MELO3C020339.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C020339.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr06 : 13676963 .. 13677628 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGATCATGAAGGATTGTTGGTTGGAGAAGCTTTGAAGGCACGAAAACGTGCACTGGCTGGATTACAAAAAATCCATGAGGCGGTGGCACGGGAGAGAAAGACGATTGGCCTAGGACCGGTTTGTCCCTCTCTAAACCAATCGGCGCAAGGAATTCGATCGGGTGGCTTACGGTCATGGGATGATGGGTCTGAGATTGGTGGGCAGAATGAAATTGGGCCTACAATAAATGGGCCTTATGAAGAGGTAGTGGATGCTGTTGGGTCGAGAGAGTCTACTAATAAATTGAAGCAGGTTGGACAATCCTCTATTGGGTCAGTCATTGGGCATGAACAAAATAGGTATTCTGATGGAAATTTTTTACCGGCGAGGGATGGAATTGCATCTTCAAGAAGCCCACAGAAATTTGTATTCGAGAAAGATATCTCTTTTGGATCCATTTTGAAAACACAAAGTGAAAATTCTCCTAAGGGAATTGTTATCGAGAATGGTTTTAAGAATAATGGTACTAAATCGACATGGGCTTCGCTTTTTGGGACGTCCAATGAAGGGTCTCTTTCTTATACTCCACCTAAAGCAATTGGGGATAAAGTTGTTGTCGTTCTTCCTGAAGAGGTTATTGCTCAAAGAATTCGGGTGTGGGAAAATTCCTTAGAAGGATAA

mRNA sequence

ATGTCAGATCATGAAGGATTGTTGGTTGGAGAAGCTTTGAAGGCACGAAAACGTGCACTGGCTGGATTACAAAAAATCCATGAGGCGGTGGCACGGGAGAGAAAGACGATTGGCCTAGGACCGGTTTGTCCCTCTCTAAACCAATCGGCGCAAGGAATTCGATCGGGTGGCTTACGGTCATGGGATGATGGGTCTGAGATTGGTGGGCAGAATGAAATTGGGCCTACAATAAATGGGCCTTATGAAGAGGTAGTGGATGCTGTTGGGTCGAGAGAGTCTACTAATAAATTGAAGCAGGTTGGACAATCCTCTATTGGGTCAGTCATTGGGCATGAACAAAATAGGTATTCTGATGGAAATTTTTTACCGGCGAGGGATGGAATTGCATCTTCAAGAAGCCCACAGAAATTTGTATTCGAGAAAGATATCTCTTTTGGATCCATTTTGAAAACACAAAGTGAAAATTCTCCTAAGGGAATTGTTATCGAGAATGGTTTTAAGAATAATGGTACTAAATCGACATGGGCTTCGCTTTTTGGGACGTCCAATGAAGGGTCTCTTTCTTATACTCCACCTAAAGCAATTGGGGATAAAGTTGTTGTCGTTCTTCCTGAAGAGGTTATTGCTCAAAGAATTCGGGTGTGGGAAAATTCCTTAGAAGGATAA

Coding sequence (CDS)

ATGTCAGATCATGAAGGATTGTTGGTTGGAGAAGCTTTGAAGGCACGAAAACGTGCACTGGCTGGATTACAAAAAATCCATGAGGCGGTGGCACGGGAGAGAAAGACGATTGGCCTAGGACCGGTTTGTCCCTCTCTAAACCAATCGGCGCAAGGAATTCGATCGGGTGGCTTACGGTCATGGGATGATGGGTCTGAGATTGGTGGGCAGAATGAAATTGGGCCTACAATAAATGGGCCTTATGAAGAGGTAGTGGATGCTGTTGGGTCGAGAGAGTCTACTAATAAATTGAAGCAGGTTGGACAATCCTCTATTGGGTCAGTCATTGGGCATGAACAAAATAGGTATTCTGATGGAAATTTTTTACCGGCGAGGGATGGAATTGCATCTTCAAGAAGCCCACAGAAATTTGTATTCGAGAAAGATATCTCTTTTGGATCCATTTTGAAAACACAAAGTGAAAATTCTCCTAAGGGAATTGTTATCGAGAATGGTTTTAAGAATAATGGTACTAAATCGACATGGGCTTCGCTTTTTGGGACGTCCAATGAAGGGTCTCTTTCTTATACTCCACCTAAAGCAATTGGGGATAAAGTTGTTGTCGTTCTTCCTGAAGAGGTTATTGCTCAAAGAATTCGGGTGTGGGAAAATTCCTTAGAAGGATAA

