BLAST of MELO3C020310 vs. Swiss-Prot
Match:
LORF2_MOUSE (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2)
HSP 1 Score: 98.6 bits (244), Expect = 8.0e-20
Identity = 66/213 (30.99%), Postives = 104/213 (48.83%), Query Frame = 1
Query: 5 KAPGPDGFSVGFFKGVNA-------------------------TTITLIPK-LRGAERME 64
K+PGPDGFS F++ TITLIPK + ++E
Sbjct: 476 KSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLIPKPQKDPTKIE 535
Query: 65 EFRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGGYHL 124
FRPIS N+ K ++KILA+RI + + I +Q F+PG NI ++ +
Sbjct: 536 NFRPISLMNIDAKILNKILANRIQEHIKAIIHPDQVGFIPGMQGWFNIRKSINVIHYINK 595
Query: 125 NFGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMINGSLE 184
K + +D +KA+D + F+ +L G +++ I+A + P+ +I +NG
Sbjct: 596 LKDKNHMIISLDAEKAFDKIQHPFMIKVLERSGIQGPYLNMIKAIYSKPVANIKVNGEKL 655
Query: 185 GFFHGRKGVRQGDPLSPFLFVMVMEVLSRMLNK 192
+ G RQG PLSP+LF +V+EVL+R + +
Sbjct: 656 EAIPLKSGTRQGCPLSPYLFNIVLEVLARAIRQ 688
BLAST of MELO3C020310 vs. Swiss-Prot
Match:
LIN1_NYCCO (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1)
HSP 1 Score: 96.7 bits (239), Expect = 3.0e-19
Identity = 70/208 (33.65%), Postives = 99/208 (47.60%), Query Frame = 1
Query: 5 KAPGPDGFSVGFFK--------------------GVNATT-----ITLIPKL-RGAERME 64
K+PGPDGF+ F++ G+ T ITLIPK + R E
Sbjct: 468 KSPGPDGFTSEFYQTFKEELVPILLNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRKE 527
Query: 65 EFRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGGYHL 124
+RPIS N+ K ++KIL +RI + I +Q F+PG NI ++ +
Sbjct: 528 NYRPISLMNIDAKILNKILTNRIQQHIKKIIHHDQVGFIPGSQGWFNIRKSINVIQHINK 587
Query: 125 NFGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMINGSLE 184
K L +D +KA+D++ F+ L IG F+ I A + P +I++NG
Sbjct: 588 LKNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKL 647
Query: 185 GFFHGRKGVRQGDPLSPFLFVMVMEVLS 187
F R G RQG PLSP LF +VMEVL+
Sbjct: 648 KSFPLRSGTRQGCPLSPLLFNIVMEVLA 675
BLAST of MELO3C020310 vs. Swiss-Prot
Match:
LORF2_HUMAN (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1)
HSP 1 Score: 95.9 bits (237), Expect = 5.2e-19
Identity = 68/215 (31.63%), Postives = 102/215 (47.44%), Query Frame = 1
Query: 5 KAPGPDGFSVGFFKGVNA-------------------------TTITLIPKL-RGAERME 64
K+PGPDGF+ F++ +I LIPK R + E
Sbjct: 469 KSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKE 528
Query: 65 EFRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGGYHL 124
FRPIS N+ K ++KILA+RI + I +Q F+PG NI ++ H+
Sbjct: 529 NFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVI--QHI 588
Query: 125 NFGKPR--YTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMINGS 184
N K + + +D +KA+D + F+ L +G ++ IRA P +I++NG
Sbjct: 589 NRAKDKNHVIISIDAEKAFDKIQQPFMLKTLNKLGIDGMYLKIIRAIYDKPTANIILNGQ 648
Query: 185 LEGFFHGRKGVRQGDPLSPFLFVMVMEVLSRMLNK 192
F + G RQG PLSP LF +V+EVL+R + +
