MELO3C020254 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020254
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Importin-like protein
Location	chr6 : 14527164 .. 14528022 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACAAAATCAAGAAAGAAGACGAAGCTTCATTTCAGTTCATACTTTCGATGGCTGGCATTTGCTAGCTCATTCTATTACAGTAGCGAAGTTTCATCGGAGACCGAAATTTTGATAGAGGAACTCTTCATATGGGACAACATTTTTCTTGAGCAATAAGGTCAGAGTTCAGGCTTAATCTGAAAATGGGAATGTCAAGCTCAGATATGGCGGCGATGTACACGCTGCTAATGAATTCAATGAGTGGCGATGAGGGTGTTCGTAAACAGGCAGAGAAGGCGCTATCTGAGACTGATAGTCGGTCTGGGTTTTGCTCGTGTCTCTTGGAACTGATCACTTCGCCGGATTTAGTTTCTCAGGCCGATATTCGTCTCATGGCATCCGTTTATTTGAAGAACAGTATTAATCGATATTGGAGGAGTAATACTAGACGCACAATCCCGAATATCTGGTCCTCCCATCCAGTCCTTTTTTTGTGTTTTCTTTTGTTTCTGACTACTTTTGCATCTTCCCATTCTTATGGTGTTAGTTTACGAGTTTCAGTGGAATTAACAATGATGAGAAGGCACATATCAGGAAGAAGCTCTTGTCCCACTTGAGAGAACCAGATTACAAGGTACGAGTTATTCTTCACCCTCCTGTTTGTCTCTCGCTTAAGGTGAAGAAAAGTAAAGAACAATGCATAAACTGAAAGTGCTTCCTTGACATGTTTTTTCTTTGCATTTCTGTGCGCTAAGTATTTTATTGTTCTATGGGTTATCTATGTTTGCCCCTCAACAGATAGCAGCAATTTTGGCAGTCATCATTTCTAAAATGGCCCGCATTGATTATCCCAAGGAATGGTATTATTTATCTCTATAA

mRNA sequence

AACAAAATCAAGAAAGAAGACGAAGCTTCATTTCAGTTCATACTTTCGATGGCTGGCATTTGCTAGCTCATTCTATTACAGTAGCGAAGTTTCATCGGAGACCGAAATTTTGATAGAGGAACTCTTCATATGGGACAACATTTTTCTTGAGCAATAAGGTCAGAGTTCAGGCTTAATCTGAAAATGGGAATGTCAAGCTCAGATATGGCGGCGATGTACACGCTGCTAATGAATTCAATGAGTGGCGATGAGGGTGTTCGTAAACAGGCAGAGAAGGCGCTATCTGAGACTGATAGTCGGTCTGGGTTTTGCTCGTGTCTCTTGGAACTGATCACTTCGCCGGATTTAGTTTCTCAGGCCGATATTCGTCTCATGGCATCCGTTTATTTGAAGAACAGTATTAATCGATATTGGAGGAGTAATACTAGACGCACAATCCCGAATATCTGTGGAATTAACAATGATGAGAAGGCACATATCAGGAAGAAGCTCTTGTCCCACTTGAGAGAACCAGATTACAAGATAGCAGCAATTTTGGCAGTCATCATTTCTAAAATGGCCCGCATTGATTATCCCAAGGAATGGTATTATTTATCTCTATAA

Coding sequence (CDS)

ATGGGAATGTCAAGCTCAGATATGGCGGCGATGTACACGCTGCTAATGAATTCAATGAGTGGCGATGAGGGTGTTCGTAAACAGGCAGAGAAGGCGCTATCTGAGACTGATAGTCGGTCTGGGTTTTGCTCGTGTCTCTTGGAACTGATCACTTCGCCGGATTTAGTTTCTCAGGCCGATATTCGTCTCATGGCATCCGTTTATTTGAAGAACAGTATTAATCGATATTGGAGGAGTAATACTAGACGCACAATCCCGAATATCTGTGGAATTAACAATGATGAGAAGGCACATATCAGGAAGAAGCTCTTGTCCCACTTGAGAGAACCAGATTACAAGATAGCAGCAATTTTGGCAGTCATCATTTCTAAAATGGCCCGCATTGATTATCCCAAGGAATGGTATTATTTATCTCTATAA