Protein sequence

MSDHEGLLVGEALKARKRALAGLQKIHEAVARERKTIGLGPVCPSLNQSAQGIRSGGLRSWDDGSEIGGQNEIGPTINGPYEEVVDAVGSRESTNKLKQVGQSSIGSVIGHEQNRYSDGNFLPARDGIASSRSPQKFVFEKDISFGSILKTQSENSPKGIVIENGFKNNGTKSTWASLFGTSNEGSLSYTPPKAIGDKVVVVLPEEVIAQRIRVWENSLEG
Homology
[Close]
BLAST of MELO3C020339.2 vs. NCBI nr
Match: XP_016903171.1 (PREDICTED: uncharacterized protein LOC103502197 [Cucumis melo] >XP_016903172.1 PREDICTED: uncharacterized protein LOC103502197 [Cucumis melo])

HSP 1 Score: 199.9 bits (507), Expect = 9.0e-48
Identity = 126/223 (56.50%), Postives = 142/223 (63.68%), Query Frame = 0 

Query: 1   MSDHEGLLVGEALKARKRALAGLQKIHEAVARERKTIGLGPVCPSLNQSAQGIRSGGLRS 60
           MSD  G+LVG+A KAR RALA LQKIHEA  RERKT  LG +   LN+ AQ +R  GLR 
Sbjct: 1   MSDSGGVLVGDASKARNRALAELQKIHEAAVRERKTTDLGSIRLPLNRPAQKVRPTGLRP 60

Query: 61  WDDGSEIGGQNEIGPTINGPYEEVVDAVGSRESTNKLKQVGQSSIGSVIGHEQNRYSDGN 120
              GS + GQNEIGP      EE + A         LK  G+SS G +IG +Q R S G 
Sbjct: 61  RKVGSALDGQNEIGPR-----EEGIAAGPRGLEFGGLKPAGESSNGPLIGFDQIRKSGGK 120

Query: 121 FLPARDGIASSRSPQKFVFEKDISFGSILKTQSENSPKGIVIENGFKNN--GTKSTWASL 180
             PA  G+        F  EKDISFGSI K +SEN PK  V+ENG   +  G+ STWASL
Sbjct: 121 DEPASGGLL-------FSTEKDISFGSIWKIRSENVPK--VVENGLHKHTIGSNSTWASL 180

Query: 181 FGTSNEGSLSYTPPKAIGDKVVVVLPEEVIAQRIRVWENSLEG 222
           F TS EGSL YTPPKAIGDK+VVV PEEVI Q IRVWENSL G
Sbjct: 181 FRTSTEGSLPYTPPKAIGDKIVVVPPEEVIVQGIRVWENSLVG 209

[Close]
BLAST of MELO3C020339.2 vs. NCBI nr
Match: XP_008460524.1 (PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo])

HSP 1 Score: 102.8 bits (255), Expect = 1.5e-18
Identity = 95/288 (32.99%), Postives = 114/288 (39.58%), Query Frame = 0 

Query: 1   MSDHEGLLVGEALKARKRALAGLQKIHEAVARERKTIGLGPVCPSLNQSAQGIRSGGLRS 60
           M +   + V +A K RKRALAGLQKIHEA A ERKTI L  V   LN+  Q  RS G  S
Sbjct: 1   MIESGDVTVSDASKTRKRALAGLQKIHEAAACERKTIDLDAVRLPLNRPTQKNRSAGFTS 60

Query: 61  WD-----------------------DGSEIGG---QNEIGPTINGPYEEVVDAVGSREST 120
            +                        GS+ GG   ++  GP I    +     +G   ++
Sbjct: 61  VESAVSGMSXXXXXXXGLQIEGGDVSGSDFGGLKAESFKGPRIENMVKLNTAEIGPPLTS 120

Query: 121 NKLKQVGQSSIGSVIGHEQNRYSDGNFL-------------------------------- 180
              K++G                    L                                
Sbjct: 121 KNQKEIGPKLXXXXXXXXXXXXXXXXXLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 PARDGIASSRSPQ----KFVFEKDISFGSILKTQSENSPKGIVIE-----NGFKNNGTKS 222
             R        PQ      V   DI        Q    P G++       N F  N  KS
Sbjct: 181 SGRKNDGCPNGPQIDAANLVAHDDI--------QPNTDPAGVLKNPTTNVNNFAANVPKS 240

[Close]
BLAST of MELO3C020339.2 vs. NCBI nr
Match: XP_008463187.1 (PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo])