Sbjct: 649 KLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQ 681
BLAST of MELO3C020310 vs. Swiss-Prot
Match:
YTX2_XENLA (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 60/216 (27.78%), Postives = 98/216 (45.37%), Query Frame = 1
Query: 1 MDSGKAPGPDGFSVGFFK-------------------------GVNATTITLIPKLRGAE 60
M K+PG DG ++ FF+ ++L+PK
Sbjct: 461 MPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKKGDLR 520
Query: 61 RMEEFRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGG 120
++ +RP+S + YK ++K ++ R+ L I +QS +PGR+I DN+ L ++L+
Sbjct: 521 LIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPDQSYTVPGRTIFDNVFLIRDLLH- 580
Query: 121 YHLNFGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMING 180
+ G L +D +KA+D V+ +L G L A +FV +++ S + IN
Sbjct: 581 FARRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAECLVKINW 640
Query: 181 SLEGFFHGRKGVRQGDPLSPFLFVMVMEVLSRMLNK 192
SL +GVRQG PLS L+ + +E +L K
Sbjct: 641 SLTAPLAFGRGVRQGCPLSGQLYSLAIEPFLCLLRK 675
BLAST of MELO3C020310 vs. Swiss-Prot
Match:
POLR_DROME (Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster GN=pol PE=3 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 6.5e-14
Identity = 55/165 (33.33%), Postives = 84/165 (50.91%), Query Frame = 1
Query: 28 IPKLRGAERMEEFRPISCCNVIYKCISKILADRI---CVWLPSFISSNQSAFMPGRSIID 87
IPK A+R ++FRPIS +V+ + ++ ILA R+ W P Q F+P D
Sbjct: 403 IPKTVTAKRPQDFRPISVPSVLVRQLNAILATRLNSSINWDP-----RQRGFLPTDGCAD 462
Query: 88 NILLCQELVGGYHLNFGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACI 147
N + ++ H +F + Y +D+ KA+DS++ ++ L A G P FV +++
Sbjct: 463 NATIVDLVLRHSHKHF-RSCYIANLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTY 522
Query: 148 TSPMFSIMINGSLEGFFHGRKGVRQGDPLSPFLFVMVMEVLSRML 190
S+ +G F +GV+QGDPLSP LF +VM+ L R L
Sbjct: 523 EGGGTSLNGDGWSSEEFVPARGVKQGDPLSPILFNLVMDRLLRTL 561
BLAST of MELO3C020310 vs. TrEMBL
Match:
Q7DLW4_ARATH (Non-ltr retrotransposon reverse transcriptase-like protein OS=Arabidopsis thaliana PE=4 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 2.8e-48
Identity = 102/210 (48.57%), Postives = 131/210 (62.38%), Query Frame = 1
Query: 5 KAPGPDGFSVGFFKGV-------------------------NATTITLIPKLRGAERMEE 64
KA GPDG+S FFKGV NATT+ LIPK+ + +M +
Sbjct: 464 KASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTD 523
Query: 65 FRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGGYHLN 124
FRPISC N +YK I+K+L R+ L IS +QSAF+PGR + +N+LL E+V GY+
Sbjct: 524 FRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTK 583
Query: 125 FGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMINGSLEG 184
R LKVDL+KA+DSV WDF+ A+ P KFV WI CI++P FS+M+NGS G
Sbjct: 584 NISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSG 643
Query: 185 FFHGRKGVRQGDPLSPFLFVMVMEVLSRML 190
FF KG+RQGDPLSP+LFV+ MEV S +L
Sbjct: 644 FFKSNKGLRQGDPLSPYLFVLAMEVFSSLL 673
BLAST of MELO3C020310 vs. TrEMBL
