MELO3C020329 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020329
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Retrotransposon protein, putative, unclassified
Location	chr6 : 12856039 .. 12856728 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGAGCAAAGTAATGATCAGGTTCAAGCAGTTCGTCAAGATGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTCCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTACTAGAGGACATGACTACATACCCTCCAGGTTTTACTCCTCAACAGTCATCTAGTCCTCGCATAGTGGATAGGACTTATCCTACACAAAATCCTAACACAACCACCCAACAAGCAGTCCATGTGAGTGATCCCATATCTACTCTAATTACGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAGAAGAATGGAATTTCTAGAAGAAAGACTGCGCGCCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCTAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCACTTGTCCAAAAAGTCACCTAGTTATGTACTGTCGAAAAATGTCAGCTTACGCTCATGATGATAAATTGTTGATTTGTTGCTTCCAAGACAGCTTAGTTGGCCCCGCTTCTCGATGGTACATGCAGTTTGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCCGATTCATTCTTCTCTAAAAAACTCTTATAA

mRNA sequence

ATGGATGAGCAAAGTAATGATCAGGTTCAAGCAGTTCGTCAAGATGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTCCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTACTAGAGGACATGACTACATACCCTCCAGGTTTTACTCCTCAACAGTCATCTAGTCCTCGCATAGTGGATAGGACTTATCCTACACAAAATCCTAACACAACCACCCAACAAGCAGTCCATGTGAGTGATCCCATATCTACTCTAATTACGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAGAAGAATGGAATTTCTAGAAGAAAGACTGCGCGCCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCTAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCACTTGTCCAAAAAGTCACCTAGTTATGTACTGTCGAAAAATGTCAGCTTACGCTCATGATGATAAATTGTTGATTTGTTGCTTCCAAGACAGCTTAGTTGGCCCCGCTTCTCGATGGTACATGCAGTTTGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCCGATTCATTCTTCTCTAAAAAACTCTTATAA

Coding sequence (CDS)

ATGGATGAGCAAAGTAATGATCAGGTTCAAGCAGTTCGTCAAGATGTTGAAGGATTGAAAGATCAATTGGCAAAGATCTTGGAACTCCTCACTACTGGAAGAGGAAAGAGTGTTGCAGGGATTTCATCACAAGTGGAAGTAGATCTGAACCAGGTACTAGAGGACATGACTACATACCCTCCAGGTTTTACTCCTCAACAGTCATCTAGTCCTCGCATAGTGGATAGGACTTATCCTACACAAAATCCTAACACAACCACCCAACAAGCAGTCCATGTGAGTGATCCCATATCTACTCTAATTACGGAAGGTGGTAAGAAAATTTCAGAAGAGCAGGGTAGTAGAAGAAGAATGGAATTTCTAGAAGAAAGACTGCGCGCCATTGAAGGTGCAGACATGTACGGGAGTATCGACGCAACACAACTATGTTTGATATCAGATGTGGTGATCCCTCCTAAATTCAAGACTCCAGATTTTGAGAAATACAATGGAACCACTTGTCCAAAAAGTCACCTAGTTATGTACTGTCGAAAAATGTCAGCTTACGCTCATGATGATAAATTGTTGATTTGTTGCTTCCAAGACAGCTTAGTTGGCCCCGCTTCTCGATGGTACATGCAGTTTGATGGTTCACAAGTGCATAGGTGGAAGGATCTTGCCGATTCATTCTTCTCTAAAAAACTCTTATAA

Protein sequence

MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFFSKKLL*

Homology

[Close]

BLAST of MELO3C020329 vs. TrEMBL
Match: A0A061DM48_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_002389 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.0e-48
Identity = 108/248 (43.55%), Postives = 147/248 (59.27%), Query Frame = 1


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           M ++ ++++  + +  E +  QL+KILEL++T +GK VAG S   E            YP
Sbjct: 1   MGDEHSERMDKIEKKQEEIMGQLSKILELISTDKGKKVAGSSGTPEAVQQTETNTDPVYP 60

Query: 61  PGFTP---QQSSSPRIVDRTYPTQN-----PNTTTQQ----AVHVSDPISTLITE----- 120
           PGFTP   + +S P      YP        P T  QQ        SDPIS    +     
Sbjct: 61  PGFTPPPARNASIPMPSMGQYPFFGMPIGPPPTYAQQRPIGGASPSDPISVPDLDDPKEQ 120