HSP 1 Score: 92.0 bits (227), Expect = 2.6e-15
Identity = 66/165 (40.00%), Postives = 88/165 (53.33%), Query Frame = 0 

Query: 69  GQNEIGPTINGPYEEVVDAVGSRESTNKLKQVG------QSSIG----SVIGHEQNRYSD 128
           G N +GP + GP  E     GS+E+  +   +G      ++ IG    SV G + +  S 
Sbjct: 3   GLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISS 62

Query: 129 GNFLPARDGIASSRSPQKFVFEKDISFGSILKTQSENSPKGIVIENGFKNN--GTKSTWA 188
           G+ +   D   S           ++S G +L  Q+ N     V++NG       +KSTWA
Sbjct: 63  GSRIEFGDFFNSGEDE-----PSNVSSGCVLNNQNANVSN--VVQNGINKQLIDSKSTWA 122

Query: 189 SLFGTSNEGSLSYTPPKAIGDKVVVVLPEEVIAQRIRVWENSLEG 222
           SLFGTS+E SL YT PK IGDK+VV  PEEVI Q I+VWENSL G
Sbjct: 123 SLFGTSSEESLLYTLPKIIGDKIVVTPPEEVIDQGIKVWENSLVG 160

[Close]
BLAST of MELO3C020339.2 vs. TrEMBL
Match: tr|A0A1S4E4L1|A0A1S4E4L1_CUCME (uncharacterized protein LOC103502197 OS=Cucumis melo OX=3656 GN=LOC103502197 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 6.0e-48
Identity = 126/223 (56.50%), Postives = 142/223 (63.68%), Query Frame = 0 

Query: 1   MSDHEGLLVGEALKARKRALAGLQKIHEAVARERKTIGLGPVCPSLNQSAQGIRSGGLRS 60
           MSD  G+LVG+A KAR RALA LQKIHEA  RERKT  LG +   LN+ AQ +R  GLR 
Sbjct: 1   MSDSGGVLVGDASKARNRALAELQKIHEAAVRERKTTDLGSIRLPLNRPAQKVRPTGLRP 60

Query: 61  WDDGSEIGGQNEIGPTINGPYEEVVDAVGSRESTNKLKQVGQSSIGSVIGHEQNRYSDGN 120
              GS + GQNEIGP      EE + A         LK  G+SS G +IG +Q R S G 
Sbjct: 61  RKVGSALDGQNEIGPR-----EEGIAAGPRGLEFGGLKPAGESSNGPLIGFDQIRKSGGK 120

Query: 121 FLPARDGIASSRSPQKFVFEKDISFGSILKTQSENSPKGIVIENGFKNN--GTKSTWASL 180
             PA  G+        F  EKDISFGSI K +SEN PK  V+ENG   +  G+ STWASL
Sbjct: 121 DEPASGGLL-------FSTEKDISFGSIWKIRSENVPK--VVENGLHKHTIGSNSTWASL 180

Query: 181 FGTSNEGSLSYTPPKAIGDKVVVVLPEEVIAQRIRVWENSLEG 222
           F TS EGSL YTPPKAIGDK+VVV PEEVI Q IRVWENSL G
Sbjct: 181 FRTSTEGSLPYTPPKAIGDKIVVVPPEEVIVQGIRVWENSLVG 209

[Close]
BLAST of MELO3C020339.2 vs. TrEMBL
Match: tr|A0A1S3CC83|A0A1S3CC83_CUCME (uncharacterized protein LOC103499323 OS=Cucumis melo OX=3656 GN=LOC103499323 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 9.9e-19
Identity = 95/288 (32.99%), Postives = 114/288 (39.58%), Query Frame = 0 

Query: 1   MSDHEGLLVGEALKARKRALAGLQKIHEAVARERKTIGLGPVCPSLNQSAQGIRSGGLRS 60
           M +   + V +A K RKRALAGLQKIHEA A ERKTI L  V   LN+  Q  RS G  S
Sbjct: 1   MIESGDVTVSDASKTRKRALAGLQKIHEAAACERKTIDLDAVRLPLNRPTQKNRSAGFTS 60

Query: 61  WD-----------------------DGSEIGG---QNEIGPTINGPYEEVVDAVGSREST 120
            +                        GS+ GG   ++  GP I    +     +G   ++
Sbjct: 61  VESAVSGMSXXXXXXXGLQIEGGDVSGSDFGGLKAESFKGPRIENMVKLNTAEIGPPLTS 120

