MELO3C020348 (gene) Melon (DHL92) v3.5.1

NameMELO3C020348
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionAMP-dependent synthetase and ligase family protein
Locationchr5 : 10859679 .. 10860020 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACCGCGAGAAAGGGTAAGGATATGCAGACAAGTGACAATTGGTGTTCCCGCTACTGAGAGTGCTAATAAAGTGCAAGAATCTAATGAGATATCCAACAACCCCTATGACCCTATTAAGCAAAACACAGAAAAAAGCATGTTTGATCGCTTTGGTCAAAGGTTGGTCGATCACTTTATGCCTACACCCTTTATCGTTGATAAGAGATTTAACATTGAAAGATTGAGGGCATTGGGAGCAACAACCTTTGAAGAAACAAAAAACCTTGCTGACACGAAGAAGTGGTTGAATTTGATAGAAAAATATTTTGGGGTGATGGAGTGGCCTGAAGAAAGAAAG

mRNA sequence

ATGGCACCGCGAGAAAGGGTAAGGATATGCAGACAAGTGACAATTGGTGTTCCCGCTACTGAGAGTGCTAATAAAGTGCAAGAATCTAATGAGATATCCAACAACCCCTATGACCCTATTAAGCAAAACACAGAAAAAAGCATGTTTGATCGCTTTGGTCAAAGGTTGGTCGATCACTTTATGCCTACACCCTTTATCGTTGATAAGAGATTTAACATTGAAAGATTGAGGGCATTGGGAGCAACAACCTTTGAAGAAACAAAAAACCTTGCTGACACGAAGAAGTGGTTGAATTTGATAGAAAAATATTTTGGGGTGATGGAGTGGCCTGAAGAAAGAAAG

Coding sequence (CDS)

ATGGCACCGCGAGAAAGGGTAAGGATATGCAGACAAGTGACAATTGGTGTTCCCGCTACTGAGAGTGCTAATAAAGTGCAAGAATCTAATGAGATATCCAACAACCCCTATGACCCTATTAAGCAAAACACAGAAAAAAGCATGTTTGATCGCTTTGGTCAAAGGTTGGTCGATCACTTTATGCCTACACCCTTTATCGTTGATAAGAGATTTAACATTGAAAGATTGAGGGCATTGGGAGCAACAACCTTTGAAGAAACAAAAAACCTTGCTGACACGAAGAAGTGGTTGAATTTGATAGAAAAATATTTTGGGGTGATGGAGTGGCCTGAAGAAAGAAAG

Protein sequence

MAPRERVRICRQVTIGVPATESANKVQESNEISNNPYDPIKQNTEKSMFDRFGQRLVDHFMPTPFIVDKRFNIERLRALGATTFEETKNLADTKKWLNLIEKYFGVMEWPEERK
BLAST of MELO3C020348 vs. TrEMBL
Match: A0A0A0LI31_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G163160 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 5.4e-07
Identity = 29/74 (39.19%), Postives = 48/74 (64.86%), Query Frame = 1

Query: 41  KQNTEKSMFDRFGQRLVDHFMPTPFIVDKRFNIERLRALGATTFEETKNLADTKKWLNLI 100
           ++  E++++DRF QRL++        + K F IER++ALGAT F   +N  + +KW+  +
Sbjct: 17  RREEEEALYDRFAQRLINALAQQ---LKKNFGIERVKALGATEFNGIENHEEAEKWIRTL 76

Query: 101 EKYFGVMEWPEERK 115
           EK F VM+ P+ER+
Sbjct: 77  EKCFRVMQCPKERR 87

BLAST of MELO3C020348 vs. NCBI nr
Match: gi|659068829|ref|XP_008446512.1| (PREDICTED: uncharacterized protein LOC103489219 [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 1.4e-11
Identity = 45/112 (40.18%), Postives = 63/112 (56.25%), Query Frame = 1

Query: 3   PRERVRICRQVTIGVPATESANKVQESNEISNNPYDPIKQNTEKSMFDRFGQRLVDHFMP 62
           PR R R          A E+A + +E +  S+ P+  ++ N E+ + DR  QR V     
Sbjct: 2   PRGRPRKRPVAEASNAAREAAMESEEPDAESSRPH--VEGNVEEQLLDRLAQRFVSRIKS 61