Match:
Q9LRU8_ARATH (Non-LTR retroelement reverse transcriptase-like protein OS=Arabidopsis thaliana PE=4 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 2.8e-48
Identity = 102/210 (48.57%), Postives = 131/210 (62.38%), Query Frame = 1
Query: 5 KAPGPDGFSVGFFKGV-------------------------NATTITLIPKLRGAERMEE 64
KA GPDG+S FFKGV NATT+ LIPK+ + +M +
Sbjct: 464 KASGPDGYSSEFFKGVWFVVGPEVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTD 523
Query: 65 FRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGGYHLN 124
FRPISC N +YK I+K+L R+ L IS +QSAF+PGR + +N+LL E+V GY+
Sbjct: 524 FRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTK 583
Query: 125 FGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMINGSLEG 184
R LKVDL+KA+DSV WDF+ A+ P KFV WI CI++P FS+M+NGS G
Sbjct: 584 NISSRGMLKVDLRKAFDSVRWDFIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSG 643
Query: 185 FFHGRKGVRQGDPLSPFLFVMVMEVLSRML 190
FF KG+RQGDPLSP+LFV+ MEV S +L
Sbjct: 644 FFKSNKGLRQGDPLSPYLFVLAMEVFSSLL 673
BLAST of MELO3C020310 vs. TrEMBL
Match:
Q9FL83_ARATH (Non-LTR retroelement reverse transcriptase-like protein OS=Arabidopsis thaliana PE=4 SV=1)
HSP 1 Score: 199.1 bits (505), Expect = 4.8e-48
Identity = 98/216 (45.37%), Postives = 137/216 (63.43%), Query Frame = 1
Query: 1 MDSGKAPGPDGFSVGFFK-------------------------GVNATTITLIPKLRGAE 60
M S K+PGPDG++ FFK G+N+T + LIPK A
Sbjct: 465 MPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAR 524
Query: 61 RMEEFRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGG 120
M+++RPISCCNV+YK ISKI+A+R+ + LP FI+ NQSAF+ R +I+N+LL ELV
Sbjct: 525 EMKDYRPISCCNVLYKVISKIIANRLKLVLPKFIAGNQSAFVKDRLLIENLLLATELVKD 584
Query: 121 YHLNFGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMING 180
YH + R +K+D+ KA+DSV W FL + +G P +F+ WI CIT+ FS+ +NG
Sbjct: 585 YHKDTISTRCAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNG 644
Query: 181 SLEGFFHGRKGVRQGDPLSPFLFVMVMEVLSRMLNK 192
L G+F +G+RQG LSP+LFV+ M+VLS+ML+K
Sbjct: 645 ELAGYFQSSRGLRQGCALSPYLFVICMDVLSKMLDK 680
BLAST of MELO3C020310 vs. TrEMBL
Match:
Q9M1N9_ARATH (Putative uncharacterized protein T18B22.50 OS=Arabidopsis thaliana GN=T18B22.50 PE=4 SV=1)
HSP 1 Score: 199.1 bits (505), Expect = 4.8e-48
Identity = 100/217 (46.08%), Postives = 139/217 (64.06%), Query Frame = 1
Query: 1 MDSGKAPGPDGFSVGFFK-------------------------GVNATTITLIPKLRGAE 60
M + K+PGPDGF+ FFK GVN+T + LIPK ++
Sbjct: 18 MPNDKSPGPDGFTSEFFKESWEILGPEFILAIQSFFALGFLPKGVNSTILALIPKKLESK 77
Query: 61 RMEEFRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGG 120
M+++RPISCCNV+YK ISKILA+R+ + LP FI+ NQS+F+ R +I+N+LL +LV
Sbjct: 78 EMKDYRPISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKD 137
Query: 121 YHLNFGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMING 180
YH + R +K+D+ KA DSV W FL L A+ P F+ WIR CIT+P FS+ +NG