Query: 121 NKLKQVGQSSIGSVIGHEQNRYSDGNFL-------------------------------- 180
              K++G                    L                                
Sbjct: 121 KNQKEIGPKLXXXXXXXXXXXXXXXXXLNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 PARDGIASSRSPQ----KFVFEKDISFGSILKTQSENSPKGIVIE-----NGFKNNGTKS 222
             R        PQ      V   DI        Q    P G++       N F  N  KS
Sbjct: 181 SGRKNDGCPNGPQIDAANLVAHDDI--------QPNTDPAGVLKNPTTNVNNFAANVPKS 240

[Close]
BLAST of MELO3C020339.2 vs. TrEMBL
Match: tr|A0A1S3CJ11|A0A1S3CJ11_CUCME (uncharacterized protein LOC103501395 OS=Cucumis melo OX=3656 GN=LOC103501395 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.7e-15
Identity = 66/165 (40.00%), Postives = 88/165 (53.33%), Query Frame = 0 

Query: 69  GQNEIGPTINGPYEEVVDAVGSRESTNKLKQVG------QSSIG----SVIGHEQNRYSD 128
           G N +GP + GP  E     GS+E+  +   +G      ++ IG    SV G + +  S 
Sbjct: 3   GLNVVGPDLIGPDVESEGKRGSKEAGRRDDGLGSFGPRNETVIGRCGSSVCGQKLDDISS 62

Query: 129 GNFLPARDGIASSRSPQKFVFEKDISFGSILKTQSENSPKGIVIENGFKNN--GTKSTWA 188
           G+ +   D   S           ++S G +L  Q+ N     V++NG       +KSTWA
Sbjct: 63  GSRIEFGDFFNSGEDE-----PSNVSSGCVLNNQNANVSN--VVQNGINKQLIDSKSTWA 122

Query: 189 SLFGTSNEGSLSYTPPKAIGDKVVVVLPEEVIAQRIRVWENSLEG 222
           SLFGTS+E SL YT PK IGDK+VV  PEEVI Q I+VWENSL G
Sbjct: 123 SLFGTSSEESLLYTLPKIIGDKIVVTPPEEVIDQGIKVWENSLVG 160

The following BLAST results are available for this feature:
BLAST of MELO3C020339.2 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016903171.19.0e-4856.50PREDICTED: uncharacterized protein LOC103502197 [Cucumis melo] >XP_016903172.1 P... [more]
XP_008460524.11.5e-1832.99PREDICTED: uncharacterized protein LOC103499323 [Cucumis melo][more]
XP_008463187.12.6e-1540.00PREDICTED: uncharacterized protein LOC103501395 [Cucumis melo][more]
BLAST of MELO3C020339.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C020339.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C020339.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4E4L1|A0A1S4E4L1_CUCME6.0e-4856.50uncharacterized protein LOC103502197 OS=Cucumis melo OX=3656 GN=LOC103502197 PE=... [more]
tr|A0A1S3CC83|A0A1S3CC83_CUCME9.9e-1932.99uncharacterized protein LOC103499323 OS=Cucumis melo OX=3656 GN=LOC103499323 PE=... [more]
tr|A0A1S3CJ11|A0A1S3CJ11_CUCME1.7e-1540.00uncharacterized protein LOC103501395 OS=Cucumis melo OX=3656 GN=LOC103501395 PE=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020339.2.1MELO3C020339.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020339.2Cucumber (Gy14) v2cgybmedB215
MELO3C020339.2Cucumber (Gy14) v1cgymedB144
MELO3C020339.2Cucurbita maxima (Rimu)cmamedB274
MELO3C020339.2Cucurbita maxima (Rimu)cmamedB496
MELO3C020339.2Cucurbita moschata (Rifu)cmomedB261
MELO3C020339.2Cucurbita moschata (Rifu)cmomedB483
MELO3C020339.2Cucurbita pepo (Zucchini)cpemedB630
MELO3C020339.2Cucurbita pepo (Zucchini)cpemedB694
MELO3C020339.2Wild cucumber (PI 183967)cpimedB239
MELO3C020339.2Cucumber (Chinese Long) v2cumedB238
MELO3C020339.2Bottle gourd (USVL1VR-Ls)lsimedB384
MELO3C020339.2Watermelon (Charleston Gray)medwcgB417
MELO3C020339.2Watermelon (97103) v1medwmB448
MELO3C020339.2Silver-seed gourdcarmedB0185
MELO3C020339.2Silver-seed gourdcarmedB0771
MELO3C020339.2Cucumber (Chinese Long) v3cucmedB246
MELO3C020339.2Watermelon (97103) v2medwmbB424
MELO3C020339.2Wax gourdmedwgoB531