MELO3C020284 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020284
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Pro-apoptotic serine protease nma111-like protein
Location	chr6 : 13779247 .. 13780894 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGTTGTTAGAGCGTTGACATTTCTTCAGATGGGTAGAGATTGTTACGATCATAAATGGGAAGCAGTTTCCATTCCCCGTGGTACGCTTCAGGTTTGTTGTTGAAATAATTCTTATAAAATTTAAATACAAAGATTTTCATCCTCTGCCTACTTTTCTTTTTTTAAAAGGAAACAATCTCACTTATTAATATCCAATGAGACAATTGCTCATAGTACAAGAGGATTATACAAGAGCAAACATCGCAAACAAGGATTAGGAGGTGCACCCGGACATAGTTGACACCCCATTAGCACCCTCATCATATCCAACAAAATAAAGGACCAAACAATTATTAAATAAAGTCCAATTGGAGCTTAACACAGCCAATACAAACCAATAAGGAACATCTTAAAGTTTGCTTAGAAGCTTTTTTAGCTTTCCTTTCTCAAGAAATTAGTGGTTTTGATGGCTTGGTGGTGTTGTATTGCACGTATCAAATTGTTTTTCTGAAAAATAAAATACATCACTATTAAATACTACCATTTCGGTAGTTTCCACCGTCCAAACTTCTTCCACTGAAGGCTCAACTGACTGCAAATTGGTCTAGAGTTGGGCTCTGGAGGAGGCTTCTGCAATCCATGGTTGGCTGAACTTTGTGAAGCCCACAAATGTCTATTATCTAATATCATATTATCATGAACTCGGATAGGGTGTGTTAACACCATTTGATGTAATTTATCACCAATTCAACCCAAAAACTTAAGCTGGTGGGTGAAGGTAAATTTAGTTATGTATCAGAACACTCCCTCTCCCTTGTGGGCTTGAAATACTTGAAAGTCCAACAGAAGCCCAACGGGTGGAAATGAATTTTAATTGGAGAGGAAACAAGGAAGGAGCTTGAACCCAGAACATCCTGAAGCAACCTGCTCTAAAACCATCTTAAATCACCAATTCAACCCGAAAGCTTAAGCTAGTGGGTAAAAGTAAATTTAATTATATAACACATCAGTATATAATAAATAAACTGAAATCTGCTTGGTTACAACTTACAAGAGAGCTAATATTATACCAGTTTAGGCGAAATAACAGCTATCTAATTACAAGTGGCTAGAGAAGCCTATAACGGCCAAATATCCACCTACTAGCTTTTAGTGCTAGTTTGTAATTTTGTATCAGTTAAAGAGAAAGGCCCAATAAATTCCTTCGCCAGGTATATCCTTGAAAGGATAGGTACAAATCCTTCGACCGAGAATCATTTCAATATCAGCAAAGTTGTTTTTATCATACTCCCCACTCCCCGGTACATAACTCATGTATCTGAAATCCTTCTCCAAGAACGGGGCACGCCGTACTCTATGCCTGATTTTAATCAAAACATATAATGACTTATTCTCAGTATTGTATGCTTTTGACTATGATTTTATTGTGGGGTGTAACTTGACTCTCACTGGGGATCTTGGTGTGACCTTATTATATTAATAGCTGCTATGCAGGTGAAAGGCATTGATTTTACATTATGTTCACAAATTCACATTTTTAAATTATTAATCGTCATCAGCAGCGTCATCTTCATTTATTTTCCCTCTTACAGGCAACCTTTCTACACAAAGGATTTGATGAGATACGTAGGCTTGGCCTCCGAAGTGAAACAGAGCAGGTTTAA

mRNA sequence

ATGCAGGTTGTTAGAGCGTTGACATTTCTTCAGATGGGTAGAGATTGTTACGATCATAAATGGGAAGCAGTTTCCATTCCCCGTGGTACGCTTCAGGCAACCTTTCTACACAAAGGATTTGATGAGATACGTAGGCTTGGCCTCCGAAGTGAAACAGAGCAGGTTTAA

Coding sequence (CDS)

ATGCAGGTTGTTAGAGCGTTGACATTTCTTCAGATGGGTAGAGATTGTTACGATCATAAATGGGAAGCAGTTTCCATTCCCCGTGGTACGCTTCAGGCAACCTTTCTACACAAAGGATTTGATGAGATACGTAGGCTTGGCCTCCGAAGTGAAACAGAGCAGGTTTAA

Protein sequence

MQVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV*

Homology

[Close]

