MELO3C020856.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020856.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	F-box family protein
Location	chr11 : 3534365 .. 3537267 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTGGAGAGCATGAATTTGGTGTTAAGAATGAGACCGAAAACACTATATAAGAATGAATTTTGAATTGCATTATAATCTGTTGAGAAAACTAAACAAACTCTAAGAGTGGTTTTTTGGTTTGCGAACAGCTATTCATTACTCAAACTTAAACTTAAACTAACTGCAAGGAACTAAATTCAAAATTTATTGGGACTAAATTCGTCGGATGAATTCAAATACAGCGAAGTTTTTGCGAGAGAATAAGACAAGATGAGTAATTCCATTATGGAGGTTTCCTAAATTCATGAAAATACCCAACAAAATGTACGTTCGTATCATATAATTTGGATATGTTTGGAGCTCAGATTCTTGAAATGGTGGCGAAATCATGTCAACATCTTCTCTCTTTCTCTCTCTTCTTTGAATCTTCCGTTTCCTTTTTTATGCTTATCTTTTGCCAAAAGTAACGAATTCAACTCGTGAATTTCCTCGTTTTTCAACGCCGCAAACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTNNNNNNNNNNCTTCTTCTTCTTCTTCTTCTTCTTCTTCCAAATTGATATACGGCTACAATGGATTCGGATGTTGTGTGGTCGGTAGAGATGGAGTTGGAACCGGAGATTGATCGATTGCCGATTGACCTATTGGCTCATATTTTTGCTATGATCACCTCCTTCACCGATTTGGCTCAGTAATTCATTTTCAATTTCGGCTTTGTTGAATTTTTTTTCTTCAATTGCTATTTTTATTTCCCCCTAAATTTGAGGGTTTATGCGATTGTGGAAAAACGCAGGGCGTGCGGCGTATGTAGAAAATGGAAGGAAGGAGTTAAATTGTCTCTCGGTAGGAGGAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATAATTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGGGAGCTCGACATGTAATCTCTGTCTCTCTTGAAATTTCAGTGAAATTTTCATCAGTTTGCTTTTCTTCGAGTAGTTTCTGATTGCAGATAGTTACTGGTGTTGTGTGTTGTGAGATGAAACTAGTTTTTTGAATTCGCTAATCGATTCAATTGGCTTCGCTTTCCGATTACGAACCACAAAAACAGAGGTTTATCTTGAGATTGTGAGGTTGTTTGGGAATAATCTAGGGAGAAGGTTCTTTGAAATTGTGTTTGTAAATCTGGTGTTAAATTATTGATGTTTATGGTTCGTGTTCTTCAGCTCAAGGAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTATATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGGATCACCGACAAGGGTGTTGTGCAACTGGTATGAATTTAATATTATCTTATCTTAGAACAAACATTTCTAAAGAAATAGACCTTGATTTGTTATTGGAGAATGAGTTTAGATGGGATTTGAACTATTGGATTTCTCTAAATTGTTCATCATCTAGAATATATGTCGTTCGTAGTTTTGGATATTCTAGAGTCCATCCATAAGTAAACACCGGTTAGAGAAATTCTCTTTGTCCTGAAATTTTATGTTCTTTACAGGAAGGAAGTTTTTGGCAACATTTTCTTGTTCTCTCTACTTCAGAAATTTTGGAAATGCATGATTTTTGGAAGTAAGGTTCCACTTGTTCTTAGAAATAAATCTTCATAAGAGAAAAAACAAGAAACTACTTTCAAAAAATGGTACTTCATAGGCGGAAATTAACTTGCCCAAATTATGTGTTCTCAATCAAAATGTTAGAGACCCAAATTCCTAAAGTCATCATGAGGTTGTCTTAAAAGGTATAATCCATATTGCCACATACCTAGAATTTAATATTTTACAAGTTTTCTTGACAATCGAATGTTATAGGTTCAAACAAACTCTCTCGAATGATTAGTTGAAGTTTGCATTTGTGGTTATAAAACAATAAGAAAAAAAAAAATTCCAAATCCCTCCACCCACATATAAAAAATTTGTATTCCACATGTGCTTTCACTTTACTTTTGTTCCAAAATACATACTTTTTTCCACATTTCAATATCTTACGTAGTTTACTAACATATGACTTCCTTCTCCTAAAACTATATTTGCTTGTCTTCCCAGATTTCCAGAGCCAACTCTTTACAAAACTTGAATATTGGTGGAACCTTTGTCACAGACGTATCTCTATATGCAATTGCAGATAGCTGCCCAAATTTGAAGGTTATTATTCTAAGCATCTCCTTCACTCCCTATACAATAATACCTACATGTGTTGCACACAATCTTTAACCAAGTCCATATCTTTATTAATCCTGCAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACCGGACTTCTTATTCTTGTAAGTAAATGCCGAAAACTCGAGTCGATAAATGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCGATAAGTCCATCCCTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTGGCCTGTTGTGTGAAAATATGCTATTAAAATATTCTTCATATGTCCTGTAAAGCTTCTATTGTATGTATATGTCTTCATCTTTGTGTTTTTCTTCATCAAAAGTAAAATATTAGATTTGTTATCATTCCCCCAATAAAGCTGATTGTGTTACGTTCAGATCATTTAAAACTAAATTATACTCTCTTCTAGTGTAAATATAATTGTATGTAAAAACTAAGCTCGCATATTTTCGAGCTAAATGTGTTTATATTCAGATTGTCCCATAATTACATATCTTTGGGACCTAAGAATCAAGATTCTTCTAATAGTTTCCATTTGTTATCCAAATTAGATATATAGTAAAATTTAAGTAAGGG