Query: 121 -----GGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPD 180
                G  +  +   + ++ +  EERLR +EG  MY S+DA +LCL+SDVVIPPKFK PD
Sbjct: 121 EKLKCGSVESKDNPDTHQKFDLFEERLRMVEGMGMYCSMDAIELCLVSDVVIPPKFKVPD 180

Query: 181 FEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKD 227
           FEKY+GT CP +H+ MYCR+M AYAHDDKLLI CFQDSL G A++WY+Q D +++H WKD
Sbjct: 181 FEKYDGTKCPVTHITMYCRRMVAYAHDDKLLIHCFQDSLTGAAAKWYVQLDRNRIHTWKD 240

[Close]

BLAST of MELO3C020329 vs. TrEMBL
Match: A0A061E8N3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_010930 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.1e-46
Identity = 102/248 (41.13%), Postives = 145/248 (58.47%), Query Frame = 1


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           M ++ ++++  + +  E +  QL+KILEL++T +GK   G S   E            YP
Sbjct: 420 MGDEHSERMDKIEKKQEEIMGQLSKILELISTDKGKKATGSSGTPEDVQQTETNTDPVYP 479

Query: 61  PGFTPQQSSS-----PRIVDRTY---PTQNPNTTTQQ----AVHVSDPISTLITE----- 120
           PGFTP  + +     P +    +   P   P T  QQ        SDPIS    +     
Sbjct: 480 PGFTPPPARNVSIPMPSVGQYPFFRMPIGPPPTYAQQRPIGGASPSDPISVPDLDDPKEQ 539

Query: 121 -----GGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPD 180
                G  +  +   + ++ +  EERLR +EG  MY S+DA +LCL+ DVVIPPKFK PD
Sbjct: 540 EKLKCGSVESKDNPDTHKKFDLFEERLRMVEGMGMYCSMDAIELCLVPDVVIPPKFKVPD 599

Query: 181 FEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKD 227
           FEKY+GT CP +H+ MYCR+M+AYAHDDKLLI CFQDSL G A++WY+Q D +++H WK+
Sbjct: 600 FEKYDGTKCPVTHITMYCRRMAAYAHDDKLLIHCFQDSLTGAAAKWYVQLDRNRIHTWKN 659

[Close]

BLAST of MELO3C020329 vs. TrEMBL
Match: A0A061E6J4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_010507 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-45
Identity = 105/242 (43.39%), Postives = 143/242 (59.09%), Query Frame = 1


Query: 7   DQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTP- 66
           D+++  ++++ G   QL+KILEL++T +GK VAG     E            YPPGFTP 
Sbjct: 2   DKIEKKQEEIMG---QLSKILELISTDKGKKVAGSFGTPEAVQQTETNTDPVYPPGFTPP 61

Query: 67  --QQSSSPRIVDRTYPTQN-----PNTTTQQ----AVHVSDPISTLITE----------G 126
             + +S P      YP        P T  QQ        SDPIS    +          G
Sbjct: 62  PARNASIPMPSMGQYPFFGMPIGPPPTYAQQRPIGGASPSDPISVPDLDDPKEQEKLKCG 121

Query: 127 GKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNG 186
             +  +   + ++ +  EERLR +EG  MY S+DA +LCL+ DVVIPPKFK  DFEKY+G
Sbjct: 122 SVESKDNPDTHQKFDLFEERLRMVEGMGMYCSMDAIELCLVPDVVIPPKFKVSDFEKYDG 181

Query: 187 TTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFF 227
           T CP +H+ MYCR+M+AYAHDDKLLI CFQDSL G A++WY+Q D +++H WKDLA +F 
Sbjct: 182 TKCPVTHITMYCRRMAAYAHDDKLLIHCFQDSLTGAAAKWYVQLDRNRIHTWKDLARAFV 240

[Close]

BLAST of MELO3C020329 vs. TrEMBL
Match: A0A061FW77_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_012470 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 5.9e-45
Identity = 103/227 (45.37%), Postives = 135/227 (59.47%), Query Frame = 1