BLAST of MELO3C020284 vs. Swiss-Prot
Match: DEGP7_ARATH (Protease Do-like 7 OS=Arabidopsis thaliana GN=DEGP7 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.2e-14
Identity = 41/54 (75.93%), Postives = 42/54 (77.78%), Query Frame = 1


Query: 2   QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
           +VVRAL+FLQ   D    K +AV IPRGTLQ TFLHKGFDEIRRLGLRSETEQV
Sbjct: 238 RVVRALSFLQKSIDSRTDKPKAVHIPRGTLQMTFLHKGFDEIRRLGLRSETEQV 291

[Close]

BLAST of MELO3C020284 vs. TrEMBL
Match: A0A0A0LCP3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346390 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.5e-21
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 1


Query: 2   QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
           +VVRAL FLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQ+
Sbjct: 93  RVVRALKFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQM 146

[Close]

BLAST of MELO3C020284 vs. TrEMBL
Match: A0A103YGY4_CYNCS (PDZ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_012745 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 2.4e-16
Identity = 44/54 (81.48%), Postives = 48/54 (88.89%), Query Frame = 1


Query: 2   QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
           +VVRALTFLQ GRD +  KWEAV+IPRGTLQATFLHKGFDE RRLGLRSE EQ+
Sbjct: 302 RVVRALTFLQKGRDSFQDKWEAVTIPRGTLQATFLHKGFDETRRLGLRSEIEQL 355

[Close]

BLAST of MELO3C020284 vs. TrEMBL
Match: A0A061EGI2_THECC (DegP protease 7 isoform 2 OS=Theobroma cacao GN=TCM_019222 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.1e-16
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 1


Query: 2   QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
           +VVRAL FLQ G D Y  KWEAVSIPRGTLQATFLHKGFDEIRRLGL+SETEQ+
Sbjct: 136 RVVRALKFLQKGGDSYMSKWEAVSIPRGTLQATFLHKGFDEIRRLGLQSETEQM 189

[Close]

BLAST of MELO3C020284 vs. TrEMBL
Match: A0A061EG47_THECC (DegP protease 7 isoform 1 OS=Theobroma cacao GN=TCM_019222 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 4.1e-16
Identity = 45/54 (83.33%), Postives = 48/54 (88.89%), Query Frame = 1


Query: 2   QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
           +VVRAL FLQ G D Y  KWEAVSIPRGTLQATFLHKGFDEIRRLGL+SETEQ+
Sbjct: 238 RVVRALKFLQKGGDSYMSKWEAVSIPRGTLQATFLHKGFDEIRRLGLQSETEQM 291

[Close]

BLAST of MELO3C020284 vs. TrEMBL
Match: A0A0D2QSV5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G064500 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 7.0e-16
Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = 1


Query: 2   QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
           +VVRAL FLQ G D Y  KWEA+SIPRGTLQATF+HKGFDEIRRLGL+SETEQ+
Sbjct: 238 RVVRALKFLQKGGDSYMSKWEAISIPRGTLQATFVHKGFDEIRRLGLQSETEQI 291

[Close]

BLAST of MELO3C020284 vs. TAIR10
Match: AT3G03380.1 (AT3G03380.1 DegP protease 7)

HSP 1 Score: 78.2 bits (191), Expect = 1.8e-15
Identity = 41/54 (75.93%), Postives = 42/54 (77.78%), Query Frame = 1


Query: 2   QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
           +VVRAL+FLQ   D    K +AV IPRGTLQ TFLHKGFDEIRRLGLRSETEQV
Sbjct: 238 RVVRALSFLQKSIDSRTDKPKAVHIPRGTLQMTFLHKGFDEIRRLGLRSETEQV 291

[Close]

BLAST of MELO3C020284 vs. NCBI nr
Match: gi|659114480|ref|XP_008457072.1| (PREDICTED: protease Do-like 7 isoform X3 [Cucumis melo])

HSP 1 Score: 112.5 bits (280), Expect = 2.5e-22
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 1


Query: 2  QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
          QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQ+
Sbjct: 7  QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQM 60

[Close]

BLAST of MELO3C020284 vs. NCBI nr
Match: gi|659114478|ref|XP_008457071.1| (PREDICTED: protease Do-like 7 isoform X2 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 7.2e-22
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 1


Query: 2   QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
           +VVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQ+
Sbjct: 239 RVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQM 292

[Close]

BLAST of MELO3C020284 vs. NCBI nr
Match: gi|659114476|ref|XP_008457070.1| (PREDICTED: protease Do-like 7 isoform X1 [Cucumis melo])

HSP 1 Score: 110.9 bits (276), Expect = 7.2e-22
Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 1


Query: 2   QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
           +VVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQ+
Sbjct: 239 RVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQM 292

[Close]