mRNA sequence

AATTGGAGAGCATGAATTTGGTGTTAAGAATGAGACCGAAAACACTATATAAGAATGAATTTTGAATTGCATTATAATCTGTTGAGAAAACTAAACAAACTCTAAGAGTGGTTTTTTGGTTTGCGAACAGCTATTCATTACTCAAACTTAAACTTAAACTAACTGCAAGGAACTAAATTCAAAATTTATTGGGACTAAATTCGTCGGATGAATTCAAATACAGCGAAGTTTTTGCGAGAGAATAAGACAAGATGAGTAATTCCATTATGGAGGTTTCCTAAATTCATGAAAATACCCAACAAAATGTACGTTCGTATCATATAATTTGGATATGTTTGGAGCTCAGATTCTTGAAATGGTGGCGAAATCATGTCAACATCTTCTCTCTTTCTCTCTCTTCTTTGAATCTTCCGTTTCCTTTTTTATGCTTATCTTTTGCCAAAAGTAACGAATTCAACTCGTGAATTTCCTCGTTTTTCAACGCCGCAAACTTCTTCTTCTTCTTCTTCTTCTTCCAAATTGATATACGGCTACAATGGATTCGGATGTTGTGTGGTCGGTAGAGATGGAGTTGGAACCGGAGATTGATCGATTGCCGATTGACCTATTGGCTCATATTTTTGCTATGATCACCTCCTTCACCGATTTGGCTCAGGTTTATGCGATTGTGGAAAAACGCAGGGCGTGCGGCGTATGTAGAAAATGGAAGGAAGGAGTTAAATTGTCTCTCGGTAGGAGGAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATAATTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGGGAGCTCGACATCTCAAGGAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTATATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGGATCACCGACAAGGGTGTTGTGCAACTGATTTCCAGAGCCAACTCTTTACAAAACTTGAATATTGGTGGAACCTTTGTCACAGACGTATCTCTATATGCAATTGCAGATAGCTGCCCAAATTTGAAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACCGGACTTCTTATTCTTGTAAGTAAATGCCGAAAACTCGAGTCGATAAATGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCGATAAGTCCATCCCTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTGGCCTGTTGTGTGAAAATATGCTATTAAAATATTCTTCATATGTCCTGTAAAGCTTCTATTGTATGTATATGTCTTCATCTTTGTGTTTTTCTTCATCAAAAGTAAAATATTAGATTTGTTATCATTCCCCCAATAAAGCTGATTGTGTTACGTTCAGATCATTTAAAACTAAATTATACTCTCTTCTAGTGTAAATATAATTGTATGTAAAAACTAAGCTCGCATATTTTCGAGCTAAATGTGTTTATATTCAGATTGTCCCATAATTACATATCTTTGGGACCTAAGAATCAAGATTCTTCTAATAGTTTCCATTTGTTATCCAAATTAGATATATAGTAAAATTTAAGTAAGGG

