MELO3C020487.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGCTGTTCTCTATTTTGATCAAGGGTAACTTTGGAATCAGGGCAATTTTAATTGAAATCTTGCAAAATCCGACCTATTTTAGTTGGAAATTTTTCTTGCGTGTGTGTGAGAGATTATCCACAATGGCGCTTCGAATTCTAGGCAGGAAAAACCTAATTCCTACATTTTCTGGAGGGTTAGGGTCTGGACATCTCCGCGGCCTGCAGACCTTCTCCTTGCCCGACCTCGCTTATGACTATGGCGCTCTTGAGCCCGTCATCAATGCGGAAATTATGCAGCTTCATCATCAGAAGCATCATCAAGCCTACATCACCAACTACAACAAGGCTCTTGAGCAACTTCACGAGGCCATCAACAAAGGCCACACCTCCACCGTAGTCAAATTGCAGAGTGCCATCAAATTCAATGGCGGAGGTTTTCTTTTATTTCTGGACGTCTTTTGATTTTCAGACTTTGATATAAGTTATACTTTCTCATTTGTATGGTACATTAAATCAGATCGAGTCAATCAATTGGGAAATCGTTCGACGCTCATTGAGTAGATTAAGATATGTATATATATATCATTTCTCAACTTGTTAACTGATCCTTTTCTTTTTAAGGTCACATTAATCATTCGATTTTTTGGAATAATCTGGCCCCAATTCATGTAAGTTTCAATCCTTACGACTCTGATTCGATGATGTTTCAGTCTATCTATTCTCTTCTTTAATATATTTGCAGGAAGGGGGTGGTGAGCCTCCAAAGGGATCTCTAGGATGGGCAATCGACTCCCAGTTCGGTTCTCTTGAAGCCTTGATTCAGAGAGTCAATGCAGAAGGTGCTGCTTTACAGGGCTCTGGATGGGTGGTATGTTTTCCTCCTATTTATTTGCTTTTTTTTTTCTTTTGTCTGCCACGTAATACACTACAGACGTTTAACTGAAGCTTTTTCGAGTTCTTTCTAGTGGCTTGCTCTGGATAAAGAACTAAAGAAGCTATCTGTTGAAACCACGGCCAATCAGGTATATCTCCAAGTTTATTTGCTTAGAAGCCATATCCATGTTCCTGAAGTTGTATTTAGTTGCCCAATTATTTCGCCTTACTCAAGTTTGTTATTATTGTCATGGGTGTTGTGGGGTAAGAGGAATAGTAGGGTATTTATGGGGGTTGAGAGGAATGTTAGAGAAATTTGGTCTCTGGTTCGTTTTCATGTTTCTCATTGAGTTTCAATTTCAAAAATCTTTTGTGATTATTCAATTGGCATGTTTTGCACAGATGGAGTTCTCTTTTTTTTGTAGAGAGAGTCCTTTTTTAGGGCTTGGTTTTTGTATGCTCGTGTATTCTTTCATTTCTGTTCAATGAAAGTTTTTTCGTATCATATGTATACATATCATTGGCTTGTAAAATTTTGGGCAAAATGCACTTTTGGTCTCTAGAATTTGAGGATAGTGTTTATTTGGTTCTTAAAGTTTAAAATGAACACTTTTCCCCAAGGTTTAGAAGTGAAAAAGTGACATGGCATATTGAATTGACAATGTCAAATAAGTTGACATTATTTACTAATTTGTTGTTATTATTTTTAGTTAGACACTTGAATTTTCTACTTTCTATTTTTTGCCTTCTCTCTCTGTTTGAGAAATTTCCTTCTCTGTTTCTATTTCTCTCCTCCATTCTCCTTTTCTCACTCCCCACTATCTCCTAAAACCAAAACCATGGTTTTTGTAGAAACTTTCACAAAAAACAAAACTCAGTTTCAATTTGTAAAATGTTGAACCCTATATATATTTTTTTTTTCAGATTTGAAATTCTTGAAACAACAATTGTAGCTTCATATTTTGATTGAGCTTGTGCTTTTCCCTCAAATTCAAATGTCATGTTCATGGAGCATAAATTACTAATTAATTTTATTATAGAGCTTGTGCTTGTCACTAACCTCCTAAACATGCCCACTTGTATGAATGACCTAACTTGAACAATATTCAAGAAGATATAGGCAACTGGGTGATTCTGCATTGGGCGGAAGAAATCTAAGAAGATGTGAGCAAAATGGGCAACGAAATCGTTGAAGAAGATGTGGGGAACTTAGGGTCCTGAAATAAAAATAGAAAAAAAGGAAGAAAAAAAAGTTAGAAATGAGCTTTGCTTTCTATGAAGGTTTCTGCAAAAAAAAAAAAAGAAAAAATCCCCGTGGTTTTAGAGAGATGGTTGGGAGTGAGGAAGAGAAGGGATGAGAAAGCAAAATATATATATAGATATAGAAAGTAGAAAATTCCACTGCCTAGTTCAATAATAATAAAACAAAAAATAGTAAATAATGTCACCACAATAAAAATTTACCAATTCAATATGTCATGTCTATTTTTCATTAGTCAGCTCATGGTAAAATTAATTTAGGGACCATTTAGAAGTATTTAGGGACCAAATAGATACTAACCTCAAATCTAGGAGGCCATAAGTGCATTTTGTCCTAAATGGTTGATTGTATTTATAAGAGATTGAAATTTGGAAGTCATGTGGGTGATGCAACTCTTTGCAGGATCCACTTGTGACAAAAGGATCTTCTTTAGTGCCTCTGCTTGGGATTGATGTTTGGGAGCATGCATATTATTTGCAGGTAAATGTTTTCCATTTTCAACCCATTGGTAGTATGATTTGCTCTTGCTTTTTCCGAGTGTCTATCTGGATAAGATCATGTAGGGCGGTTGGGTTGCCTGGTAATGACCCATGACGTGGGTGGGAGCTTGGTGATAATGGTAAAGATGCATGCACATATTGATAAGCTATAGTGTAATATACTTTCTTATTTGGCCTGCAGCCATTAGATGGCTATTTTGCTGTTTGCTTAGTGTTTTGAACATTTTCATGGTGTAGTACAAAAATGTCAGACCAGACTATCTGAAGAACATTTGGAAGGTTATAAATTGGAAATATGCTGGTGAGATTTTTGCAAAAGAAGCTCCCCTGGTTGAGAGTCGTTAAGAGTTCCTTGGGGCTCTTTGTTGAGTCTTCTGTAAACCTTAGTTTGTTCTGGTGAACGTTGAATAATAAACATCCTTGTACGCATGGATGTTCAAGCCTTGTAATGAGATGAAATGTATATTTGTTCCAAGTACTCTGTTTGGGAAGATGATGAATGCATGAGGCCACGAGAGTTACCTTTTTCCAGTTATATCGTTTTCAGTTCATGTTTCTTTTATATTGATGGAGGGTATGATAGTATGCAACTTTATGGGTTGATG TTGGCTGTTCTCTATTTTGATCAAGGGTAACTTTGGAATCAGGGCAATTTTAATTGAAATCTTGCAAAATCCGACCTATTTTAGTTGGAAATTTTTCTTGCGTGTGTGTGAGAGATTATCCACAATGGCGCTTCGAATTCTAGGCAGGAAAAACCTAATTCCTACATTTTCTGGAGGGTTAGGGTCTGGACATCTCCGCGGCCTGCAGACCTTCTCCTTGCCCGACCTCGCTTATGACTATGGCGCTCTTGAGCCCGTCATCAATGCGGAAATTATGCAGCTTCATCATCAGAAGCATCATCAAGCCTACATCACCAACTACAACAAGGCTCTTGAGCAACTTCACGAGGCCATCAACAAAGGCCACACCTCCACCGTAGTCAAATTGCAGAGTGCCATCAAATTCAATGGCGGAGGTCACATTAATCATTCGATTTTTTGGAATAATCTGGCCCCAATTCATGAAGGGGGTGGTGAGCCTCCAAAGGGATCTCTAGGATGGGCAATCGACTCCCAGTTCGGTTCTCTTGAAGCCTTGATTCAGAGAGTCAATGCAGAAGGTGCTGCTTTACAGGGCTCTGGATGGGTGTGGCTTGCTCTGGATAAAGAACTAAAGAAGCTATCTGTTGAAACCACGGCCAATCAGGATCCACTTGTGACAAAAGGATCTTCTTTAGTGCCTCTGCTTGGGATTGATGTTTGGGAGCATGCATATTATTTGCAGGTAAATGTTTTCCATTTTCAACCCATTGGTAGTATGATTTGCTCTTGCTTTTTCCGAGTGTCTATCTGGATAAGATCATGTAGGGCGGTTGGGTTGCCTGGTAATGACCCATGACGTGGGTGGGAGCTTGGTGATAATGGTAAAGATGCATGCACATATTGATAAGCTATAGTGTAATATACTTTCTTATTTGGCCTGCAGCCATTAGATGGCTATTTTGCTGTTTGCTTAGTGTTTTGAACATTTTCATGGTGTAGTACAAAAATGTCAGACCAGACTATCTGAAGAACATTTGGAAGGTTATAAATTGGAAATATGCTGGTGAGATTTTTGCAAAAGAAGCTCCCCTGGTTGAGAGTCGTTAAGAGTTCCTTGGGGCTCTTTGTTGAGTCTTCTGTAAACCTTAGTTTGTTCTGGTGAACGTTGAATAATAAACATCCTTGTACGCATGGATGTTCAAGCCTTGTAATGAGATGAAATGTATATTTGTTCCAAGTACTCTGTTTGGGAAGATGATGAATGCATGAGGCCACGAGAGTTACCTTTTTCCAGTTATATCGTTTTCAGTTCATGTTTCTTTTATATTGATGGAGGGTATGATAGTATGCAACTTTATGGGTTGATG