Sbjct: 138 YHKDSISERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNG 197
Query: 181 SLEGFFHGRKGVRQGDPLSPFLFVMVMEVLSRMLNKL 193
L GFF +G+RQG LSP+LFV+ M+VLS++L+K+
Sbjct: 198 ELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLDKV 234
BLAST of MELO3C020310 vs. TrEMBL
Match:
O65598_ARATH (Putative uncharacterized protein AT4g26360 OS=Arabidopsis thaliana GN=M3E9.210 PE=4 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 8.2e-48
Identity = 99/201 (49.25%), Postives = 131/201 (65.17%), Query Frame = 1
Query: 1 MDSGKAPGPDGFSV-----------GFFKGVNATTITLIPKLRGAERMEEFRPISCCNVI 60
+ S KA GPDGF V K NATTI LIPK A +FRPISC N +
Sbjct: 451 LPSNKACGPDGFPVTAAVREFFISGNLLKQWNATTIVLIPKFPNASCTSDFRPISCMNTL 510
Query: 61 YKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGGYHLNFGKPRYTLKV 120
YK I+++L DR+ L IS +QSAF+PGR + +N+LL E+V GY+ R LKV
Sbjct: 511 YKVIARLLTDRLQKLLSCVISPSQSAFLPGRLLAENVLLATEMVHGYNWRNISLRGMLKV 570
Query: 121 DLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMINGSLEGFFHGRKGVRQ 180
DL+KA+DSV W+F+ L+A+G P KF++WI CI++P F++ +NG GFF KG+RQ
Sbjct: 571 DLRKAFDSVRWEFIIAALLALGVPTKFINWIHQCISTPTFTVSVNGCCGGFFKSAKGLRQ 630
Query: 181 GDPLSPFLFVMVMEVLSRMLN 191
GDPLSP+LFV+ MEV S++LN
Sbjct: 631 GDPLSPYLFVLAMEVFSKLLN 651
BLAST of MELO3C020310 vs. TAIR10
Match:
AT1G43760.1 (AT1G43760.1 DNAse I-like superfamily protein)
HSP 1 Score: 58.5 bits (140), Expect = 5.2e-09
Identity = 31/79 (39.24%), Postives = 37/79 (46.84%), Query Frame = 1
Query: 1 MDSGKAPGPDGFSVGFF-------------------------KGVNATTITLIPKLRGAE 55
M KAPGPD F+ FF K NAT ITLIPK+ G +
Sbjct: 543 MPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVD 602
BLAST of MELO3C020310 vs. TAIR10
Match:
AT4G20520.1 (AT4G20520.1 RNA binding;RNA-directed DNA polymerases)
HSP 1 Score: 55.1 bits (131), Expect = 5.7e-08
Identity = 30/78 (38.46%), Postives = 42/78 (53.85%), Query Frame = 1
Query: 57 LADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGGYHLNFG-KPRYTLKVDLQKAY 116
+ +R+ + + I Q++F+PGR DNI+ QE V G K LK+DL+KAY
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKGVKGWMLLKLDLEKAY 60
Query: 117 DSVNWDFLFGLLIAIGTP 134
D + WD+L LI+ G P
Sbjct: 61 DRIRWDYLEDTLISAGFP 78
BLAST of MELO3C020310 vs. NCBI nr
Match:
gi|659114595|ref|XP_008457134.1| (PREDICTED: uncharacterized protein LOC103496880 [Cucumis melo])
HSP 1 Score: 274.6 bits (701), Expect = 1.3e-70
Identity = 136/147 (92.52%), Postives = 136/147 (92.52%), Query Frame = 1
Query: 1 MDSGKAPGPDGFSVGFFKG-----------VNATTITLIPKLRGAERMEEFRPISCCNVI 60
MDSGKAPGPDGFSVGFFKG VNATTITLIPKLRGAERMEEFRPISCCNVI
Sbjct: 751 MDSGKAPGPDGFSVGFFKGAWSMTCYLQLGVNATTITLIPKLRGAERMEEFRPISCCNVI 810
Query: 61 YKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGGYHLNFGKPRYTLKV 120
YKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGGYHLNFGKPRYTLKV
Sbjct: 811 YKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGGYHLNFGKPRYTLKV 870
Query: 121 DLQKAYDSVNWDFLFGLLIAIGTPLKF 137
DLQKAYDSVNWDFLFGLLIAIGTPLKF
Sbjct: 871 DLQKAYDSVNWDFLFGLLIAIGTPLKF 897
BLAST of MELO3C020310 vs. NCBI nr
Match:
gi|659102432|ref|XP_008452126.1| (PREDICTED: uncharacterized protein LOC103493225 [Cucumis melo])
HSP 1 Score: 268.9 bits (686), Expect = 7.1e-69
Identity = 146/218 (66.97%), Postives = 154/218 (70.64%), Query Frame = 1
Query: 1 MDSGKAPGPDGFSVGFFKG-------------------------VNATTITLIPKLRGAE 60
MDSGKAPGPDGFSVGFFKG VNAT ITLIPK GAE
Sbjct: 338 MDSGKAPGPDGFSVGFFKGAWSVIGEDFCDAVLHFFETYYLPVGVNATAITLIPKHNGAE 397
Query: 61 RMEEFRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGG 120
R+E+FRPISCCNV+YKCISKILADR+ VWLPSFISSNQSAF+ GRSII+NILLCQELVGG
Sbjct: 398 RLEDFRPISCCNVLYKCISKILADRLRVWLPSFISSNQSAFILGRSIIENILLCQELVGG 457
Query: 121 YHLNFGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMING 180
YHLN GKPR TLKVDLQKAYDSVNWDFLFGL I+I TPLK
Sbjct: 458 YHLNSGKPRCTLKVDLQKAYDSVNWDFLFGLQISISTPLK-------------------- 517
Query: 181 SLEGFFHGRKGVRQGDPLSPFLFVMVMEVLSRMLNKLP 194
KGVRQGDPLS FLFVMVMEVLSRMLNK+P
Sbjct: 518 ---------KGVRQGDPLSLFLFVMVMEVLSRMLNKIP 526
BLAST of MELO3C020310 vs. NCBI nr
Match:
gi|923926168|ref|XP_013732055.1| (PREDICTED: uncharacterized protein LOC106435696 [Brassica napus])
HSP 1 Score: 208.4 bits (529), Expect = 1.1e-50
Identity = 105/216 (48.61%), Postives = 137/216 (63.43%), Query Frame = 1
Query: 1 MDSGKAPGPDGFSVGFFK-------------------------GVNATTITLIPKLRGAE 60
M S KAPGPDGF F++ GVNAT +TLIPK A
Sbjct: 807 MPSSKAPGPDGFPADFYRASWDIIKKDFIIAVQSFFMFGFLPRGVNATILTLIPKHGDAR 866
Query: 61 RMEEFRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGG 120
++++RPISCCN++YK ISKILA+R+ V LP I NQ AF+ GR +++N+LL ELV
Sbjct: 867 EIKDYRPISCCNILYKVISKILANRLKVLLPELIEPNQCAFVKGRLLLENVLLATELVKN 926
Query: 121 YHLNFGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMING 180
YH +PR LK+D+ KA+DSVNW F+ L A+G P F+ WI C++S FS+ +NG
Sbjct: 927 YHKESIQPRSVLKLDISKAFDSVNWVFITSTLRALGIPEMFIHWIHTCLSSATFSVSVNG 986
Query: 181 SLEGFFHGRKGVRQGDPLSPFLFVMVMEVLSRMLNK 192
LEGFF +G+RQG LSP+LFV+ + VLSRMLNK
Sbjct: 987 ELEGFFGSERGLRQGCALSPYLFVIAVNVLSRMLNK 1022
BLAST of MELO3C020310 vs. NCBI nr
Match:
gi|923748039|ref|XP_013673349.1| (PREDICTED: uncharacterized protein LOC106377630 [Brassica napus])
HSP 1 Score: 208.0 bits (528), Expect = 1.5e-50
Identity = 104/216 (48.15%), Postives = 138/216 (63.89%), Query Frame = 1
Query: 1 MDSGKAPGPDGFSVGFFK-------------------------GVNATTITLIPKLRGAE 60
M S KAPGPDGF F++ GVNAT +TLIPK A
Sbjct: 807 MPSSKAPGPDGFPADFYRASWDIIKKDFITAVQSFFMFGFLPRGVNATILTLIPKHGDAR 866
Query: 61 RMEEFRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGG 120
++++RPISCCN++YK ISKILA+R+ V LP I NQ AF+ GR +++N+LL ELV
Sbjct: 867 EIKDYRPISCCNILYKVISKILANRLKVLLPELIEPNQCAFVKGRLLLENVLLATELVKN 926
