MELO3C020480 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020480
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRNA-directed DNA polymerase (Reverse transcriptase)
Locationchr12 : 82528 .. 83239 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCTCAAGCTCAAGGAAGCTATTAGACTCTTTGAATTGTGTTCAAGACAGAAAGTTAATTGGGAAAAATCAGCTCTTAGTGGAGTTAGTATACCCGAGGACATCCTACTGCAAACCGCTGACCGTATGAGCTGCAAGGCAGAAAACTTACCTATTGTATACTTAAGTCTCCCTTTAGGAGGCTATCCTCAGCATCAAGATTTCTGGCAACCGGTCATCGATCGTATTCATAAGAAACTAGATAGATGGAAGCACTTTAACATCCCTAGAGGAGGAAGACAAATTTTGTGCAATGCAGTCTTGACAAGCCTCCAAACTTATTATCTATCCCACAAAATGTGGCAGTCTCCCTTGGAAAAAATCACAAGAAATTTCTTTTGGGAAGGTTCTTCCGGTAGCAAGCTTAACCATCTTGTCAAATGGAATTTGGTTTCTCTTTCCTTAAAGGGTGTGGGTCTTGGCCTTGGAGCCCTCAAAACTCACAATTCTGCCTTGTTAGCAAAATGGGGCTGGAGATTTGCTATGGAAGATTTTTCCTTTGGGAGGAAAATTATTTGTAGCATCCACGGTAAAGAGCCTTTTGATTGGTTCACATTGGAAAAGTTTGGAAATAGTTTAAGGAGCCCATGGTTTAGCATCTCAAAGGTGTGGAGGTCGGTGGAATCTCTGGCATTAACTAAACTTGGAAGGTAGTAGAACAAGTTTTTGG

mRNA sequence

ATGCTTCTCAAGCTCAAGGAAGCTATTAGACTCTTTGAATTGTGTTCAAGACAGAAAGTTAATTGGGAAAAATCAGCTCTTAGTGGAGTTAGTATACCCGAGGACATCCTACTGCAAACCGCTGACCGTATGAGCTGCAAGGCAGAAAACTTACCTATTGTATACTTAAGTCTCCCTTTAGGAGGCTATCCTCAGCATCAAGATTTCTGGCAACCGGTCATCGATCGTATTCATAAGAAACTAGATAGATGGAAGCACTTTAACATCCCTAGAGGAGGAAGACAAATTTTGTGCAATGCAGTCTTGACAAGCCTCCAAACTTATTATCTATCCCACAAAATGTGGCAGTCTCCCTTGGAAAAAATCACAAGAAATTTCTTTTGGGAAGGTTCTTCCGGTAGCAAGCTTAACCATCTTGTCAAATGGAATTTGGTTTCTCTTTCCTTAAAGGGTGTGGGTCTTGGCCTTGGAGCCCTCAAAACTCACAATTCTGCCTTGTTAGCAAAATGGGGCTGGAGATTTGCTATGGAAGATTTTTCCTTTGGGAGGAAAATTATTTGTAGCATCCACGGTAAAGAGCCTTTTGATTGGTTCACATTGGAAAAGTTTGGAAATAGTTTAAGGAGCCCATGGTTTAGCATCTCAAAGGTGTGGAGGTCGGTGGAATCTCTGGCATTAACTAAACTTGGAAGGTAGTAGAACAAGTTTTTGG

Coding sequence (CDS)

ATGCTTCTCAAGCTCAAGGAAGCTATTAGACTCTTTGAATTGTGTTCAAGACAGAAAGTTAATTGGGAAAAATCAGCTCTTAGTGGAGTTAGTATACCCGAGGACATCCTACTGCAAACCGCTGACCGTATGAGCTGCAAGGCAGAAAACTTACCTATTGTATACTTAAGTCTCCCTTTAGGAGGCTATCCTCAGCATCAAGATTTCTGGCAACCGGTCATCGATCGTATTCATAAGAAACTAGATAGATGGAAGCACTTTAACATCCCTAGAGGAGGAAGACAAATTTTGTGCAATGCAGTCTTGACAAGCCTCCAAACTTATTATCTATCCCACAAAATGTGGCAGTCTCCCTTGGAAAAAATCACAAGAAATTTCTTTTGGGAAGGTTCTTCCGGTAGCAAGCTTAACCATCTTGTCAAATGGAATTTGGTTTCTCTTTCCTTAAAGGGTGTGGGTCTTGGCCTTGGAGCCCTCAAAACTCACAATTCTGCCTTGTTAGCAAAATGGGGCTGGAGATTTGCTATGGAAGATTTTTCCTTTGGGAGGAAAATTATTTGTAGCATCCACGGTAAAGAGCCTTTTGATTGGTTCACATTGGAAAAGTTTGGAAATAGTTTAAGGAGCCCATGGTTTAGCATCTCAAAGGTGTGGAGGTCGGTGGAATCTCTGGCATTAACTAAACTTGGAAGGTAG

