MELO3C020632.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C020632.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionRING-H2 finger protein ATL64-like
Locationchr12 : 1725495 .. 1725848 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCTTCTTTTTGTACTTCTTTTAGTCATTGCCATTTTATATGGCAGACGATCTGCCAAATCTGACGAGGAAGAGTTGTCGAAGAATCTGGACATTCAAGCATCGGTGTTTCATTATGGCGTAGATGGAGACGACGAACAAGAATGTGCAATTTGCCTTTGTGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATGAAGATGTGTGGTCACGTGTTCCATAAAGACTGCATCGACAGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATCGCAGTGAAAATGCCATGGCTTCTTCTTCATCCTTTCCGACCCTCTTGAACTGA

mRNA sequence

ATGGTTCTTCTTTTTGTACTTCTTTTAGTCATTGCCATTTTATATGGCAGACGATCTGCCAAATCTGACGAGGAAGAGTTGTCGAAGAATCTGGACATTCAAGCATCGGTGTTTCATTATGGCGTAGATGGAGACGACGAACAAGAATGTGCAATTTGCCTTTGTGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATGAAGATGTGTGGTCACGTGTTCCATAAAGACTGCATCGACAGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATCGCAGTGAAAATGCCATGGCTTCTTCTTCATCCTTTCCGACCCTCTTGAACTGA

Coding sequence (CDS)

ATGGTTCTTCTTTTTGTACTTCTTTTAGTCATTGCCATTTTATATGGCAGACGATCTGCCAAATCTGACGAGGAAGAGTTGTCGAAGAATCTGGACATTCAAGCATCGGTGTTTCATTATGGCGTAGATGGAGACGACGAACAAGAATGTGCAATTTGCCTTTGTGAAATTGAAGAAGGAGAGAAGTGTAGAAAGATGAAGATGTGTGGTCACGTGTTCCATAAAGACTGCATCGACAGGTGGTTTACGGTGGAGCTCCATTGTCCACTTTGTCGGACGTCGGTTTGTGTGGTAGTTGATCGCAGTGAAAATGCCATGGCTTCTTCTTCATCCTTTCCGACCCTCTTGAACTGA

Protein sequence

MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN
Homology
[Close]
BLAST of MELO3C020632.2 vs. NCBI nr
Match: XP_008457568.1 (PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo])

HSP 1 Score: 240.7 bits (613), Expect = 2.4e-60
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG
Sbjct: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60

Query: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 118
           EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN
Sbjct: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 117

[Close]
BLAST of MELO3C020632.2 vs. NCBI nr
Match: XP_008457567.1 (PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo])

HSP 1 Score: 204.5 bits (519), Expect = 1.9e-49
Identity = 93/104 (89.42%), Postives = 98/104 (94.23%), Query Frame = 0 

Query: 14  LYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVF 73
           L G+RSAKSDE+ELSKNL+IQA +FHYG+DGDDEQECAICLCEIEEGEKCRKMK CGH F
Sbjct: 52  LCGKRSAKSDEKELSKNLNIQAPIFHYGIDGDDEQECAICLCEIEEGEKCRKMKTCGHAF 111

Query: 74  HKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 118
           HKDCIDRWFTVELHCPLCRTS CVVVDRSEN MASSSSFPTLLN
Sbjct: 112 HKDCIDRWFTVELHCPLCRTSGCVVVDRSENVMASSSSFPTLLN 155

[Close]
BLAST of MELO3C020632.2 vs. NCBI nr
Match: XP_008457566.1 (PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo])

HSP 1 Score: 198.0 bits (502), Expect = 1.8e-47
Identity = 93/103 (90.29%), Postives = 97/103 (94.17%), Query Frame = 0 

Query: 16  GRRSAKSDEEE-LSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVFH 75
           G+RSAKSDEEE LSKN+DIQA +FHY VDGD EQECAICLCEIEEGEKCRK+K CGHVFH
Sbjct: 54  GKRSAKSDEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFH 113

