MELO3C020290 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020290
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Heat-stable enterotoxin receptor
Location	chr6 : 13740895 .. 13741128 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTCGGAGTCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCAAGGTGGTGGGGCCGACCCTGGGGTTTTTGGCTTTCGCTGTGGCGGCGGTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTTTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCGGCTACCGTCGTATACCCGTCGGTGTCTAATGCGATTCCGATTTGA

mRNA sequence

ATGGCTGTCGGAGTCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCAAGGTGGTGGGGCCGACCCTGGGGTTTTTGGCTTTCGCTGTGGCGGCGGTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTTTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCGGCTACCGTCGTATACCCGTCGGTGTCTAATGCGATTCCGATTTGA

Coding sequence (CDS)

ATGGCTGTCGGAGTCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCAAGGTGGTGGGGCCGACCCTGGGGTTTTTGGCTTTCGCTGTGGCGGCGGTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTTTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCGGCTACCGTCGTATACCCGTCGGTGTCTAATGCGATTCCGATTTGA

Protein sequence

MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAIPI*

Homology

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BLAST of MELO3C020290 vs. TrEMBL
Match: A0A0A0LA45_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346910 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 9.0e-38
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 1


Query: 1  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          M VG+GVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM
Sbjct: 1  MGVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60

Query: 61 AHPATVVYPSVSNAIPI 78
          AHPATVVYPSVSNA+PI
Sbjct: 61 AHPATVVYPSVSNAVPI 77

[Close]

BLAST of MELO3C020290 vs. TrEMBL
Match: A0A059BUM2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02822 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.0e-33
Identity = 66/77 (85.71%), Postives = 73/77 (94.81%), Query Frame = 1


Query: 1  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          MA+G+G+PIC++CGT SNPCRCKVVGPT+GFLAFA AAVVEWPVGALV+CFRH KGRRIM
Sbjct: 1  MALGIGIPICVQCGTTSNPCRCKVVGPTVGFLAFAAAAVVEWPVGALVYCFRHGKGRRIM 60

Query: 61 AHPATVVYPSVSNAIPI 78
          AHPATVVYPSV NAIPI
Sbjct: 61 AHPATVVYPSVINAIPI 77

[Close]

BLAST of MELO3C020290 vs. TrEMBL
Match: D7TSS2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01580 PE=4 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 3.9e-33
Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = 1


Query: 1  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          M  GV +P+C++CGTHSNPCRCKVVGPTLGFLAFAVAA+VEWPVGALV+CFRH KGRRIM
Sbjct: 1  MTAGVRIPLCVQCGTHSNPCRCKVVGPTLGFLAFAVAAIVEWPVGALVYCFRHMKGRRIM 60

Query: 61 AHPATVVYPSVSNAIPI 78
          AHPA VVYPSVSNA PI
Sbjct: 61 AHPAAVVYPSVSNAFPI 77

[Close]

BLAST of MELO3C020290 vs. TrEMBL
Match: I3SB72_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 6.7e-33
Identity = 64/75 (85.33%), Postives = 72/75 (96.00%), Query Frame = 1


Query: 3  VGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAH 62
          VG+G+PIC++CGTHSNPCRCKVVGPT+GFLAFA AAVVEWPVGALV+CFRH KGR+IMAH
Sbjct: 2  VGIGIPICVQCGTHSNPCRCKVVGPTVGFLAFAAAAVVEWPVGALVYCFRHVKGRKIMAH 61

Query: 63 PATVVYPSVSNAIPI 78
          PATVVYPSV+ AIPI
Sbjct: 62 PATVVYPSVNKAIPI 76

[Close]

BLAST of MELO3C020290 vs. TrEMBL
Match: V4ST33_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013249mg PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 3.3e-32
Identity = 62/77 (80.52%), Postives = 71/77 (92.21%), Query Frame = 1