Coding sequence (CDS)

ATGGATTCGGATGTTGTGTGGTCGGTAGAGATGGAGTTGGAACCGGAGATTGATCGATTGCCGATTGACCTATTGGCTCATATTTTTGCTATGATCACCTCCTTCACCGATTTGGCTCAGGTTTATGCGATTGTGGAAAAACGCAGGGCGTGCGGCGTATGTAGAAAATGGAAGGAAGGAGTTAAATTGTCTCTCGGTAGGAGGAAGAGTTTGAGCTTTGCTGGTTGGAAGATGGATGATAATTCCACTGCTCGCCTTATTCGCCATGCCTACAGTCTTCGGGAGCTCGACATCTCAAGGAGCCGTTGGGGTTGCCAAATAACAGACCATGGATTATATGAAATCTCTCTTGCAAAGTGCATTCCCAACCTCAAGTCCATTTCGCTTTGGGGTATGGCAGGGATCACCGACAAGGGTGTTGTGCAACTGATTTCCAGAGCCAACTCTTTACAAAACTTGAATATTGGTGGAACCTTTGTCACAGACGTATCTCTATATGCAATTGCAGATAGCTGCCCAAATTTGAAGACCATTGTCCTTTGGAGCTGTCGCCATGTAACAGAGACCGGACTTCTTATTCTTGTAAGTAAATGCCGAAAACTCGAGTCGATAAATGTTTGGGGAATGAGGGTTCCTGTAGACTGCTTCATTGGTTTGGTTGCGATAAGTCCATCCCTTCAAATAAAATCAAGAAGTCTGCTTAATTCTATGTGGCCTGTTGTGTGA

Protein sequence

MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEGVKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVTETGLLILVSKCRKLESINVWGMRVPVDCFIGLVAISPSLQIKSRSLLNSMWPVV

Homology

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BLAST of MELO3C020856.2 vs. NCBI nr
Match: XP_008457759.1 (PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_008457760.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902142.1 PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_016902143.1 PREDICTED: F-box protein At5g67140 [Cucumis melo])

HSP 1 Score: 408.7 bits (1049), Expect = 1.4e-110
Identity = 232/241 (96.27%), Postives = 232/241 (96.27%), Query Frame = 0


Query: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEG 60
           MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 60

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120
           VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC
Sbjct: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120

Query: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180
           IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL
Sbjct: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180

Query: 181 WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMWPV 240
           WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMWPV
Sbjct: 181 WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMWPV 232

Query: 241 V 242
           V
Sbjct: 241 V 232

[Close]

BLAST of MELO3C020856.2 vs. NCBI nr
Match: XP_004149695.1 (PREDICTED: F-box protein At5g67140-like [Cucumis sativus] >KGN61981.1 hypothetical protein Csa_2G279180 [Cucumis sativus])

HSP 1 Score: 400.6 bits (1028), Expect = 3.8e-108
Identity = 229/241 (95.02%), Postives = 229/241 (95.02%), Query Frame = 0


Query: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEG 60
           MDS VVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 4   MDSAVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 63

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120
           VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGC ITDHGLYEISLAKC
Sbjct: 64  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKC 123

Query: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180
           IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL
Sbjct: 124 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 183

Query: 181 WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMWPV 240
           WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMW V
Sbjct: 184 WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMWSV 235

Query: 241 V 242
           V
Sbjct: 244 V 235

[Close]

BLAST of MELO3C020856.2 vs. NCBI nr
Match: XP_022947259.1 (F-box protein At5g67140 [Cucurbita moschata])