Query: 63  TPFIVDKRFNIERLRALGATTFEETKNLADTKKWLNLIEKYFGVMEWPEERK 115
           T   ++K+F IERL+ALG+TTF  T N A+ + WL LIEK F VM   E+RK
Sbjct: 62  TQSDLEKKFEIERLKALGSTTFARTTNPANAEAWLTLIEKCFRVMRCSEDRK 111

BLAST of MELO3C020348 vs. NCBI nr
Match: gi|659072264|ref|XP_008464580.1| (PREDICTED: uncharacterized protein LOC103502419 [Cucumis melo])

HSP 1 Score: 76.3 bits (186), Expect = 4.0e-11
Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 1

Query: 3   PRERVRICRQVTIGVPATESANKVQESNEISNNPYDPIKQNTEKSMFDRFGQRLVDHFMP 62
           PR R R          A E+A    ES+  S+ P+  ++ N E+ + DR  QRL+     
Sbjct: 21  PRGRPRKHPDAKTSNAAREAAMGSGESDAESSRPH--VEGNMEEQLLDRLAQRLISGIRS 80

Query: 63  TPFIVDKRFNIERLRALGATTFEETKNLADTKKWLNLIEKYFGVMEWPEERK 115
                +K++ IERL+ALGATTF  T N AD + WL LIEK F V   PE+RK
Sbjct: 81  AQSDPEKKYGIERLKALGATTFVGTTNPADAEAWLTLIEKCFRVTRCPEDRK 130

BLAST of MELO3C020348 vs. NCBI nr
Match: gi|700206416|gb|KGN61535.1| (hypothetical protein Csa_2G163160 [Cucumis sativus])

HSP 1 Score: 62.0 bits (149), Expect = 7.8e-07
Identity = 29/74 (39.19%), Postives = 48/74 (64.86%), Query Frame = 1

Query: 41  KQNTEKSMFDRFGQRLVDHFMPTPFIVDKRFNIERLRALGATTFEETKNLADTKKWLNLI 100
           ++  E++++DRF QRL++        + K F IER++ALGAT F   +N  + +KW+  +
Sbjct: 17  RREEEEALYDRFAQRLINALAQQ---LKKNFGIERVKALGATEFNGIENHEEAEKWIRTL 76

Query: 101 EKYFGVMEWPEERK 115
           EK F VM+ P+ER+
Sbjct: 77  EKCFRVMQCPKERR 87

BLAST of MELO3C020348 vs. NCBI nr
Match: gi|659098594|ref|XP_008450217.1| (PREDICTED: uncharacterized protein LOC103491879 [Cucumis melo])

HSP 1 Score: 60.1 bits (144), Expect = 3.0e-06
Identity = 25/46 (54.35%), Postives = 37/46 (80.43%), Query Frame = 1

Query: 69  KRFNIERLRALGATTFEETKNLADTKKWLNLIEKYFGVMEWPEERK 115
           K+F+I+RL+A+   TFE T   ++ K+W+NL+EK FGV+EWP+ERK
Sbjct: 50  KQFSIKRLKAVRVMTFEGTTYPSNAKRWMNLVEKCFGVLEWPKERK 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LI31_CUCSA5.4e-0739.19Uncharacterized protein OS=Cucumis sativus GN=Csa_2G163160 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659068829|ref|XP_008446512.1|1.4e-1140.18PREDICTED: uncharacterized protein LOC103489219 [Cucumis melo][more]
gi|659072264|ref|XP_008464580.1|4.0e-1141.07PREDICTED: uncharacterized protein LOC103502419 [Cucumis melo][more]
gi|700206416|gb|KGN61535.1|7.8e-0739.19hypothetical protein Csa_2G163160 [Cucumis sativus][more]
gi|659098594|ref|XP_008450217.1|3.0e-0654.35PREDICTED: uncharacterized protein LOC103491879 [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020348T1MELO3C020348T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None