Query: 1  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          M  G+G+PIC++CGT SNPCRCKVVGPT+GFLAFA AA+VEWP+GALVFCF+H KGRRIM
Sbjct: 1  MTAGIGIPICVQCGTRSNPCRCKVVGPTVGFLAFAAAAIVEWPLGALVFCFKHMKGRRIM 60

Query: 61 AHPATVVYPSVSNAIPI 78
          AHPATVVYP V+NAIPI
Sbjct: 61 AHPATVVYPRVTNAIPI 77

[Close]

BLAST of MELO3C020290 vs. TAIR10
Match: AT3G03341.1 (AT3G03341.1 unknown protein)

HSP 1 Score: 119.8 bits (299), Expect = 7.6e-28
Identity = 51/71 (71.83%), Postives = 57/71 (80.28%), Query Frame = 1


Query: 7  VPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATV 66
          +PIC++CGT  NPCRCKVVGPTLG +AF  A +VEWPVGALV+ F+H KGRRIM HPAT 
Sbjct: 2  IPICVQCGTGGNPCRCKVVGPTLGLVAFVAAGIVEWPVGALVYIFKHAKGRRIMGHPATH 61

Query: 67 VYPSVSNAIPI 78
          VYP VS +IPI
Sbjct: 62 VYPKVSRSIPI 72

[Close]

BLAST of MELO3C020290 vs. NCBI nr
Match: gi|659114483|ref|XP_008457074.1| (PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo])

HSP 1 Score: 166.0 bits (419), Expect = 2.6e-38
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 1


Query: 1  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM
Sbjct: 1  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60

Query: 61 AHPATVVYPSVSNAIPI 78
          AHPATVVYPSVSNAIPI
Sbjct: 61 AHPATVVYPSVSNAIPI 77

[Close]

BLAST of MELO3C020290 vs. NCBI nr
Match: gi|449466446|ref|XP_004150937.1| (PREDICTED: uncharacterized protein LOC101215398 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 1.3e-37
Identity = 74/77 (96.10%), Postives = 76/77 (98.70%), Query Frame = 1


Query: 1  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          M VG+GVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM
Sbjct: 1  MGVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60

Query: 61 AHPATVVYPSVSNAIPI 78
          AHPATVVYPSVSNA+PI
Sbjct: 61 AHPATVVYPSVSNAVPI 77

[Close]

BLAST of MELO3C020290 vs. NCBI nr
Match: gi|702374339|ref|XP_010062235.1| (PREDICTED: uncharacterized protein LOC104449694 [Eucalyptus grandis])

HSP 1 Score: 148.7 bits (374), Expect = 4.3e-33
Identity = 66/77 (85.71%), Postives = 73/77 (94.81%), Query Frame = 1


Query: 1  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          MA+G+G+PIC++CGT SNPCRCKVVGPT+GFLAFA AAVVEWPVGALV+CFRH KGRRIM
Sbjct: 1  MALGIGIPICVQCGTTSNPCRCKVVGPTVGFLAFAAAAVVEWPVGALVYCFRHGKGRRIM 60

Query: 61 AHPATVVYPSVSNAIPI 78
          AHPATVVYPSV NAIPI
Sbjct: 61 AHPATVVYPSVINAIPI 77

[Close]

BLAST of MELO3C020290 vs. NCBI nr
Match: gi|225453138|ref|XP_002273470.1| (PREDICTED: uncharacterized protein LOC100246645 [Vitis vinifera])

HSP 1 Score: 148.3 bits (373), Expect = 5.6e-33
Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = 1


Query: 1  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          M  GV +P+C++CGTHSNPCRCKVVGPTLGFLAFAVAA+VEWPVGALV+CFRH KGRRIM
Sbjct: 1  MTAGVRIPLCVQCGTHSNPCRCKVVGPTLGFLAFAVAAIVEWPVGALVYCFRHMKGRRIM 60

Query: 61 AHPATVVYPSVSNAIPI 78
          AHPA VVYPSVSNA PI
Sbjct: 61 AHPAAVVYPSVSNAFPI 77

[Close]