TGGCTGTTCTCTATTTTGATCAAGGGTAACTTTGGAATCAGGGCAATTTTAATTGAAATCTTGCAAAATCCGACCTATTTTAGTTGGAAATTTTTCTTGCGTGTGTGTGAGAGATTATCCACAATGGCGCTTCGAATTCTAGGCAGGAAAAACCTAATTCCTACATTTTCTGGAGGGTTAGGGTCTGGACATCTCCGCGGCCTGCAGACCTTCTCCTTGCCCGACCTCGCTTATGACTATGGCGCTCTTGAGCCCGTCATCAATGCGGAAATTATGCAGCTTCATCATCAGAAGCATCATCAAGCCTACATCACCAACTACAACAAGGCTCTTGAGCAACTTCACGAGGCCATCAACAAAGGCCACACCTCCACCGTAGTCAAATTGCAGAGTGCCATCAAATTCAATGGCGGAGGTCACATTAATCATTCGATTTTTTGGAATAATCTGGCCCCAATTCATGAAGGGGGTGGTGAGCCTCCAAAGGGATCTCTAGGATGGGCAATCGACTCCCAGTTCGGTTCTCTTGAAGCCTTGATTCAGAGAGTCAATGCAGAAGGTGCTGCTTTACAGGGCTCTGGATGGGTGTGGCTTGCTCTGGATAAAGAACTAAAGAAGCTATCTGTTGAAACCACGGCCAATCAGGATCCACTTGTGACAAAAGGATCTTCTTTAGTGCCTCTGCTTGGGATTGATGTTTGGGAGCATGCATATTATTTGCAGGTAAATGTTTTCCATTTTCAACCCATTGGTAGTATGATTTGCTCTTGCTTTTTCCGAGTGTCTATCTGGATAAGATCATGTAGGGCGGTTGGGTTGCCTGGTAATGACCCATGA WLFSILIKGNFGIRAILIEILQNPTYFSWKFFLRVCERLSTMALRILGRKNLIPTFSGGLGSGHLRGLQTFSLPDLAYDYGALEPVINAEIMQLHHQKHHQAYITNYNKALEQLHEAINKGHTSTVVKLQSAIKFNGGGHINHSIFWNNLAPIHEGGGEPPKGSLGWAIDSQFGSLEALIQRVNAEGAALQGSGWVWLALDKELKKLSVETTANQDPLVTKGSSLVPLLGIDVWEHAYYLQVNVFHFQPIGSMICSCFFRVSIWIRSCRAVGLPGNDP
BLAST of MELO3C020487.2 vs. NCBI nr
Match: XP_011649383.1 (PREDICTED: superoxide dismutase [Mn], mitochondrial-like isoform X1 [Cucumis sativus] >KGN63918.1 Superoxide dismutase [Mn] [Cucumis sativus]) HSP 1 Score: 414.1 bits (1063), Expect = 3.8e-112 Identity = 200/207 (96.62%), Postives = 204/207 (98.55%), Query Frame = 0
BLAST of MELO3C020487.2 vs. NCBI nr
Match: XP_008457297.1 (PREDICTED: superoxide dismutase [Mn], mitochondrial-like isoform X1 [Cucumis melo]) HSP 1 Score: 411.4 bits (1056), Expect = 2.5e-111 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of MELO3C020487.2 vs. NCBI nr
Match: APO14282.1 (superoxide dismutase [Luffa aegyptiaca]) HSP 1 Score: 393.7 bits (1010), Expect = 5.3e-106 Identity = 191/200 (95.50%), Postives = 192/200 (96.00%), Query Frame = 0