Protein sequence

MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAVIISKMARIDYPKEWYYLSL*

Homology

[Close]

BLAST of MELO3C020254 vs. Swiss-Prot
Match: IPO11_MOUSE (Importin-11 OS=Mus musculus GN=Ipo11 PE=1 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.2e-14
Identity = 44/130 (33.85%), Postives = 77/130 (59.23%), Query Frame = 1


Query: 5   SSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQADIRLM 64
           +S  + +  +L  + S D  V K AE+ L + +++ GF S LL + T+  L    ++R +
Sbjct: 4   NSASSVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTL--DINVRWL 63

Query: 65  ASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAVIISK 124
           A +Y K+ I+RYWR    R  P+   ++ +EK+ +R  L+++  EP  +IA  +AV+I+K
Sbjct: 64  AVLYFKHGIDRYWR----RVAPH--ALSEEEKSTLRAGLITNFNEPINQIATQIAVLIAK 123

Query: 125 MARIDYPKEW 135
           +AR+D P++W
Sbjct: 124 VARLDCPRQW 125

[Close]

BLAST of MELO3C020254 vs. Swiss-Prot
Match: IPO11_HUMAN (Importin-11 OS=Homo sapiens GN=IPO11 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.1e-13
Identity = 44/130 (33.85%), Postives = 75/130 (57.69%), Query Frame = 1


Query: 5   SSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQADIRLM 64
           +S    +  +L  + S D  V K AE+ L + +++ GF S LL + T+  L    ++R +
Sbjct: 4   NSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTL--DINVRWL 63

Query: 65  ASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAVIISK 124
           A +Y K+ I+RYWR    R  P+   ++ +EK  +R  L+++  EP  +IA  +AV+I+K
Sbjct: 64  AVLYFKHGIDRYWR----RVAPH--ALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAK 123

Query: 125 MARIDYPKEW 135
           +AR+D P++W
Sbjct: 124 VARLDCPRQW 125

[Close]

BLAST of MELO3C020254 vs. Swiss-Prot
Match: KA120_YEAST (Importin beta-like protein KAP120 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KAP120 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.0e-08
Identity = 35/110 (31.82%), Postives = 58/110 (52.73%), Query Frame = 1


Query: 25  VRKQAEKALSETDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSINRYWRSNTRRT 84
           V+K AE+ L + ++++GF   L  +  +  L +   IR +A +  KN +++YWRS     
Sbjct: 27  VQKLAEQQLRQWETQAGFHYLLQSIYLN--LSNSLQIRWLAVIQFKNGVDKYWRSTRINA 86

Query: 85  IPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAVIISKMARIDYPKEW 135
           IP       DEKA IR +L   + E + ++    A   +++AR+D+P EW
Sbjct: 87  IP------KDEKASIRGRLFEMIDEQNNQLCIQNAQASARIARLDFPVEW 128

[Close]

BLAST of MELO3C020254 vs. Swiss-Prot
Match: SXM1_YEAST (Importin beta SMX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SXM1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 6.2e-06
Identity = 32/98 (32.65%), Postives = 54/98 (55.10%), Query Frame = 1


Query: 10  AMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQADIRLMASVYL 69
           A+ + +  +M  D  + K+AE+ L E   + GF S LL +++  +     ++RL +++YL
Sbjct: 6   AILSCIEQTMVADAKIIKEAEQQLFEFQKQPGFTSFLLNIVSDDNFA--LNVRLSSAIYL 65

Query: 70  KNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHL 108
           KN I+R W  +T+R      GI  DEK  I+++L+  L
Sbjct: 66  KNKIHRSW--DTKRE----DGIKADEKLSIKERLIETL 95

[Close]