Protein sequence

MLLKLKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPLGGYPQHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSPLEKITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAMEDFSFGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSISKVWRSVESLALTKLGR*
Homology
[Close]
BLAST of MELO3C020480 vs. Swiss-Prot
Match: RNHX1_ARATH (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-11
Identity = 36/116 (31.03%), Postives = 61/116 (52.59%), Query Frame = 1 

Query: 66  HQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSP----LEK 125
           ++D +  +++R+  ++  W+   +   GR  L  AVL+S+  + +S  +        L++
Sbjct: 9   NKDTFGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQ 68

Query: 126 ITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAME 178
           ++R F W  ++  K  HLVKW+ V    K  GLG+ A K+ N AL++K GWR   E
Sbjct: 69  LSRTFLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQE 124

[Close]
BLAST of MELO3C020480 vs. TrEMBL
Match: M5WKV4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015607mg PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-37
Identity = 89/224 (39.73%), Postives = 130/224 (58.04%), Query Frame = 1 

Query: 3   LKLKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPLGG 62
           L L + ++LF   S  K+N  KS + G++   D L   A    C+    P+VYL LPLGG
Sbjct: 444 LNLLQLLKLFCEVSGMKINKAKSCILGINFSTDALNNMAGSWGCEVGCWPMVYLGLPLGG 503

Query: 63  YPQHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSPL--- 122
            P+  +FW PV+D++ K+L +WK   + +GGR  L  AVL+S+ +YY+S  +++ P+   
Sbjct: 504 NPRALNFWNPVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMS--LFKMPIGVA 563

Query: 123 ---EKITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAM 182
              E++ RNF WEG    K  HLV+W  V+ S +  GLG+G+L+  N AL AKW WRF +
Sbjct: 564 AKVEQLMRNFLWEGLEDGKNCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPL 623

Query: 183 EDFSFGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSISKVWRS 221
           E  S   +II S +G +   W T +    S R+PW  ISK + S
Sbjct: 624 EPNSLWHRIIKSKYGIDSNGWDTKQIDKVSCRNPWREISKGYNS 665

[Close]
BLAST of MELO3C020480 vs. TrEMBL
Match: M5XHS0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020085mg PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-37
Identity = 89/224 (39.73%), Postives = 130/224 (58.04%), Query Frame = 1 

Query: 3   LKLKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPLGG 62
           L L + ++LF   S  K+N  KS + G++   D L   A    C+    P+VYL LPLGG
Sbjct: 680 LNLLQLLKLFCEVSGMKINKAKSCILGINFSTDALNNMAGSWGCEVGCWPMVYLGLPLGG 739

Query: 63  YPQHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSPL--- 122
            P+  +FW PV+D++ K+L +WK   + +GGR  L  AVL+S+ +YY+S  +++ P+   
Sbjct: 740 NPRALNFWNPVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMS--LFKMPIGVA 799

Query: 123 ---EKITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAM 182
              E++ RNF WEG    K  HLV+W  V+ S +  GLG+G+L+  N AL AKW WRF +
Sbjct: 800 AKVEQLMRNFLWEGLEDGKNCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPL 859

Query: 183 EDFSFGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSISKVWRS 221
           E  S   +II S +G +   W T +    S R+PW  ISK + S
Sbjct: 860 EPNSLWHRIIKSKYGIDSNGWDTKQIDKVSCRNPWREISKGYNS 901

[Close]
BLAST of MELO3C020480 vs. TrEMBL
Match: M5VS59_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016504mg PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.8e-37
Identity = 88/224 (39.29%), Postives = 130/224 (58.04%), Query Frame = 1 

Query: 3   LKLKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPLGG 62
           L L + ++LF   S  K+N  KS + G++   + L   A    C+    P+VYL LPLGG
Sbjct: 688 LNLLQLLKLFCDVSGMKINKAKSCILGINFSTEALNNMAGSWGCEVGCWPMVYLGLPLGG 747

Query: 63  YPQHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSPL--- 122
            P+  +FW PV+D++ K+L +WK   + +GGR  L  AVL+S+ +YY+S  +++ P+   
Sbjct: 748 NPRALNFWNPVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMS--LFKMPIGVA 807