HSP 1 Score: 370.2 bits (949), Expect = 5.5e-99
Identity = 214/242 (88.43%), Postives = 222/242 (91.74%), Query Frame = 0


Query: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEG 60
           M S  +W +EMELEPEIDRLPIDLLAHIFAMI SFTDLAQ         ACGVCRKWKEG
Sbjct: 1   MSSGDMWPIEMELEPEIDRLPIDLLAHIFAMIPSFTDLAQ---------ACGVCRKWKEG 60

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120
           VKLSLGRR+SLSFAGWKMDD STARLI HAYSLR+LDISRSRWGCQITDHGL+EISLAKC
Sbjct: 61  VKLSLGRRESLSFAGWKMDDYSTARLIHHAYSLRQLDISRSRWGCQITDHGLHEISLAKC 120

Query: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180
           IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSL+AIAD+CPNLKTI L
Sbjct: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIGL 180

Query: 181 WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRS-LLNSMWP 240
           WSCRH XXXXXXXXXXXXXXXXXXXXXXX VPVDCFIGLVAISPSLQIKSRS LLNSMWP
Sbjct: 181 WSCRHXXXXXXXXXXXXXXXXXXXXXXXXXVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 233

Query: 241 VV 242
           V+
Sbjct: 241 VL 233

[Close]

BLAST of MELO3C020856.2 vs. NCBI nr
Match: XP_023533904.1 (F-box protein At5g67140 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367.5 bits (942), Expect = 3.6e-98
Identity = 213/242 (88.02%), Postives = 221/242 (91.32%), Query Frame = 0


Query: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEG 60
           M S  +W +EMELE EIDRLPIDLLAHIFAMI SFTDLAQ         ACGVCRKWKEG
Sbjct: 1   MSSSDMWPIEMELEAEIDRLPIDLLAHIFAMIPSFTDLAQ---------ACGVCRKWKEG 60

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120
           VKLSLGRR+SLSFAGWKMDD STARLI HAYSLR+LDISRSRWGCQITDHGL+EISLAKC
Sbjct: 61  VKLSLGRRESLSFAGWKMDDYSTARLIHHAYSLRQLDISRSRWGCQITDHGLHEISLAKC 120

Query: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180
           IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSL+AIAD+CPNLKTI L
Sbjct: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIGL 180

Query: 181 WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRS-LLNSMWP 240
           WSCRH XXXXXXXXXXXXXXXXXXXXXXX VPVDCFIGLVAISPSLQIKSRS LLNSMWP
Sbjct: 181 WSCRHXXXXXXXXXXXXXXXXXXXXXXXXXVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 233

Query: 241 VV 242
           V+
Sbjct: 241 VL 233

[Close]

BLAST of MELO3C020856.2 vs. NCBI nr
Match: XP_023006941.1 (F-box protein At5g67140 [Cucurbita maxima])

HSP 1 Score: 367.1 bits (941), Expect = 4.6e-98
Identity = 213/242 (88.02%), Postives = 221/242 (91.32%), Query Frame = 0


Query: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEG 60
           M S  +W +EMELE EIDRLPIDLLAHIFAMI SFTDLAQ         ACGVCRKWKEG
Sbjct: 1   MSSGDMWPIEMELEAEIDRLPIDLLAHIFAMIPSFTDLAQ---------ACGVCRKWKEG 60

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120
           VKLSLGRR+SLSFAGWKMDD STARLI HAYSLR+LDISRSRWGCQITDHGL+EISLAKC
Sbjct: 61  VKLSLGRRESLSFAGWKMDDYSTARLIHHAYSLRQLDISRSRWGCQITDHGLHEISLAKC 120

Query: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180
           IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSL+AIAD+CPNLKTI L
Sbjct: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLFAIADNCPNLKTIGL 180

Query: 181 WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRS-LLNSMWP 240
           WSCRH XXXXXXXXXXXXXXXXXXXXXXX VPVDCFIGLVAISPSLQIKSRS LLNSMWP
Sbjct: 181 WSCRHXXXXXXXXXXXXXXXXXXXXXXXXXVPVDCFIGLVAISPSLQIKSRSLLLNSMWP 233