Query: 22  QLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYPPGFTP---QQSSSPRIVDRTY 81
           QL+KILEL++T +GK  A  S   E            YPPGFTP   + +S P      Y
Sbjct: 3   QLSKILELISTDKGKKAARSSGTPEDVQQTETNTDPVYPPGFTPPPARNASIPMPSVGQY 62

Query: 82  PTQN-----PNTTTQQ----AVHVSDPISTLITE----------GGKKISEEQGSRRRME 141
           P        P+T  QQ        SDPIS    +          G  +  +   + ++ +
Sbjct: 63  PFFGMPIGPPSTYAQQRPIGGASPSDPISVPDLDDPKEQEKLKCGSVESKDNPDTHQKFD 122

Query: 142 FLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKM 201
             EERLR +EG  MY S+DA +LCL+ DVVIPPKFK PDFEKY+GT CP +H+ MYCR+M
Sbjct: 123 LFEERLRMVEGMGMYCSMDAIELCLVPDVVIPPKFKVPDFEKYDGTKCPVTHITMYCRRM 182

Query: 202 SAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFFSK 227
           +AYAHDDKLLI CFQDSL G A++WY+Q D +++H WKDLA +F ++
Sbjct: 183 AAYAHDDKLLIHCFQDSLTGAAAKWYVQLDRNRIHTWKDLARAFVAQ 229

[Close]

BLAST of MELO3C020329 vs. TrEMBL
Match: A0A061E733_THECC (Gag-pro-like protein OS=Theobroma cacao GN=TCM_010324 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-41
Identity = 96/255 (37.65%), Postives = 149/255 (58.43%), Query Frame = 1


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTT-GRGKSV----AGISSQVEVDLNQVLED 60
           M E+  +++  + +  E +++QLAK++EL+ +  +GK      A   +    D     ED
Sbjct: 484 MGEEQRERMDRMERAQEEMREQLAKMMELMMSLSKGKRAIKEPAPSENPPAQDSGNQRED 543

Query: 61  MTTYPPGFTPQQSSS-----PRIVDRTYPTQNPNTTTQ---------QAVHVSDPIST-- 120
              YPPGFTP  + +     P+++   Y    P    Q           ++ ++PI+   
Sbjct: 544 -PPYPPGFTPPHAQTSQRVHPQVIPPVYYNAPPPLGHQPIQGQFGPYSGINPAEPINVPD 603

Query: 121 --------LITEGGKKISEEQGSRRRMEFLEERLRAIEGADMYGSIDATQLCLISDVVIP 180
                    + +   +  E +  +++ + LEERLRAIEG D +G++DAT+LCL+ DV+IP
Sbjct: 604 LDDPKEQEKLRKDSSQTGENEKDQKKYDLLEERLRAIEGVDRFGTMDATELCLVPDVLIP 663

Query: 181 PKFKTPDFEKYNGTTCPKSHLVMYCRKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGS 227
            KFK P+FEKY+GT CP +H+ MYCRKM+A +HDDKLLI  FQDSL G A+RWY+Q D +
Sbjct: 664 AKFKVPEFEKYDGTKCPMAHITMYCRKMAAQSHDDKLLIHFFQDSLTGSAARWYVQLDRN 723

[Close]

BLAST of MELO3C020329 vs. NCBI nr
Match: gi|659114599|ref|XP_008457136.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496882 [Cucumis melo])

HSP 1 Score: 455.7 bits (1171), Expect = 4.9e-125
Identity = 224/226 (99.12%), Postives = 224/226 (99.12%), Query Frame = 1


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP
Sbjct: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120
           PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF
Sbjct: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120

Query: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180
           LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS
Sbjct: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180

Query: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFFSK 227
           AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSF  K
Sbjct: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFLRK 226

[Close]

BLAST of MELO3C020329 vs. NCBI nr
Match: gi|659130442|ref|XP_008465174.1| (PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo])

HSP 1 Score: 394.0 bits (1011), Expect = 1.7e-106
Identity = 196/226 (86.73%), Postives = 205/226 (90.71%), Query Frame = 1