BLAST of MELO3C020487.2 vs. NCBI nr
Match: XP_022997719.1 (uncharacterized protein LOC111492594 [Cucurbita maxima]) HSP 1 Score: 392.5 bits (1007), Expect = 1.2e-105 Identity = 189/205 (92.20%), Postives = 195/205 (95.12%), Query Frame = 0
BLAST of MELO3C020487.2 vs. NCBI nr
Match: XP_023523564.1 (superoxide dismutase [Mn], mitochondrial-like [Cucurbita pepo subsp. pepo] >AXF54226.1 SOD [Cucurbita pepo]) HSP 1 Score: 383.6 bits (984), Expect = 5.5e-103 Identity = 184/200 (92.00%), Postives = 191/200 (95.50%), Query Frame = 0
BLAST of MELO3C020487.2 vs. TAIR10
Match: AT3G10920.1 (manganese superoxide dismutase 1) HSP 1 Score: 309.7 bits (792), Expect = 1.8e-84 Identity = 149/201 (74.13%), Postives = 169/201 (84.08%), Query Frame = 0
BLAST of MELO3C020487.2 vs. TAIR10
Match: AT3G56350.1 (Iron/manganese superoxide dismutase family protein) HSP 1 Score: 270.8 bits (691), Expect = 9.5e-73 Identity = 127/177 (71.75%), Postives = 145/177 (81.92%), Query Frame = 0
BLAST of MELO3C020487.2 vs. TAIR10
Match: AT5G23310.1 (Fe superoxide dismutase 3) HSP 1 Score: 96.3 bits (238), Expect = 3.2e-20 Identity = 61/192 (31.77%), Postives = 91/192 (47.40%), Query Frame = 0
BLAST of MELO3C020487.2 vs. TAIR10
Match: AT5G51100.1 (Fe superoxide dismutase 2) HSP 1 Score: 92.8 bits (229), Expect = 3.5e-19 Identity = 70/197 (35.53%), Postives = 89/197 (45.18%), Query Frame = 0
BLAST of MELO3C020487.2 vs. TAIR10
Match: AT4G25100.1 (Fe superoxide dismutase 1) HSP 1 Score: 91.7 bits (226), Expect = 7.9e-19 Identity = 63/178 (35.39%), Postives = 79/178 (44.38%), Query Frame = 0
BLAST of MELO3C020487.2 vs. Swiss-Prot
Match: sp|P35017|SODM_HEVBR (Superoxide dismutase [Mn], mitochondrial OS=Hevea brasiliensis OX=3981 GN=SODA PE=2 SV=1) HSP 1 Score: 331.3 bits (848), Expect = 1.1e-89 Identity = 162/201 (80.60%), Postives = 174/201 (86.57%), Query Frame = 0
BLAST of MELO3C020487.2 vs. Swiss-Prot
Match: sp|Q9SM64|SODM_PRUPE (Superoxide dismutase [Mn], mitochondrial OS=Prunus persica OX=3760 GN=SOD PE=2 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 5.8e-88 Identity = 159/201 (79.10%), Postives = 173/201 (86.07%), Query Frame = 0
BLAST of MELO3C020487.2 vs. Swiss-Prot