Query: 241 VV 242
           V+
Sbjct: 241 VL 233

[Close]

BLAST of MELO3C020856.2 vs. TAIR10
Match: AT5G67140.1 (F-box/RNI-like superfamily protein)

HSP 1 Score: 256.5 bits (654), Expect = 1.6e-68
Identity = 151/224 (67.41%), Postives = 182/224 (81.25%), Query Frame = 0


Query: 11  MELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEGVKLSLGRRKS 70
           M+ E  IDRLP+DLLA+IF++ TSFT LAQ         A GVC+KW++ V  S+ RR++
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQ---------ASGVCKKWRKAVNQSMARRET 60

Query: 71  LSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISLW 130
           LSFAGWKMDD+ST+RL+  A++L+ELDISRSRWGC ITD+GLY+I+ A+C+ NL S+SLW
Sbjct: 61  LSFAGWKMDDDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLW 120

Query: 131 GMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVXXXX 190
           GM  ITD GVVQLISR +SLQ+LNIGGTF+TD SL+AIA+ C  LKTI +W CRH XXXX
Sbjct: 121 GMTAITDSGVVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHXXXXX 180

Query: 191 XXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLL 235
           XXXXXXXXXXXXXXXXXXX VPVDCFI L+ ISP+LQIK   LL
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXVPVDCFIALLTISPALQIKPMELL 215

[Close]

BLAST of MELO3C020856.2 vs. TAIR10
Match: AT5G25350.1 (EIN3-binding F box protein 2)

HSP 1 Score: 41.6 bits (96), Expect = 8.1e-04
Identity = 27/88 (30.68%), Postives = 47/88 (53.41%), Query Frame = 0


Query: 69  KSLSFAGWKMDDN-STARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSI 128
           +SL+  G K   N S   + ++ YS+ +LDIS +     ++DHG+  ++ +    NL+ +
Sbjct: 515 ESLNLDGCKNITNASLVAVAKNCYSVNDLDISNT----LVSDHGIKALASSPNHLNLQVL 574

Query: 129 SLWGMAGITDKGVVQLISRANSLQNLNI 156
           S+ G + ITDK    +     +L  LNI
Sbjct: 575 SIGGCSSITDKSKACIQKLGRTLLGLNI 598

[Close]

BLAST of MELO3C020856.2 vs. Swiss-Prot
Match: sp|Q9FH99|FB302_ARATH (F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.9e-67
Identity = 151/224 (67.41%), Postives = 182/224 (81.25%), Query Frame = 0


Query: 11  MELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEGVKLSLGRRKS 70
           M+ E  IDRLP+DLLA+IF++ TSFT LAQ         A GVC+KW++ V  S+ RR++
Sbjct: 1   MDEEAAIDRLPLDLLAYIFSLATSFTVLAQ---------ASGVCKKWRKAVNQSMARRET 60

Query: 71  LSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISLW 130
           LSFAGWKMDD+ST+RL+  A++L+ELDISRSRWGC ITD+GLY+I+ A+C+ NL S+SLW
Sbjct: 61  LSFAGWKMDDDSTSRLVHLAFNLKELDISRSRWGCHITDNGLYQIASARCVSNLNSVSLW 120

Query: 131 GMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVXXXX 190
           GM  ITD GVVQLISR +SLQ+LNIGGTF+TD SL+AIA+ C  LKTI +W CRH XXXX
Sbjct: 121 GMTAITDSGVVQLISRTSSLQHLNIGGTFITDESLFAIAERCHQLKTIGMWCCRHXXXXX 180

Query: 191 XXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLL 235
           XXXXXXXXXXXXXXXXXXX VPVDCFI L+ ISP+LQIK   LL
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXVPVDCFIALLTISPALQIKPMELL 215

[Close]

BLAST of MELO3C020856.2 vs. TrEMBL
Match: tr|A0A1S4E1P2|A0A1S4E1P2_CUCME (F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 9.2e-111
Identity = 232/241 (96.27%), Postives = 232/241 (96.27%), Query Frame = 0


Query: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEG 60
           MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 60

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120
           VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC
Sbjct: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120