Query: 123 ---EKITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAM 182
              E++ RNF WEG    K  HLV+W  V+ S +  GLG+G+L+  N AL AKW WRF +
Sbjct: 808 AKVEQLMRNFLWEGLEEGKNCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPL 867

Query: 183 EDFSFGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSISKVWRS 221
           E  S   +II S +G +   W T +    S R+PW  ISK + S
Sbjct: 868 EPNSLWHRIIKSKYGIDSNGWDTKQIDKVSCRNPWREISKGYNS 909

[Close]
BLAST of MELO3C020480 vs. TrEMBL
Match: M5X4S0_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021750mg PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.0e-36
Identity = 87/224 (38.84%), Postives = 130/224 (58.04%), Query Frame = 1 

Query: 3   LKLKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPLGG 62
           L L + ++LF   S  K+N  KS + G++   ++L   A    C+    P+VYL LPLGG
Sbjct: 437 LNLLQLLKLFCDVSGMKINKAKSCILGINFSTEVLNNMAGSWGCEVGCWPMVYLGLPLGG 496

Query: 63  YPQHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSPL--- 122
            P+  +FW PV++++ K+L +WK   + +GGR  L  AVL+S+ +YY+S  +++ P+   
Sbjct: 497 NPRALNFWNPVMEKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMS--LFKMPIGVA 556

Query: 123 ---EKITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAM 182
              E++ RNF WEG    K  HLV+W  V+ S +  GLG+G+L+  N AL AKW WRF +
Sbjct: 557 AKVEQLMRNFLWEGLEEGKKCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPL 616

Query: 183 EDFSFGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSISKVWRS 221
           E  S   +II S +G +   W T      S R+PW  ISK + S
Sbjct: 617 ETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRNPWREISKGYNS 658

[Close]
BLAST of MELO3C020480 vs. TrEMBL
Match: M5WPQ5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016677mg PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.3e-36
Identity = 86/224 (38.39%), Postives = 130/224 (58.04%), Query Frame = 1 

Query: 3    LKLKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPLGG 62
            L L + ++LF   S  K+N  KS + G++   ++L   A    C+    P++YL LPLGG
Sbjct: 944  LNLLQLLKLFCDVSGMKINKAKSCILGINFSTEVLNNMAGSWGCEVGCWPMIYLGLPLGG 1003

Query: 63   YPQHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSPL--- 122
             P+  +FW PV++++ K+L +WK   + +GGR  L  AVL+S+ +YY+S  +++ P+   
Sbjct: 1004 NPRALNFWNPVMEKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMS--LFKMPIGVA 1063

Query: 123  ---EKITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAM 182
               E++ RNF WEG    K  HLV+W  V+ S +  GLG+G+L+  N AL AKW WRF +
Sbjct: 1064 AKVEQLMRNFLWEGLEEGKKCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPL 1123

Query: 183  EDFSFGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSISKVWRS 221
            E  S   +II S +G +   W T      S R+PW  ISK + S
Sbjct: 1124 ETNSLWHRIIKSKYGIDSNGWDTKRIDKVSCRNPWREISKGYNS 1165

[Close]
BLAST of MELO3C020480 vs. NCBI nr
Match: gi|595831294|ref|XP_007206246.1| (hypothetical protein PRUPE_ppa015607mg, partial [Prunus persica])

HSP 1 Score: 164.5 bits (415), Expect = 2.3e-37
Identity = 89/224 (39.73%), Postives = 130/224 (58.04%), Query Frame = 1 

Query: 3   LKLKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPLGG 62
           L L + ++LF   S  K+N  KS + G++   D L   A    C+    P+VYL LPLGG
Sbjct: 444 LNLLQLLKLFCEVSGMKINKAKSCILGINFSTDALNNMAGSWGCEVGCWPMVYLGLPLGG 503

Query: 63  YPQHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSPL--- 122
            P+  +FW PV+D++ K+L +WK   + +GGR  L  AVL+S+ +YY+S  +++ P+   
Sbjct: 504 NPRALNFWNPVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMS--LFKMPIGVA 563

Query: 123 ---EKITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAM 182
              E++ RNF WEG    K  HLV+W  V+ S +  GLG+G+L+  N AL AKW WRF +
Sbjct: 564 AKVEQLMRNFLWEGLEDGKNCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPL 623

Query: 183 EDFSFGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSISKVWRS 221
           E  S   +II S +G +   W T +    S R+PW  ISK + S
Sbjct: 624 EPNSLWHRIIKSKYGIDSNGWDTKQIDKVSCRNPWREISKGYNS 665