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAVRQDVEGLKDQLAKILEL TTGR KSVAGISSQVEVDLNQVLEDM  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELFTTGRRKSVAGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120
            GFTPQ+SSSPR+   TYPTQNPN  TQQ  HVSDP+ST IT+ GKKISEEQ SR+R+EF
Sbjct: 61  IGFTPQRSSSPRM---TYPTQNPNPITQQTDHVSDPMSTPITKSGKKISEEQSSRKRLEF 120

Query: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180
           LEERLR IEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC+KMS
Sbjct: 121 LEERLRVIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCQKMS 180

Query: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFFSK 227
           AYAHDDKLLI CFQDSLVGP SRWYMQ DGSQVHRWKDLADSF  +
Sbjct: 181 AYAHDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQ 223

[Close]

BLAST of MELO3C020329 vs. NCBI nr
Match: gi|659093710|ref|XP_008447676.1| (PREDICTED: uncharacterized protein LOC103490085 [Cucumis melo])

HSP 1 Score: 391.0 bits (1003), Expect = 1.5e-105
Identity = 195/226 (86.28%), Postives = 205/226 (90.71%), Query Frame = 1


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAVRQDVEGLKDQLAKILELLT GRGKSV GISSQVEVDLNQVLEDM  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTIGRGKSVTGISSQVEVDLNQVLEDMPAYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQNPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRRRMEF 120
           PGFTPQ+SSSPR+   TY TQNPN  TQQ  HVSDP+ST ITE GKKI EEQGSR+R+EF
Sbjct: 61  PGFTPQRSSSPRM---TYSTQNPNPITQQENHVSDPMSTPITESGKKILEEQGSRKRLEF 120

Query: 121 LEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYCRKMS 180
           +EERLRAIEGADMYGSIDATQLCLIS VVIPPKFKTP+FEKYNGTTCPKSHLVMYCRKMS
Sbjct: 121 VEERLRAIEGADMYGSIDATQLCLISYVVIPPKFKTPNFEKYNGTTCPKSHLVMYCRKMS 180

Query: 181 AYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFFSK 227
           AYA+DDKLLI CFQDSLVGP SRWYMQ DGSQVHRWKDLADSF  +
Sbjct: 181 AYAYDDKLLIHCFQDSLVGPTSRWYMQLDGSQVHRWKDLADSFLKQ 223

[Close]

BLAST of MELO3C020329 vs. NCBI nr
Match: gi|659102853|ref|XP_008452348.1| (PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 9.5e-105
Identity = 196/230 (85.22%), Postives = 204/230 (88.70%), Query Frame = 1


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAG SSQVEVDLNQVLED+  YP
Sbjct: 1   MDEQTNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGTSSQVEVDLNQVLEDILAYP 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRR 120
           P FTPQ+ SSPR+VDRTYPT     NPNTTTQQA HVSD IST IT+ GKKISEEQGSR+
Sbjct: 61  PSFTPQRPSSPRMVDRTYPTSFPAPNPNTTTQQAAHVSDLISTPITKSGKKISEEQGSRK 120

Query: 121 RMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180
           R+EFLEERL  IEG DMY SIDATQLCLISDVVIP KFK PDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLCTIEGIDMYESIDATQLCLISDVVIPLKFKIPDFEKYNGTTCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFFSK 227
           RKMS YAHDDKLLI  FQDSLVGPASRWYMQFDGSQVHRW DLADSF  +
Sbjct: 181 RKMSTYAHDDKLLIHRFQDSLVGPASRWYMQFDGSQVHRWNDLADSFLKQ 230

[Close]

BLAST of MELO3C020329 vs. NCBI nr
Match: gi|659122237|ref|XP_008461036.1| (PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo])

HSP 1 Score: 353.6 bits (906), Expect = 2.6e-94
Identity = 181/230 (78.70%), Postives = 192/230 (83.48%), Query Frame = 1


Query: 1   MDEQSNDQVQAVRQDVEGLKDQLAKILELLTTGRGKSVAGISSQVEVDLNQVLEDMTTYP 60
           MDEQ+NDQVQAV QDVEGL+DQL KILELLTTGRGK+VAG SSQVEVDLNQVLEDM+ Y 
Sbjct: 1   MDEQTNDQVQAVCQDVEGLEDQLKKILELLTTGRGKNVAGTSSQVEVDLNQVLEDMSAYL 60