Query: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180
           IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL
Sbjct: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180

Query: 181 WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMWPV 240
           WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMWPV
Sbjct: 181 WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMWPV 232

Query: 241 V 242
           V
Sbjct: 241 V 232

[Close]

BLAST of MELO3C020856.2 vs. TrEMBL
Match: tr|A0A0A0LPU5|A0A0A0LPU5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G279180 PE=4 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 2.5e-108
Identity = 229/241 (95.02%), Postives = 229/241 (95.02%), Query Frame = 0


Query: 1   MDSDVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEG 60
           MDS VVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ         ACGVCRKWKEG
Sbjct: 4   MDSAVVWSVEMELEPEIDRLPIDLLAHIFAMITSFTDLAQ---------ACGVCRKWKEG 63

Query: 61  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKC 120
           VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGC ITDHGLYEISLAKC
Sbjct: 64  VKLSLGRRKSLSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCHITDHGLYEISLAKC 123

Query: 121 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 180
           IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL
Sbjct: 124 IPNLKSISLWGMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVL 183

Query: 181 WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMWPV 240
           WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMW V
Sbjct: 184 WSCRHVXXXXXXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLNSMWSV 235

Query: 241 V 242
           V
Sbjct: 244 V 235

[Close]

BLAST of MELO3C020856.2 vs. TrEMBL
Match: tr|W9SXB4|W9SXB4_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001772 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.2e-81
Identity = 176/224 (78.57%), Postives = 194/224 (86.61%), Query Frame = 0


Query: 11  MELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEGVKLSLGRRKS 70
           ME E EIDRLPIDLLAHIFAMITSFTDLAQ         A  VCRKWK+GVK SLGRR++
Sbjct: 1   MEGEAEIDRLPIDLLAHIFAMITSFTDLAQ---------ASSVCRKWKKGVKQSLGRREN 60

Query: 71  LSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISLW 130
           LSFAGWKMDD+STARL+RHAYSL+ELDISRSRWGCQI+D+GLY+ISLAKC+ NL SISLW
Sbjct: 61  LSFAGWKMDDDSTARLVRHAYSLKELDISRSRWGCQISDNGLYQISLAKCVSNLTSISLW 120

Query: 131 GMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVXXXX 190
           GM GITDKGV+QLISRA SL++LNIGGTF+TD SLYAIAD CP LK+IVLWSCRHV    
Sbjct: 121 GMTGITDKGVLQLISRAKSLRHLNIGGTFITDESLYAIADGCPQLKSIVLWSCRHVSENG 180

Query: 191 XXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLL 235
            XXXXXXXXXXXXXXXXX RVPVDCFI L+ I P+LQIK+RSLL
Sbjct: 181 LXXXXXXXXXXXXXXXXXTRVPVDCFIVLLTIRPALQIKTRSLL 215

[Close]

BLAST of MELO3C020856.2 vs. TrEMBL
Match: tr|A0A2P4JKL0|A0A2P4JKL0_QUESU (F-box protein OS=Quercus suber OX=58331 GN=CFP56_48438 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.9e-80
Identity = 179/232 (77.16%), Postives = 203/232 (87.50%), Query Frame = 0


Query: 14  EPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEGVKLSLGRRKSLSF 73
           E EIDRLPIDLLAHIF +ITSFTDLAQ         A  VC+KWK+GVK SL RR++LSF
Sbjct: 4   EAEIDRLPIDLLAHIFVLITSFTDLAQ---------ARSVCKKWKQGVKQSLARRETLSF 63

Query: 74  AGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISLWGMA 133
           AGWKMDD+STARL+RHAY+L+ELDISRSRWGCQI+D+GL +ISLAKC+ NL SISLWGM 
Sbjct: 64  AGWKMDDDSTARLVRHAYNLKELDISRSRWGCQISDNGLCQISLAKCVSNLTSISLWGMT 123

Query: 134 GITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVXXXXXXX 193
           GITDKGVVQLISRANSLQ+LNIGGTF+TD SL+AIA+SCP+LKTIVLWSCRH XXXXXXX
Sbjct: 124 GITDKGVVQLISRANSLQHLNIGGTFITDESLFAIANSCPHLKTIVLWSCRHXXXXXXXX 183