[Close]
BLAST of MELO3C020480 vs. NCBI nr
Match: gi|596230697|ref|XP_007224290.1| (hypothetical protein PRUPE_ppa020085mg, partial [Prunus persica])

HSP 1 Score: 164.5 bits (415), Expect = 2.3e-37
Identity = 89/224 (39.73%), Postives = 130/224 (58.04%), Query Frame = 1 

Query: 3   LKLKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPLGG 62
           L L + ++LF   S  K+N  KS + G++   D L   A    C+    P+VYL LPLGG
Sbjct: 680 LNLLQLLKLFCEVSGMKINKAKSCILGINFSTDALNNMAGSWGCEVGCWPMVYLGLPLGG 739

Query: 63  YPQHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSPL--- 122
            P+  +FW PV+D++ K+L +WK   + +GGR  L  AVL+S+ +YY+S  +++ P+   
Sbjct: 740 NPRALNFWNPVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMS--LFKMPIGVA 799

Query: 123 ---EKITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAM 182
              E++ RNF WEG    K  HLV+W  V+ S +  GLG+G+L+  N AL AKW WRF +
Sbjct: 800 AKVEQLMRNFLWEGLEDGKNCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPL 859

Query: 183 EDFSFGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSISKVWRS 221
           E  S   +II S +G +   W T +    S R+PW  ISK + S
Sbjct: 860 EPNSLWHRIIKSKYGIDSNGWDTKQIDKVSCRNPWREISKGYNS 901

[Close]
BLAST of MELO3C020480 vs. NCBI nr
Match: gi|658030603|ref|XP_008350747.1| (PREDICTED: uncharacterized protein LOC103414113 [Malus domestica])

HSP 1 Score: 162.5 bits (410), Expect = 8.6e-37
Identity = 91/217 (41.94%), Postives = 122/217 (56.22%), Query Frame = 1 

Query: 5    LKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPLGGYP 64
            L E ++LF   S  K+N  K  L+G++   + L + AD   C+  + PI YL LPLGG P
Sbjct: 1252 LLELLKLFCSVSGLKINKAKCYLAGINSDCEKLNRLADSWGCEVGSWPIKYLGLPLGGRP 1311

Query: 65   QHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSP------ 124
            +   FW PV+D++ K+L  WK   + RGGR  L  +VL SL TYY+S  +++ P      
Sbjct: 1312 RALKFWDPVVDKMEKRLQSWKKAFLSRGGRLTLIQSVLGSLPTYYMS--LFKMPCGVIGR 1371

Query: 125  LEKITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAMED 184
            LEK+ + F WEG    K N+LVKW +V  S +  GLG+G L+  N ALLAKW WRF  E 
Sbjct: 1372 LEKLMKGFLWEGVEEGKKNNLVKWEIVIKSKEEGGLGVGNLRNRNEALLAKWLWRFPKEP 1431

Query: 185  FSFGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSIS 216
             S   K+I S +G +   W        S RSPW  IS
Sbjct: 1432 HSLWHKVIRSKYGLQDNGWNAFPPIRGSSRSPWKDIS 1466

[Close]
BLAST of MELO3C020480 vs. NCBI nr
Match: gi|595809689|ref|XP_007202950.1| (hypothetical protein PRUPE_ppa016504mg, partial [Prunus persica])

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 88/224 (39.29%), Postives = 130/224 (58.04%), Query Frame = 1 

Query: 3   LKLKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPLGG 62
           L L + ++LF   S  K+N  KS + G++   + L   A    C+    P+VYL LPLGG
Sbjct: 688 LNLLQLLKLFCDVSGMKINKAKSCILGINFSTEALNNMAGSWGCEVGCWPMVYLGLPLGG 747

Query: 63  YPQHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSPL--- 122
            P+  +FW PV+D++ K+L +WK   + +GGR  L  AVL+S+ +YY+S  +++ P+   
Sbjct: 748 NPRALNFWNPVMDKVEKRLQKWKRACLSKGGRLTLIQAVLSSIPSYYMS--LFKMPIGVA 807

Query: 123 ---EKITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAM 182
              E++ RNF WEG    K  HLV+W  V+ S +  GLG+G+L+  N AL AKW WRF +
Sbjct: 808 AKVEQLMRNFLWEGLEEGKNCHLVRWERVTKSKEEGGLGIGSLRERNEALRAKWLWRFPL 867

Query: 183 EDFSFGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSISKVWRS 221
           E  S   +II S +G +   W T +    S R+PW  ISK + S
Sbjct: 868 EPNSLWHRIIKSKYGIDSNGWDTKQIDKVSCRNPWREISKGYNS 909