BLAST of MELO3C020284 vs. NCBI nr
Match: gi|449464156|ref|XP_004149795.1| (PREDICTED: protease Do-like 7 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 3.6e-21
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 1


Query: 2   QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
           +VVRAL FLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQ+
Sbjct: 239 RVVRALKFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQM 292

[Close]

BLAST of MELO3C020284 vs. NCBI nr
Match: gi|700202708|gb|KGN57841.1| (hypothetical protein Csa_3G346390 [Cucumis sativus])

HSP 1 Score: 108.6 bits (270), Expect = 3.6e-21
Identity = 51/54 (94.44%), Postives = 53/54 (98.15%), Query Frame = 1


Query: 2   QVVRALTFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQV 56
           +VVRAL FLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQ+
Sbjct: 93  RVVRALKFLQMGRDCYDHKWEAVSIPRGTLQATFLHKGFDEIRRLGLRSETEQM 146

The following BLAST results are available for this feature:

BLAST of MELO3C020284 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DEGP7_ARATH	3.2e-14	75.93	Protease Do-like 7 OS=Arabidopsis thaliana GN=DEGP7 PE=2 SV=1	[more]

BLAST of MELO3C020284 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCP3_CUCSA	2.5e-21	94.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G346390 PE=4 SV=1	[more]
A0A103YGY4_CYNCS	2.4e-16	81.48	PDZ domain-containing protein OS=Cynara cardunculus var. scolymus GN=Ccrd_012745...	[more]
A0A061EGI2_THECC	4.1e-16	83.33	DegP protease 7 isoform 2 OS=Theobroma cacao GN=TCM_019222 PE=4 SV=1	[more]
A0A061EG47_THECC	4.1e-16	83.33	DegP protease 7 isoform 1 OS=Theobroma cacao GN=TCM_019222 PE=4 SV=1	[more]
A0A0D2QSV5_GOSRA	7.0e-16	79.63	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G064500 PE=4 SV=1	[more]

BLAST of MELO3C020284 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G03380.1	1.8e-15	75.93	DegP protease 7	[more]

BLAST of MELO3C020284 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114480\|ref\|XP_008457072.1\|	2.5e-22	98.15	PREDICTED: protease Do-like 7 isoform X3 [Cucumis melo]	[more]
gi\|659114478\|ref\|XP_008457071.1\|	7.2e-22	96.30	PREDICTED: protease Do-like 7 isoform X2 [Cucumis melo]	[more]
gi\|659114476\|ref\|XP_008457070.1\|	7.2e-22	96.30	PREDICTED: protease Do-like 7 isoform X1 [Cucumis melo]	[more]
gi\|449464156\|ref\|XP_004149795.1\|	3.6e-21	94.44	PREDICTED: protease Do-like 7 [Cucumis sativus]	[more]
gi\|700202708\|gb\|KGN57841.1\|	3.6e-21	94.44	hypothetical protein Csa_3G346390 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010205	photoinhibition
biological_process	GO:0006508	proteolysis
biological_process	GO:0006486	protein glycosylation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020284T1	MELO3C020284T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22939	SERINE PROTEASE FAMILY S1C HTRA-RELATED	coord: 3..54 score: 2.2
None	No IPR available	PANTHER	PTHR22939:SF66	PRO-APOPTOTIC SERINE PROTEASE NMA111	coord: 3..54 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C020284	CSPI03G21820	Wild cucumber (PI 183967)	cpimeB243
MELO3C020284	CsGy3G021020	Cucumber (Gy14) v2	cgybmeB212

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020284	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C020284	Silver-seed gourd	carmeB0181
MELO3C020284	Silver-seed gourd	carmeB0756
MELO3C020284	Cucumber (Chinese Long) v3	cucmeB249
MELO3C020284	Watermelon (97103) v2	mewmbB434
MELO3C020284	Wax gourd	mewgoB530
MELO3C020284	Cucumber (Gy14) v1	cgymeB343
MELO3C020284	Cucurbita maxima (Rimu)	cmameB243
MELO3C020284	Cucurbita maxima (Rimu)	cmameB431
MELO3C020284	Cucurbita moschata (Rifu)	cmomeB231
MELO3C020284	Cucurbita moschata (Rifu)	cmomeB421
MELO3C020284	Wild cucumber (PI 183967)	cpimeB241
MELO3C020284	Cucumber (Chinese Long) v2	cumeB246
MELO3C020284	Watermelon (Charleston Gray)	mewcgB427
MELO3C020284	Watermelon (97103) v1	mewmB461
MELO3C020284	Cucurbita pepo (Zucchini)	cpemeB529
MELO3C020284	Cucurbita pepo (Zucchini)	cpemeB586