BLAST of MELO3C020254 vs. TrEMBL
Match: A0A0A0LA08_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G313240 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.4e-65
Identity = 126/134 (94.03%), Postives = 132/134 (98.51%), Query Frame = 1


Query: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60
           MGMS+SDMAAMYTLLMNSMSGDE VRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD
Sbjct: 1   MGMSNSDMAAMYTLLMNSMSGDEVVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60

Query: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120
           IRLM+SVYLKNSINRYWRSNTRR+IPNICGI+NDEK HIRKKLLSHLREPDYKIAAILAV
Sbjct: 61  IRLMSSVYLKNSINRYWRSNTRRSIPNICGISNDEKEHIRKKLLSHLREPDYKIAAILAV 120

Query: 121 IISKMARIDYPKEW 135
           +ISK+ARIDYPKEW
Sbjct: 121 VISKLARIDYPKEW 134

[Close]

BLAST of MELO3C020254 vs. TrEMBL
Match: A0A059DCE6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00543 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 9.8e-43
Identity = 91/134 (67.91%), Postives = 109/134 (81.34%), Query Frame = 1


Query: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60
           M +S+SD+ A+Y LL NSMSGDE VRK AE AL E +SR GFCSCL+E+IT+ DL SQ D
Sbjct: 1   MALSASDLPAVYALLANSMSGDERVRKPAEAALGEFESRPGFCSCLMEVITAKDLASQVD 60

Query: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120
           +RLMASVY KNS+NRYWR  TRR  P   GI+ DEKAH+R+KLLSHLRE +Y+IA +LAV
Sbjct: 61  VRLMASVYFKNSVNRYWR--TRRDTP---GISADEKAHLRQKLLSHLREENYQIAVMLAV 120

Query: 121 IISKMARIDYPKEW 135
           +ISK+AR DYPKEW
Sbjct: 121 LISKIARFDYPKEW 129

[Close]

BLAST of MELO3C020254 vs. TrEMBL
Match: A0A059DC37_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00543 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 9.8e-43
Identity = 91/134 (67.91%), Postives = 109/134 (81.34%), Query Frame = 1


Query: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60
           M +S+SD+ A+Y LL NSMSGDE VRK AE AL E +SR GFCSCL+E+IT+ DL SQ D
Sbjct: 1   MALSASDLPAVYALLANSMSGDERVRKPAEAALGEFESRPGFCSCLMEVITAKDLASQVD 60

Query: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120
           +RLMASVY KNS+NRYWR  TRR  P   GI+ DEKAH+R+KLLSHLRE +Y+IA +LAV
Sbjct: 61  VRLMASVYFKNSVNRYWR--TRRDTP---GISADEKAHLRQKLLSHLREENYQIAVMLAV 120

Query: 121 IISKMARIDYPKEW 135
           +ISK+AR DYPKEW
Sbjct: 121 LISKIARFDYPKEW 129

[Close]

BLAST of MELO3C020254 vs. TrEMBL
Match: A0A078I1E1_BRANA (BnaA05g29360D protein OS=Brassica napus GN=BnaA05g29360D PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 9.8e-43
Identity = 90/134 (67.16%), Postives = 111/134 (82.84%), Query Frame = 1


Query: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60
           M +S+SD+ AMY+LL NSMSGDE VR+ AE AL++++SR GFCSCL+E+I S DLVS  D
Sbjct: 1   MALSASDLPAMYSLLANSMSGDENVRRPAEAALAQSESRPGFCSCLMEVIASKDLVSHVD 60

Query: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120
           +RLMASVY KNSINRYW+S  RR   N  GI+N+EK H+R+KLLSHLRE +YKIA +LAV
Sbjct: 61  VRLMASVYFKNSINRYWKS--RR---NASGISNEEKIHLRQKLLSHLREENYKIAEMLAV 120

Query: 121 IISKMARIDYPKEW 135
           +ISK+AR DYPKEW
Sbjct: 121 LISKIARFDYPKEW 129

[Close]