[Close]
BLAST of MELO3C020480 vs. NCBI nr
Match: gi|657990185|ref|XP_008387315.1| (PREDICTED: uncharacterized protein LOC103449768 [Malus domestica])

HSP 1 Score: 162.2 bits (409), Expect = 1.1e-36
Identity = 91/217 (41.94%), Postives = 121/217 (55.76%), Query Frame = 1 

Query: 5    LKEAIRLFELCSRQKVNWEKSALSGVSIPEDILLQTADRMSCKAENLPIVYLSLPLGGYP 64
            L E ++LF   S  K+N  K  L G++   + L + AD   C+  + PI YL LPLGG P
Sbjct: 1703 LLELLKLFCSVSGLKINKAKCYLXGINSDCEKLNRLADSWGCEVGSXPIKYLGLPLGGRP 1762

Query: 65   QHQDFWQPVIDRIHKKLDRWKHFNIPRGGRQILCNAVLTSLQTYYLSHKMWQSP------ 124
            +   FW PV+D++ K+L  WK   + RGGR  L  +VL SL TYY+S  +++ P      
Sbjct: 1763 RALKFWDPVVDKMEKRLQSWKKAFLSRGGRLTLIQSVLGSLPTYYMS--LFKMPCGVIGR 1822

Query: 125  LEKITRNFFWEGSSGSKLNHLVKWNLVSLSLKGVGLGLGALKTHNSALLAKWGWRFAMED 184
            LEK+ + F WEG    K N+LVKW +V  S +  GLG+G L+  N ALLAKW WRF  E 
Sbjct: 1823 LEKLMKGFLWEGVEEGKKNNLVKWEIVIKSKEEGGLGVGNLRNRNEALLAKWLWRFPXEP 1882

Query: 185  FSFGRKIICSIHGKEPFDWFTLEKFGNSLRSPWFSIS 216
             S   K+I S +G +   W        S RSPW  IS
Sbjct: 1883 HSLWHKVIRSKYGLQDNGWNAFPPIRGSSRSPWKDIS 1917

The following BLAST results are available for this feature:
BLAST of MELO3C020480 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RNHX1_ARATH4.7e-1131.03Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana GN=At1g65750 P... [more]
BLAST of MELO3C020480 vs. TrEMBL
Match NameE-valueIdentityDescription
M5WKV4_PRUPE1.6e-3739.73Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015607mg PE=4 S... [more]
M5XHS0_PRUPE1.6e-3739.73Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa020085mg PE=4 S... [more]
M5VS59_PRUPE7.8e-3739.29Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016504mg PE=4 S... [more]
M5X4S0_PRUPE1.0e-3638.84Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021750mg PE=4 S... [more]
M5WPQ5_PRUPE1.3e-3638.39Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016677mg PE=4 SV=1[more]
BLAST of MELO3C020480 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|595831294|ref|XP_007206246.1|2.3e-3739.73hypothetical protein PRUPE_ppa015607mg, partial [Prunus persica][more]
gi|596230697|ref|XP_007224290.1|2.3e-3739.73hypothetical protein PRUPE_ppa020085mg, partial [Prunus persica][more]
gi|658030603|ref|XP_008350747.1|8.6e-3741.94PREDICTED: uncharacterized protein LOC103414113 [Malus domestica][more]
gi|595809689|ref|XP_007202950.1|1.1e-3639.29hypothetical protein PRUPE_ppa016504mg, partial [Prunus persica][more]
gi|657990185|ref|XP_008387315.1|1.1e-3641.94PREDICTED: uncharacterized protein LOC103449768 [Malus domestica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020480T1MELO3C020480T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020480Cucurbita pepo (Zucchini)cpemeB479
MELO3C020480Cucurbita pepo (Zucchini)cpemeB494
MELO3C020480Bottle gourd (USVL1VR-Ls)lsimeB174
MELO3C020480Silver-seed gourdcarmeB0522
MELO3C020480Watermelon (97103) v2mewmbB153
MELO3C020480Wax gourdmewgoB161
MELO3C020480Cucumber (Gy14) v1cgymeB158
MELO3C020480Cucurbita maxima (Rimu)cmameB194
MELO3C020480Cucurbita maxima (Rimu)cmameB391
MELO3C020480Cucurbita moschata (Rifu)cmomeB181
MELO3C020480Cucurbita moschata (Rifu)cmomeB382
MELO3C020480Wild cucumber (PI 183967)cpimeB033
MELO3C020480Cucumber (Chinese Long) v2cumeB035
MELO3C020480Watermelon (Charleston Gray)mewcgB149
MELO3C020480Watermelon (97103) v1mewmB146