BLAST of MELO3C020290 vs. NCBI nr
Match: gi|769814026|ref|XP_011622765.1| (PREDICTED: uncharacterized protein LOC105420519 [Amborella trichopoda])

HSP 1 Score: 147.5 bits (371), Expect = 9.6e-33
Identity = 67/77 (87.01%), Postives = 72/77 (93.51%), Query Frame = 1


Query: 1   MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
           +AVGVGVPIC++CGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGA+V+ FRH  GRRIM
Sbjct: 37  IAVGVGVPICVQCGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGAVVYLFRHMTGRRIM 96

Query: 61  AHPATVVYPSVSNAIPI 78
           AHP TVVYPSVSNAIPI
Sbjct: 97  AHPVTVVYPSVSNAIPI 113

The following BLAST results are available for this feature:

BLAST of MELO3C020290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA45_CUCSA	9.0e-38	96.10	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346910 PE=4 SV=1	[more]
A0A059BUM2_EUCGR	3.0e-33	85.71	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F02822 PE=4 SV=1	[more]
D7TSS2_VITVI	3.9e-33	84.42	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0006g01580 PE=4 SV=...	[more]
I3SB72_LOTJA	6.7e-33	85.33	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
V4ST33_9ROSI	3.3e-32	80.52	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013249mg PE=4 SV=1	[more]

BLAST of MELO3C020290 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03341.1	7.6e-28	71.83	unknown protein	[more]

BLAST of MELO3C020290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114483\|ref\|XP_008457074.1\|	2.6e-38	100.00	PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo]	[more]
gi\|449466446\|ref\|XP_004150937.1\|	1.3e-37	96.10	PREDICTED: uncharacterized protein LOC101215398 [Cucumis sativus]	[more]
gi\|702374339\|ref\|XP_010062235.1\|	4.3e-33	85.71	PREDICTED: uncharacterized protein LOC104449694 [Eucalyptus grandis]	[more]
gi\|225453138\|ref\|XP_002273470.1\|	5.6e-33	84.42	PREDICTED: uncharacterized protein LOC100246645 [Vitis vinifera]	[more]
gi\|769814026\|ref\|XP_011622765.1\|	9.6e-33	87.01	PREDICTED: uncharacterized protein LOC105420519 [Amborella trichopoda]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020290T1	MELO3C020290T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34673	FAMILY NOT NAMED	coord: 1..77 score: 3.5
None	No IPR available	PANTHER	PTHR34673:SF1	SUBFAMILY NOT NAMED	coord: 1..77 score: 3.5

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020290	Silver-seed gourd	carmeB0181
MELO3C020290	Silver-seed gourd	carmeB0756
MELO3C020290	Cucumber (Chinese Long) v3	cucmeB249
MELO3C020290	Watermelon (97103) v2	mewmbB434
MELO3C020290	Wax gourd	mewgoB530
MELO3C020290	Cucumber (Gy14) v1	cgymeB343
MELO3C020290	Cucurbita maxima (Rimu)	cmameB243
MELO3C020290	Cucurbita maxima (Rimu)	cmameB431
MELO3C020290	Cucurbita moschata (Rifu)	cmomeB231
MELO3C020290	Cucurbita moschata (Rifu)	cmomeB421
MELO3C020290	Wild cucumber (PI 183967)	cpimeB241
MELO3C020290	Wild cucumber (PI 183967)	cpimeB243
MELO3C020290	Cucumber (Chinese Long) v2	cumeB246
MELO3C020290	Watermelon (Charleston Gray)	mewcgB427
MELO3C020290	Watermelon (97103) v1	mewmB461
MELO3C020290	Cucurbita pepo (Zucchini)	cpemeB529
MELO3C020290	Cucurbita pepo (Zucchini)	cpemeB586
MELO3C020290	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C020290	Cucumber (Gy14) v2	cgybmeB212