Query: 194 XXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSLLN----SMWPVV 242
           XXXXXXXXXXXXXXXX  PVDCF+GL+ ISP+LQIKSR +L+    S+WPVV
Sbjct: 184 XXXXXXXXXXXXXXXXXXPVDCFLGLLTISPALQIKSRLMLDVGSASLWPVV 226

[Close]

BLAST of MELO3C020856.2 vs. TrEMBL
Match: tr|A0A1R3K4F9|A0A1R3K4F9_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_11446 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 3.8e-80
Identity = 179/223 (80.27%), Postives = 197/223 (88.34%), Query Frame = 0


Query: 11  MELEPEIDRLPIDLLAHIFAMITSFTDLAQVYAIVEKRRACGVCRKWKEGVKLSLGRRKS 70
           ME E EIDRLPIDLLAHI  MITSFTDLAQ         A GVCRKW++GVK +L RR++
Sbjct: 1   MEEEAEIDRLPIDLLAHILVMITSFTDLAQ---------ASGVCRKWRQGVKQALARRET 60

Query: 71  LSFAGWKMDDNSTARLIRHAYSLRELDISRSRWGCQITDHGLYEISLAKCIPNLKSISLW 130
           LSFAG KMDD+STARL+RHAYSL+ELDISRSRWGCQITD GLY+ISLAKC+ NL S+SLW
Sbjct: 61  LSFAGCKMDDDSTARLVRHAYSLKELDISRSRWGCQITDDGLYKISLAKCVSNLTSVSLW 120

Query: 131 GMAGITDKGVVQLISRANSLQNLNIGGTFVTDVSLYAIADSCPNLKTIVLWSCRHVXXXX 190
           GM GITDKGVVQLI+RANSLQ+LN+GGTF+TD SL AIADSCP LKTIVLWSCRHVXXXX
Sbjct: 121 GMTGITDKGVVQLITRANSLQHLNVGGTFITDESLSAIADSCPRLKTIVLWSCRHVXXXX 180

Query: 191 XXXXXXXXXXXXXXXXXXXRVPVDCFIGLVAISPSLQIKSRSL 234
           XXXXXXXXXXXXXXXXXXXRVP+DCFIGLVAISP+LQIK + L
Sbjct: 181 XXXXXXXXXXXXXXXXXXXRVPLDCFIGLVAISPALQIKPKGL 214

The following BLAST results are available for this feature:

BLAST of MELO3C020856.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457759.1	1.4e-110	96.27	PREDICTED: F-box protein At5g67140 [Cucumis melo] >XP_008457760.1 PREDICTED: F-b...	[more]
XP_004149695.1	3.8e-108	95.02	PREDICTED: F-box protein At5g67140-like [Cucumis sativus] >KGN61981.1 hypothetic...	[more]
XP_022947259.1	5.5e-99	88.43	F-box protein At5g67140 [Cucurbita moschata]	[more]
XP_023533904.1	3.6e-98	88.02	F-box protein At5g67140 [Cucurbita pepo subsp. pepo]	[more]
XP_023006941.1	4.6e-98	88.02	F-box protein At5g67140 [Cucurbita maxima]	[more]

BLAST of MELO3C020856.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G67140.1	1.6e-68	67.41	F-box/RNI-like superfamily protein	[more]
AT5G25350.1	8.1e-04	30.68	EIN3-binding F box protein 2	[more]

BLAST of MELO3C020856.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FH99\|FB302_ARATH	2.9e-67	67.41	F-box protein At5g67140 OS=Arabidopsis thaliana OX=3702 GN=At5g67140 PE=2 SV=1	[more]