Query: 76  KDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 118
           KDCIDRWFTVELHCPLCRTSVCVVVD SENAMASSSSFPTLLN
Sbjct: 114 KDCIDRWFTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 156

[Close]
BLAST of MELO3C020632.2 vs. NCBI nr
Match: KGN44779.1 (hypothetical protein Csa_7G387140 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.8e-39
Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 0 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHY-GVDGDDEQECAICLCEIEE 60
           M+LL VL   I IL  +RSAKSD EEL +NLDI+A +FHY GV+G DEQECAICLCEIEE
Sbjct: 39  MLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYNGVEG-DEQECAICLCEIEE 98

Query: 61  GEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVC-VVVDRSENAMASSSSFPT 115
           GEKCRKMK CGHVFHKDCIDRWF V+ HCP+CRTSVC VVVD   NAMASSSS PT
Sbjct: 99  GEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPT 153

[Close]
BLAST of MELO3C020632.2 vs. NCBI nr
Match: XP_011659772.1 (PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.8e-39
Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 0 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHY-GVDGDDEQECAICLCEIEE 60
           M+LL VL   I IL  +RSAKSD EEL +NLDI+A +FHY GV+G DEQECAICLCEIEE
Sbjct: 29  MLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYNGVEG-DEQECAICLCEIEE 88

Query: 61  GEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVC-VVVDRSENAMASSSSFPT 115
           GEKCRKMK CGHVFHKDCIDRWF V+ HCP+CRTSVC VVVD   NAMASSSS PT
Sbjct: 89  GEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPT 143

[Close]
BLAST of MELO3C020632.2 vs. TAIR10
Match: AT1G04360.1 (RING/U-box superfamily protein)

HSP 1 Score: 67.8 bits (164), Expect = 5.1e-12
Identity = 36/97 (37.11%), Postives = 50/97 (51.55%), Query Frame = 0 

Query: 15  YGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVFH 74
           + +R   + EE+ SKN                 QEC++CL E +E EK R +  C HVFH
Sbjct: 115 FKKRDVVAGEEDQSKN----------------SQECSVCLNEFQEDEKLRIIPNCCHVFH 174

Query: 75  KDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSS 112
            DCID W     +CPLCRTSV      + + +++ SS
Sbjct: 175 IDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSS 195

[Close]
BLAST of MELO3C020632.2 vs. TAIR10
Match: AT3G62690.1 (AtL5)

HSP 1 Score: 67.0 bits (162), Expect = 8.7e-12
Identity = 29/61 (47.54%), Postives = 37/61 (60.66%), Query Frame = 0 

Query: 37  VFHYGVDGDDE--QECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTS 96
           +F Y V   +   +EC++CL E EE ++ R +  CGHVFH DCID WF     CPLCR  
Sbjct: 98  IFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAP 157

[Close]
BLAST of MELO3C020632.2 vs. TAIR10
Match: AT4G35480.1 (RING-H2 finger A3B)

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-11
Identity = 26/50 (52.00%), Postives = 31/50 (62.00%), Query Frame = 0 

Query: 43  DGDDEQECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCR 93
           DGD   ECAIC+ E  EGE+ R + +C H FH  CID+W T    CP CR
Sbjct: 106 DGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155

[Close]
BLAST of MELO3C020632.2 vs. TAIR10
Match: AT1G53820.1 (RING/U-box superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11
Identity = 28/58 (48.28%), Postives = 35/58 (60.34%), Query Frame = 0 

Query: 43  DGDDEQECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVD 101
           D  D  ECA+CL ++ +G+K R +  C H FH DCID WF     CPLCR +V  V D
Sbjct: 113 DFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVED 170

[Close]
BLAST of MELO3C020632.2 vs. TAIR10
Match: AT2G47560.1 (RING/U-box superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 3.3e-11
Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 0 

Query: 50  CAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSV---CVVVDRSENAM 109
           C++CL E EE ++ R +  CGH FH DCID WF     CPLCR  V     V++   ++ 
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSS 167