Query: 61  PGFTPQQSSSPRIVDRTYPTQ----NPNTTTQQAVHVSDPISTLITEGGKKISEEQGSRR 120
           PGFTPQ+SSSPR+VDRTYPT     NPNTTTQQAV+                    GSRR
Sbjct: 61  PGFTPQRSSSPRMVDRTYPTSFPMPNPNTTTQQAVY--------------------GSRR 120

Query: 121 RMEFLEERLRAIEGADMYGSIDATQLCLISDVVIPPKFKTPDFEKYNGTTCPKSHLVMYC 180
           R+EFLEERLRAIEGADMYGSIDATQLCLISDVVI PKFKTPDFEKYNGTTCPKSHLVMYC
Sbjct: 121 RLEFLEERLRAIEGADMYGSIDATQLCLISDVVISPKFKTPDFEKYNGTTCPKSHLVMYC 180

Query: 181 RKMSAYAHDDKLLICCFQDSLVGPASRWYMQFDGSQVHRWKDLADSFFSK 227
           RK+S YAHDDKLLI CFQDSLVG  SRWYMQ DGSQVHRWKDLA+SF  +
Sbjct: 181 RKISVYAHDDKLLIHCFQDSLVGSTSRWYMQLDGSQVHRWKDLANSFLKQ 210

The following BLAST results are available for this feature:

BLAST of MELO3C020329 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061DM48_THECC	2.0e-48	43.55	Gag-pro-like protein OS=Theobroma cacao GN=TCM_002389 PE=4 SV=1	[more]
A0A061E8N3_THECC	3.1e-46	41.13	Uncharacterized protein OS=Theobroma cacao GN=TCM_010930 PE=4 SV=1	[more]
A0A061E6J4_THECC	1.6e-45	43.39	Uncharacterized protein OS=Theobroma cacao GN=TCM_010507 PE=4 SV=1	[more]
A0A061FW77_THECC	5.9e-45	45.37	Gag-pro-like protein OS=Theobroma cacao GN=TCM_012470 PE=4 SV=1	[more]
A0A061E733_THECC	1.8e-41	37.65	Gag-pro-like protein OS=Theobroma cacao GN=TCM_010324 PE=4 SV=1	[more]

BLAST of MELO3C020329 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114599\|ref\|XP_008457136.1\|	4.9e-125	99.12	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103496882 [Cucumis me...	[more]
gi\|659130442\|ref\|XP_008465174.1\|	1.7e-106	86.73	PREDICTED: uncharacterized protein LOC103502838 [Cucumis melo]	[more]
gi\|659093710\|ref\|XP_008447676.1\|	1.5e-105	86.28	PREDICTED: uncharacterized protein LOC103490085 [Cucumis melo]	[more]
gi\|659102853\|ref\|XP_008452348.1\|	9.5e-105	85.22	PREDICTED: uncharacterized protein LOC103493407 [Cucumis melo]	[more]
gi\|659122237\|ref\|XP_008461036.1\|	2.6e-94	78.70	PREDICTED: uncharacterized protein LOC103499741 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020329T1	MELO3C020329T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 9..29 scor

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020329	Silver-seed gourd	carmeB0181
MELO3C020329	Silver-seed gourd	carmeB0756
MELO3C020329	Cucumber (Chinese Long) v3	cucmeB247
MELO3C020329	Watermelon (97103) v2	mewmbB434
MELO3C020329	Wax gourd	mewgoB530
MELO3C020329	Cucumber (Gy14) v1	cgymeB144
MELO3C020329	Cucurbita maxima (Rimu)	cmameB243
MELO3C020329	Cucurbita maxima (Rimu)	cmameB431
MELO3C020329	Cucurbita moschata (Rifu)	cmomeB231
MELO3C020329	Cucurbita moschata (Rifu)	cmomeB421
MELO3C020329	Wild cucumber (PI 183967)	cpimeB241
MELO3C020329	Cucumber (Chinese Long) v2	cumeB251
MELO3C020329	Watermelon (Charleston Gray)	mewcgB427
MELO3C020329	Watermelon (97103) v1	mewmB461
MELO3C020329	Cucurbita pepo (Zucchini)	cpemeB529
MELO3C020329	Cucurbita pepo (Zucchini)	cpemeB586
MELO3C020329	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C020329	Cucumber (Gy14) v2	cgybmeB210