BLAST of MELO3C020254 vs. TrEMBL
Match: M4ELR6_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 9.8e-43
Identity = 90/134 (67.16%), Postives = 111/134 (82.84%), Query Frame = 1


Query: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60
           M +S+SD+ AMY+LL NSMSGDE VR+ AE AL++++SR GFCSCL+E+I S DLVS  D
Sbjct: 1   MALSASDLPAMYSLLANSMSGDENVRRPAEAALAQSESRPGFCSCLMEVIASKDLVSHVD 60

Query: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120
           +RLMASVY KNSINRYW+S  RR   N  GI+N+EK H+R+KLLSHLRE +YKIA +LAV
Sbjct: 61  VRLMASVYFKNSINRYWKS--RR---NASGISNEEKIHLRQKLLSHLREENYKIAEMLAV 120

Query: 121 IISKMARIDYPKEW 135
           +ISK+AR DYPKEW
Sbjct: 121 LISKIARFDYPKEW 129

[Close]

BLAST of MELO3C020254 vs. TAIR10
Match: AT3G08960.1 (AT3G08960.1 ARM repeat superfamily protein)

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-43
Identity = 87/134 (64.93%), Postives = 108/134 (80.60%), Query Frame = 1


Query: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60
           M +S+SD+ AMYTLL NSMSGDE VR+ AE ALS ++SR GFCSCL+E+I S DLVS  D
Sbjct: 1   MALSASDLPAMYTLLANSMSGDETVRRPAEAALSLSESRPGFCSCLMEVIASKDLVSHVD 60

Query: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120
           +RLMASVY KNSINR+W+S  RR   N   ++N+EK+H+R+KLLSHLRE +Y+IA +LAV
Sbjct: 61  VRLMASVYFKNSINRHWKS--RR---NSWSMSNEEKSHLRQKLLSHLREENYQIAEMLAV 120

Query: 121 IISKMARIDYPKEW 135
           +ISK+AR DYP+EW
Sbjct: 121 LISKIARFDYPREW 129

[Close]

BLAST of MELO3C020254 vs. TAIR10
Match: AT1G26170.1 (AT1G26170.1 ARM repeat superfamily protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-10
Identity = 39/120 (32.50%), Postives = 64/120 (53.33%), Query Frame = 1


Query: 15  LMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQADIRLMASVYLKNSIN 74
           L  S+  ++ VR  AE +L++   + GF S L  +  + DL     +R +A+V LK  I 
Sbjct: 14  LSASLDPNQNVRSFAETSLNQASLQPGFGSALCRVAANKDL--SLGLRQLAAVLLKQFIK 73

Query: 75  RYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAVIISKMARIDYPKEW 134
           ++WR N       +  ++++EKA IR +LL  L +   KI   +++ IS +A  D+P+EW
Sbjct: 74  KHWRENEEAFEYPL--VSSEEKALIRGQLLGSLDDSHRKICTAISMDISSIATYDWPEEW 129

[Close]

BLAST of MELO3C020254 vs. NCBI nr
Match: gi|659114414|ref|XP_008457041.1| (PREDICTED: importin-11 [Cucumis melo])

HSP 1 Score: 267.7 bits (683), Expect = 1.1e-68
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 1


Query: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60
           MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD
Sbjct: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60

Query: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120
           IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV
Sbjct: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120

Query: 121 IISKMARIDYPKEW 135
           IISKMARIDYPKEW
Sbjct: 121 IISKMARIDYPKEW 134

[Close]

BLAST of MELO3C020254 vs. NCBI nr
Match: gi|778680809|ref|XP_011651399.1| (PREDICTED: importin-11 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 7.7e-65
Identity = 126/134 (94.03%), Postives = 132/134 (98.51%), Query Frame = 1


Query: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60
           MGMS+SDMAAMYTLLMNSMSGDE VRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD
Sbjct: 1   MGMSNSDMAAMYTLLMNSMSGDEVVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60