Query: 110 ASSSSFPT 115
           +S  +FPT
Sbjct: 168 SSPLTFPT 175

[Close]
BLAST of MELO3C020632.2 vs. Swiss-Prot
Match: sp|P93823|ATL1_ARATH (RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.2e-11
Identity = 36/97 (37.11%), Postives = 50/97 (51.55%), Query Frame = 0 

Query: 15  YGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVFH 74
           + +R   + EE+ SKN                 QEC++CL E +E EK R +  C HVFH
Sbjct: 115 FKKRDVVAGEEDQSKN----------------SQECSVCLNEFQEDEKLRIIPNCCHVFH 174

Query: 75  KDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSS 112
            DCID W     +CPLCRTSV      + + +++ SS
Sbjct: 175 IDCIDIWLQGNANCPLCRTSVSCEASFTLDLISAPSS 195

[Close]
BLAST of MELO3C020632.2 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-10
Identity = 29/61 (47.54%), Postives = 37/61 (60.66%), Query Frame = 0 

Query: 37  VFHYGVDGDDE--QECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTS 96
           +F Y V   +   +EC++CL E EE ++ R +  CGHVFH DCID WF     CPLCR  
Sbjct: 98  IFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAP 157

[Close]
BLAST of MELO3C020632.2 vs. Swiss-Prot
Match: sp|Q9ZT49|ATL45_ARATH (Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=ATL45 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-10
Identity = 26/50 (52.00%), Postives = 31/50 (62.00%), Query Frame = 0 

Query: 43  DGDDEQECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCR 93
           DGD   ECAIC+ E  EGE+ R + +C H FH  CID+W T    CP CR
Sbjct: 106 DGDSSTECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155

[Close]
BLAST of MELO3C020632.2 vs. Swiss-Prot
Match: sp|P0C035|ATL60_ARATH (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.0e-10
Identity = 28/58 (48.28%), Postives = 35/58 (60.34%), Query Frame = 0 

Query: 43  DGDDEQECAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVD 101
           D  D  ECA+CL ++ +G+K R +  C H FH DCID WF     CPLCR +V  V D
Sbjct: 113 DFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVED 170

[Close]
BLAST of MELO3C020632.2 vs. Swiss-Prot
Match: sp|O22255|ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 6.0e-10
Identity = 29/68 (42.65%), Postives = 40/68 (58.82%), Query Frame = 0 

Query: 50  CAICLCEIEEGEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSV---CVVVDRSENAM 109
           C++CL E EE ++ R +  CGH FH DCID WF     CPLCR  V     V++   ++ 
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSS 167

Query: 110 ASSSSFPT 115
           +S  +FPT
Sbjct: 168 SSPLTFPT 175

[Close]
BLAST of MELO3C020632.2 vs. TrEMBL
Match: tr|A0A1S3C5E4|A0A1S3C5E4_CUCME (RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497234 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 1.6e-60
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60
           MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG
Sbjct: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEG 60

Query: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 118
           EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN
Sbjct: 61  EKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 117

[Close]
BLAST of MELO3C020632.2 vs. TrEMBL
Match: tr|A0A1S3C741|A0A1S3C741_CUCME (RING-H2 finger protein ATL63-like OS=Cucumis melo OX=3656 GN=LOC103497233 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 1.3e-49
Identity = 93/104 (89.42%), Postives = 98/104 (94.23%), Query Frame = 0 

Query: 14  LYGRRSAKSDEEELSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVF 73
           L G+RSAKSDE+ELSKNL+IQA +FHYG+DGDDEQECAICLCEIEEGEKCRKMK CGH F
Sbjct: 52  LCGKRSAKSDEKELSKNLNIQAPIFHYGIDGDDEQECAICLCEIEEGEKCRKMKTCGHAF 111