Query: 121 YHLNFGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMING 180
YH +PR LK+D+ KA+DSVNW+F+ L A+G P F+ WI C+++ FS+ +NG
Sbjct: 927 YHKESIQPRSVLKLDISKAFDSVNWNFIMITLRALGIPEMFIHWIHTCLSTATFSVSVNG 986
Query: 181 SLEGFFHGRKGVRQGDPLSPFLFVMVMEVLSRMLNK 192
LEGFF +G+RQG LSP+LFV+ + VLSRMLNK
Sbjct: 987 ELEGFFGSERGLRQGCALSPYLFVIAVNVLSRMLNK 1022
BLAST of MELO3C020310 vs. NCBI nr
Match:
gi|923696384|ref|XP_013658277.1| (PREDICTED: uncharacterized protein LOC106363011 [Brassica napus])
HSP 1 Score: 206.8 bits (525), Expect = 3.3e-50
Identity = 103/216 (47.69%), Postives = 140/216 (64.81%), Query Frame = 1
Query: 1 MDSGKAPGPDGFSVGFF-------------------------KGVNATTITLIPKLRGAE 60
M S KAPGPDG+ F+ KGVNAT + LIPK++GAE
Sbjct: 801 MPSNKAPGPDGYPAEFYRSAWPIIIHDFTIAVQSFFMFGFLPKGVNATLLALIPKIQGAE 860
Query: 61 RMEEFRPISCCNVIYKCISKILADRICVWLPSFISSNQSAFMPGRSIIDNILLCQELVGG 120
+++F PISCCN++YK ISKILA+R+ V+LP I NQ AF+ GR +++N+LL ELV
Sbjct: 861 TLKDFCPISCCNILYKVISKILANRLKVFLPELIEPNQCAFIKGRLLLENVLLATELVKN 920
Query: 121 YHLNFGKPRYTLKVDLQKAYDSVNWDFLFGLLIAIGTPLKFVSWIRACITSPMFSIMING 180
YH + R TLK+D+ KA+DSVNW F+ L A+ P +FV WI C+++ FS+ +NG
Sbjct: 921 YHKDSIGARSTLKLDISKAFDSVNWSFILDTLRAMNIPEQFVHWIHVCLSTAAFSVSLNG 980
Query: 181 SLEGFFHGRKGVRQGDPLSPFLFVMVMEVLSRMLNK 192
LEGFF +G+RQG LSP+LFV+ + VLSR+LN+
Sbjct: 981 ELEGFFPSTRGLRQGCALSPYLFVIAINVLSRLLNR 1016
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| LORF2_MOUSE | 8.0e-20 | 30.99 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus GN=Pol PE=1 SV=2 | [more] |
| LIN1_NYCCO | 3.0e-19 | 33.65 | LINE-1 reverse transcriptase homolog OS=Nycticebus coucang PE=3 SV=1 | [more] |
| LORF2_HUMAN | 5.2e-19 | 31.63 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens PE=1 SV=1 | [more] |
| YTX2_XENLA | 2.0e-15 | 27.78 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis PE=3 SV=1 | [more] |
| POLR_DROME | 6.5e-14 | 33.33 | Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Q7DLW4_ARATH | 2.8e-48 | 48.57 | Non-ltr retrotransposon reverse transcriptase-like protein OS=Arabidopsis thalia... | [more] |
| Q9LRU8_ARATH | 2.8e-48 | 48.57 | Non-LTR retroelement reverse transcriptase-like protein OS=Arabidopsis thaliana ... | [more] |
| Q9FL83_ARATH | 4.8e-48 | 45.37 | Non-LTR retroelement reverse transcriptase-like protein OS=Arabidopsis thaliana ... | [more] |
| Q9M1N9_ARATH | 4.8e-48 | 46.08 | Putative uncharacterized protein T18B22.50 OS=Arabidopsis thaliana GN=T18B22.50 ... | [more] |
| O65598_ARATH | 8.2e-48 | 49.25 | Putative uncharacterized protein AT4g26360 OS=Arabidopsis thaliana GN=M3E9.210 P... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT1G43760.1 | 5.2e-09 | 39.24 | DNAse I-like superfamily protein | [more] |
| AT4G20520.1 | 5.7e-08 | 38.46 | RNA binding;RNA-directed DNA polymerases | [more] |