Match: sp|P11796|SODM_NICPL (Superoxide dismutase [Mn], mitochondrial OS=Nicotiana plumbaginifolia OX=4092 GN=SODA PE=1 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 4.9e-87 Identity = 155/201 (77.11%), Postives = 173/201 (86.07%), Query Frame = 0
BLAST of MELO3C020487.2 vs. Swiss-Prot
Match: sp|O81235|SODM1_ARATH (Superoxide dismutase [Mn] 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MSD1 PE=1 SV=2) HSP 1 Score: 309.7 bits (792), Expect = 3.3e-83 Identity = 149/201 (74.13%), Postives = 169/201 (84.08%), Query Frame = 0
BLAST of MELO3C020487.2 vs. Swiss-Prot
Match: sp|O49066|SODM_CAPAN (Superoxide dismutase [Mn], mitochondrial OS=Capsicum annuum OX=4072 GN=SODA PE=2 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 4.3e-83 Identity = 154/201 (76.62%), Postives = 169/201 (84.08%), Query Frame = 0
BLAST of MELO3C020487.2 vs. TrEMBL
Match: tr|A0A0A0LQ39|A0A0A0LQ39_CUCSA (Superoxide dismutase OS=Cucumis sativus OX=3659 GN=Csa_1G025980 PE=3 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 2.5e-112 Identity = 200/207 (96.62%), Postives = 204/207 (98.55%), Query Frame = 0
BLAST of MELO3C020487.2 vs. TrEMBL
Match: tr|A0A1S3C5V1|A0A1S3C5V1_CUCME (Superoxide dismutase OS=Cucumis melo OX=3656 GN=LOC103497020 PE=3 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 1.6e-111 Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0
BLAST of MELO3C020487.2 vs. TrEMBL
Match: tr|A0A1L5JHV8|A0A1L5JHV8_LUFAE (Superoxide dismutase OS=Luffa aegyptiaca OX=3670 PE=2 SV=1) HSP 1 Score: 393.7 bits (1010), Expect = 3.5e-106 Identity = 191/200 (95.50%), Postives = 192/200 (96.00%), Query Frame = 0
BLAST of MELO3C020487.2 vs. TrEMBL
Match: tr|A0A1S3C6G3|A0A1S3C6G3_CUCME (Superoxide dismutase OS=Cucumis melo OX=3656 GN=LOC103497020 PE=3 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 3.7e-95 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of MELO3C020487.2 vs. TrEMBL
Match: tr|H6SWQ3|H6SWQ3_DATGL (Superoxide dismutase OS=Datisca glomerata OX=34297 PE=2 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 1.2e-90 Identity = 162/200 (81.00%), Postives = 179/200 (89.50%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|