Query: 74  HKDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 118
           HKDCIDRWFTVELHCPLCRTS CVVVDRSEN MASSSSFPTLLN
Sbjct: 112 HKDCIDRWFTVELHCPLCRTSGCVVVDRSENVMASSSSFPTLLN 155

[Close]
BLAST of MELO3C020632.2 vs. TrEMBL
Match: tr|A0A1S3C6H2|A0A1S3C6H2_CUCME (RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497232 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.2e-47
Identity = 93/103 (90.29%), Postives = 97/103 (94.17%), Query Frame = 0 

Query: 16  GRRSAKSDEEE-LSKNLDIQASVFHYGVDGDDEQECAICLCEIEEGEKCRKMKMCGHVFH 75
           G+RSAKSDEEE LSKN+DIQA +FHY VDGD EQECAICLCEIEEGEKCRK+K CGHVFH
Sbjct: 54  GKRSAKSDEEESLSKNIDIQAPIFHYSVDGDIEQECAICLCEIEEGEKCRKIKTCGHVFH 113

Query: 76  KDCIDRWFTVELHCPLCRTSVCVVVDRSENAMASSSSFPTLLN 118
           KDCIDRWFTVELHCPLCRTSVCVVVD SENAMASSSSFPTLLN
Sbjct: 114 KDCIDRWFTVELHCPLCRTSVCVVVDCSENAMASSSSFPTLLN 156

[Close]
BLAST of MELO3C020632.2 vs. TrEMBL
Match: tr|A0A0A0K790|A0A0A0K790_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.2e-39
Identity = 88/116 (75.86%), Postives = 96/116 (82.76%), Query Frame = 0 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHY-GVDGDDEQECAICLCEIEE 60
           M+LL VL   I IL  +RSAKSD EEL +NLDI+A +FHY GV+G DEQECAICLCEIEE
Sbjct: 39  MLLLIVLFSFILILCRKRSAKSDGEELPENLDIEAPIFHYNGVEG-DEQECAICLCEIEE 98

Query: 61  GEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVC-VVVDRSENAMASSSSFPT 115
           GEKCRKMK CGHVFHKDCIDRWF V+ HCP+CRTSVC VVVD   NAMASSSS PT
Sbjct: 99  GEKCRKMKTCGHVFHKDCIDRWFKVDGHCPICRTSVCVVVVDHGGNAMASSSSLPT 153

[Close]
BLAST of MELO3C020632.2 vs. TrEMBL
Match: tr|A0A0A0LUU6|A0A0A0LUU6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G512470 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 7.8e-39
Identity = 87/116 (75.00%), Postives = 94/116 (81.03%), Query Frame = 0 

Query: 1   MVLLFVLLLVIAILYGRRSAKSDEEELSKNLDIQASVFHY-GVDGDDEQECAICLCEIEE 60
           M+LL VL L IAIL  +RSAK D EE S NLDI+A +FHY GV+G  EQEC ICLCEIEE
Sbjct: 8   MLLLIVLFLFIAILCTKRSAKYDGEESSDNLDIEAPIFHYSGVEG-GEQECVICLCEIEE 67

Query: 61  GEKCRKMKMCGHVFHKDCIDRWFTVELHCPLCRTSVC-VVVDRSENAMASSSSFPT 115
           GEKCRKMK CGHVFHKDCIDRWF V  HCP+CRTSVC VV+DR  NAMASSSS PT
Sbjct: 68  GEKCRKMKTCGHVFHKDCIDRWFKVNGHCPICRTSVCMVVIDRGGNAMASSSSLPT 122

