MELO3C020437.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C020437.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionTranscription factor
Locationchr05 : 8608202 .. 8608522 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAAAGATGTTGTTGAGTTAGGGAGAGAAAGGGAGAGACAAAGAAGACAAGAAATCAGTGCTCTTTATATGCCTTTAAGAATCCTACTTCCTCTTGAATTTATCAAGGTAATTTGTGGGACTGTGCACAGGGGAAGAGATAAACAGAGGGAGAAGAAACGAAAAAAGAAAGATCAAGAACTCACTGGTGACGATATAGGTCTCTTCGTCGTGGGTCTCCATCGCTATGGGTCTCCGTTGTCGAGAAGAAAGGACATAGAGATGAGAAGAATAGGGTTAAGGCTGGGGTTTTCGTTGTGCGTCATTTGTCGTTTGTGA

mRNA sequence

ATGGACAAAGATGTTGTTGAGTTAGGGAGAGAAAGGGAGAGACAAAGAAGACAAGAAATCAGTGCTCTTTATATGCCTTTAAGAATCCTACTTCCTCTTGAATTTATCAAGGTAATTTGTGGGACTGTGCACAGGGGAAGAGATAAACAGAGGGAGAAGAAACGAAAAAAGAAAGATCAAGAACTCACTGGTGACGATATAGGTCTCTTCGTCGTGGGTCTCCATCGCTATGGGTCTCCGTTGTCGAGAAGAAAGGACATAGAGATGAGAAGAATAGGGTTAAGGCTGGGGTTTTCGTTGTGCGTCATTTGTCGTTTGTGA

Coding sequence (CDS)

ATGGACAAAGATGTTGTTGAGTTAGGGAGAGAAAGGGAGAGACAAAGAAGACAAGAAATCAGTGCTCTTTATATGCCTTTAAGAATCCTACTTCCTCTTGAATTTATCAAGGTAATTTGTGGGACTGTGCACAGGGGAAGAGATAAACAGAGGGAGAAGAAACGAAAAAAGAAAGATCAAGAACTCACTGGTGACGATATAGGTCTCTTCGTCGTGGGTCTCCATCGCTATGGGTCTCCGTTGTCGAGAAGAAAGGACATAGAGATGAGAAGAATAGGGTTAAGGCTGGGGTTTTCGTTGTGCGTCATTTGTCGTTTGTGA

Protein sequence

MDKDVVELGRERERQRRQEISALYMPLRILLPLEFIKVICGTVHRGRDKQREKKRKKKDQELTGDDIGLFVVGLHRYGSPLSRRKDIEMRRIGLRLGFSLCVICRL
BLAST of MELO3C020437.2 vs. TAIR10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 40.4 bits (93), Expect = 7.9e-04
Identity = 20/28 (71.43%), Postives = 23/28 (82.14%), Query Frame = 0

Query: 10 RERERQRRQEISALYMPLRILLPLEFIK 38
          RE ERQRRQE+++LY  LR LLPL FIK
Sbjct: 7  RETERQRRQEMASLYASLRSLLPLHFIK 34

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
AT5G51780.17.9e-0471.43basic helix-loop-helix (bHLH) DNA-binding superfamily protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020437.2.1MELO3C020437.2.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None