_2G277090 PE=4 SV=1[more]
W9RCF3_9ROSA1.6e-1443.40Uncharacterized protein OS=Morus notabilis GN=L484_010214 PE=4 SV=1[more]
W9RET5_9ROSA1.6e-1443.40Uncharacterized protein OS=Morus notabilis GN=L484_010215 PE=4 SV=1[more]
W9RSR7_9ROSA2.5e-1241.75Uncharacterized protein OS=Morus notabilis GN=L484_010219 PE=4 SV=1[more]
W9RSR7_9ROSA4.6e+0226.92Uncharacterized protein OS=Morus notabilis GN=L484_010219 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G27230.12.5e-0827.50 Frigida-like protein[more]
AT3G12190.13.3e-0829.63 BEST Arabidopsis thaliana protein match is: Frigida-like protein (TA... [more]
AT5G27220.11.8e-0625.77 Frigida-like protein[more]
Match NameE-valueIdentityDescription
gi|778669872|ref|XP_011649315.1|7.9e-2861.95PREDICTED: FRIGIDA-like protein 5 isoform X2 [Cucumis sativus][more]
gi|449466953|ref|XP_004151190.1|6.7e-2762.73PREDICTED: FRIGIDA-like protein 5 isoform X1 [Cucumis sativus][more]
gi|659115862|ref|XP_008457776.1|1.5e-2665.09PREDICTED: uncharacterized protein LOC103497387 isoform X1 [Cucumis melo][more]
gi|659115864|ref|XP_008457777.1|1.5e-2665.09PREDICTED: uncharacterized protein LOC103497387 isoform X2 [Cucumis melo][more]
gi|659115866|ref|XP_008457778.1|5.7e-2662.75PREDICTED: FRIGIDA-like protein 5 isoform X3 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020868T1MELO3C020868T1mRNA


The following gene(s) are paralogous to this gene:

None