BLAST of MELO3C020856.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E1P2\|A0A1S4E1P2_CUCME	9.2e-111	96.27	F-box protein At5g67140 OS=Cucumis melo OX=3656 GN=LOC103497375 PE=4 SV=1	[more]
tr\|A0A0A0LPU5\|A0A0A0LPU5_CUCSA	2.5e-108	95.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G279180 PE=4 SV=1	[more]
tr\|W9SXB4\|W9SXB4_9ROSA	1.2e-81	78.57	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_001772 PE=4 SV=1	[more]
tr\|A0A2P4JKL0\|A0A2P4JKL0_QUESU	2.9e-80	77.16	F-box protein OS=Quercus suber OX=58331 GN=CFP56_48438 PE=4 SV=1	[more]
tr\|A0A1R3K4F9\|A0A1R3K4F9_9ROSI	3.8e-80	80.27	Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_11446 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf
IPR006553	Leu-rich_rpt_Cys-con_subtyp

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020856.2.1	MELO3C020856.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 172..197 e-value: 5.8E-4 score: 29.2 coord: 147..171 e-value: 11.0 score: 14.2 coord: 121..146 e-value: 1.4 score: 17.9 coord: 90..118 e-value: 150.0 score: 5.4
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 12..233 e-value: 5.1E-33 score: 116.4
None	No IPR available	PANTHER	PTHR45100	FAMILY NOT NAMED	coord: 12..234
None	No IPR available	SUPERFAMILY	SSF52047	RNI-like	coord: 82..218

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020856.2	Cucumber (Gy14) v2	cgybmedB079
MELO3C020856.2	Cucumber (Gy14) v2	cgybmedB378
MELO3C020856.2	Cucumber (Gy14) v2	cgybmedB380
MELO3C020856.2	Cucumber (Gy14) v1	cgymedB122
MELO3C020856.2	Cucumber (Gy14) v1	cgymedB594
MELO3C020856.2	Cucurbita maxima (Rimu)	cmamedB577
MELO3C020856.2	Cucurbita maxima (Rimu)	cmamedB618
MELO3C020856.2	Cucurbita maxima (Rimu)	cmamedB882
MELO3C020856.2	Cucurbita moschata (Rifu)	cmomedB565
MELO3C020856.2	Cucurbita moschata (Rifu)	cmomedB607
MELO3C020856.2	Cucurbita moschata (Rifu)	cmomedB874
MELO3C020856.2	Cucurbita pepo (Zucchini)	cpemedB310
MELO3C020856.2	Cucurbita pepo (Zucchini)	cpemedB515
MELO3C020856.2	Cucurbita pepo (Zucchini)	cpemedB794
MELO3C020856.2	Cucurbita pepo (Zucchini)	cpemedB805
MELO3C020856.2	Wild cucumber (PI 183967)	cpimedB082
MELO3C020856.2	Wild cucumber (PI 183967)	cpimedB425
MELO3C020856.2	Wild cucumber (PI 183967)	cpimedB430
MELO3C020856.2	Cucumber (Chinese Long) v2	cumedB082
MELO3C020856.2	Cucumber (Chinese Long) v2	cumedB415
MELO3C020856.2	Cucumber (Chinese Long) v2	cumedB421
MELO3C020856.2	Melon (DHL92) v3.6.1	medmedB059
MELO3C020856.2	Bottle gourd (USVL1VR-Ls)	lsimedB056
MELO3C020856.2	Bottle gourd (USVL1VR-Ls)	lsimedB135
MELO3C020856.2	Bottle gourd (USVL1VR-Ls)	lsimedB137
MELO3C020856.2	Watermelon (Charleston Gray)	medwcgB083
MELO3C020856.2	Watermelon (Charleston Gray)	medwcgB102
MELO3C020856.2	Watermelon (97103) v1	medwmB116
MELO3C020856.2	Silver-seed gourd	carmedB0419
MELO3C020856.2	Silver-seed gourd	carmedB0812
MELO3C020856.2	Silver-seed gourd	carmedB1042
MELO3C020856.2	Cucumber (Chinese Long) v3	cucmedB095
MELO3C020856.2	Cucumber (Chinese Long) v3	cucmedB432
MELO3C020856.2	Watermelon (97103) v2	medwmbB072
MELO3C020856.2	Watermelon (97103) v2	medwmbB101
MELO3C020856.2	Wax gourd	medwgoB116