The following BLAST results are available for this feature:
BLAST of MELO3C020632.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008457568.12.4e-60100.00PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo][more]
XP_008457567.11.9e-4989.42PREDICTED: RING-H2 finger protein ATL63-like [Cucumis melo][more]
XP_008457566.11.8e-4790.29PREDICTED: RING-H2 finger protein ATL64-like [Cucumis melo][more]
KGN44779.11.8e-3975.86hypothetical protein Csa_7G387140 [Cucumis sativus][more]
XP_011659772.11.8e-3975.86PREDICTED: RING-H2 finger protein ATL39-like [Cucumis sativus][more]
BLAST of MELO3C020632.2 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04360.15.1e-1237.11RING/U-box superfamily protein[more]
AT3G62690.18.7e-1247.54AtL5[more]
AT4G35480.11.1e-1152.00RING-H2 finger A3B[more]
AT1G53820.13.3e-1148.28RING/U-box superfamily protein[more]
AT2G47560.13.3e-1142.65RING/U-box superfamily protein[more]
BLAST of MELO3C020632.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P93823|ATL1_ARATH9.2e-1137.11RING-H2 finger protein ATL1 OS=Arabidopsis thaliana OX=3702 GN=ATL1 PE=2 SV=1[more]
sp|Q9LZJ6|ATL5_ARATH1.6e-1047.54RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1[more]
sp|Q9ZT49|ATL45_ARATH2.1e-1052.00Probable E3 ubiquitin-protein ligase ATL45 OS=Arabidopsis thaliana OX=3702 GN=AT... [more]
sp|P0C035|ATL60_ARATH6.0e-1048.28RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1[more]
sp|O22255|ATL64_ARATH6.0e-1042.65RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1[more]
BLAST of MELO3C020632.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C5E4|A0A1S3C5E4_CUCME1.6e-60100.00RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497234 PE=4 S... [more]
tr|A0A1S3C741|A0A1S3C741_CUCME1.3e-4989.42RING-H2 finger protein ATL63-like OS=Cucumis melo OX=3656 GN=LOC103497233 PE=4 S... [more]
tr|A0A1S3C6H2|A0A1S3C6H2_CUCME1.2e-4790.29RING-H2 finger protein ATL64-like OS=Cucumis melo OX=3656 GN=LOC103497232 PE=4 S... [more]
tr|A0A0A0K790|A0A0A0K790_CUCSA1.2e-3975.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387140 PE=4 SV=1[more]
tr|A0A0A0LUU6|A0A0A0LUU6_CUCSA7.8e-3975.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G512470 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020632.2.1MELO3C020632.2.1mRNA


InterPro
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 50..91
e-value: 7.2E-5
score: 32.2
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 48..92
e-value: 5.2E-13
score: 49.0
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 50..92
score: 12.548
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 15..97
e-value: 2.1E-19
score: 70.9
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 27..102
NoneNo IPR availablePANTHERPTHR14155:SF283SUBFAMILY NOT NAMEDcoord: 27..102
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 41..99

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C020632.2Cucsa.117930Cucumber (Gy14) v1cgymedB172
MELO3C020632.2Lsi02G013590Bottle gourd (USVL1VR-Ls)lsimedB183
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020632.2Silver-seed gourdcarmedB0392
MELO3C020632.2Silver-seed gourdcarmedB0451
MELO3C020632.2Cucumber (Chinese Long) v3cucmedB028
MELO3C020632.2Cucumber (Chinese Long) v3cucmedB023
MELO3C020632.2Watermelon (97103) v2medwmbB142
MELO3C020632.2Wax gourdmedwgoB164
MELO3C020632.2Cucumber (Gy14) v2cgybmedB021
MELO3C020632.2Cucurbita maxima (Rimu)cmamedB215
MELO3C020632.2Cucurbita maxima (Rimu)cmamedB451
MELO3C020632.2Cucurbita moschata (Rifu)cmomedB203
MELO3C020632.2Cucurbita moschata (Rifu)cmomedB439
MELO3C020632.2Cucurbita pepo (Zucchini)cpemedB561
MELO3C020632.2Cucurbita pepo (Zucchini)cpemedB581
MELO3C020632.2Cucumber (Chinese Long) v2cumedB023
MELO3C020632.2Wild cucumber (PI 183967)cpimedB024
MELO3C020632.2Watermelon (Charleston Gray)medwcgB141
MELO3C020632.2Watermelon (97103) v1medwmB143