Query: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120
           IRLM+SVYLKNSINRYWRSNTRR+IPNICGI+NDEK HIRKKLLSHLREPDYKIAAILAV
Sbjct: 61  IRLMSSVYLKNSINRYWRSNTRRSIPNICGISNDEKEHIRKKLLSHLREPDYKIAAILAV 120

Query: 121 IISKMARIDYPKEW 135
           +ISK+ARIDYPKEW
Sbjct: 121 VISKLARIDYPKEW 134

[Close]

BLAST of MELO3C020254 vs. NCBI nr
Match: gi|700202676|gb|KGN57809.1| (hypothetical protein Csa_3G313240 [Cucumis sativus])

HSP 1 Score: 255.0 bits (650), Expect = 7.7e-65
Identity = 126/134 (94.03%), Postives = 132/134 (98.51%), Query Frame = 1


Query: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60
           MGMS+SDMAAMYTLLMNSMSGDE VRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD
Sbjct: 1   MGMSNSDMAAMYTLLMNSMSGDEVVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60

Query: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120
           IRLM+SVYLKNSINRYWRSNTRR+IPNICGI+NDEK HIRKKLLSHLREPDYKIAAILAV
Sbjct: 61  IRLMSSVYLKNSINRYWRSNTRRSIPNICGISNDEKEHIRKKLLSHLREPDYKIAAILAV 120

Query: 121 IISKMARIDYPKEW 135
           +ISK+ARIDYPKEW
Sbjct: 121 VISKLARIDYPKEW 134

[Close]

BLAST of MELO3C020254 vs. NCBI nr
Match: gi|729395574|ref|XP_010553104.1| (PREDICTED: importin-11 [Tarenaya hassleriana])

HSP 1 Score: 186.0 bits (471), Expect = 4.4e-44
Identity = 92/134 (68.66%), Postives = 115/134 (85.82%), Query Frame = 1


Query: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60
           M +S+SD+ AMY+LL NSMSGDEGVR+ AE ALS+++SR GFCSCL+E+ITS DLVS  D
Sbjct: 1   MALSASDLPAMYSLLANSMSGDEGVRRPAEAALSQSESRPGFCSCLMEVITSKDLVSHVD 60

Query: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120
           +RLMASVYLKNSINRYWRS  RR  P   GI+N+EK ++R+KLLSHLRE +Y+IA +LAV
Sbjct: 61  VRLMASVYLKNSINRYWRS--RRNSP---GISNEEKLYLRQKLLSHLREENYQIAELLAV 120

Query: 121 IISKMARIDYPKEW 135
           ++SK+ARIDYP+EW
Sbjct: 121 LVSKIARIDYPREW 129

[Close]

BLAST of MELO3C020254 vs. NCBI nr
Match: gi|702238775|ref|XP_010033090.1| (PREDICTED: importin-11 [Eucalyptus grandis])

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-42
Identity = 91/134 (67.91%), Postives = 109/134 (81.34%), Query Frame = 1


Query: 1   MGMSSSDMAAMYTLLMNSMSGDEGVRKQAEKALSETDSRSGFCSCLLELITSPDLVSQAD 60
           M +S+SD+ A+Y LL NSMSGDE VRK AE AL E +SR GFCSCL+E+IT+ DL SQ D
Sbjct: 1   MALSASDLPAVYALLANSMSGDERVRKPAEAALGEFESRPGFCSCLMEVITAKDLASQVD 60

Query: 61  IRLMASVYLKNSINRYWRSNTRRTIPNICGINNDEKAHIRKKLLSHLREPDYKIAAILAV 120
           +RLMASVY KNS+NRYWR  TRR  P   GI+ DEKAH+R+KLLSHLRE +Y+IA +LAV
Sbjct: 61  VRLMASVYFKNSVNRYWR--TRRDTP---GISADEKAHLRQKLLSHLREENYQIAVMLAV 120

Query: 121 IISKMARIDYPKEW 135
           +ISK+AR DYPKEW
Sbjct: 121 LISKIARFDYPKEW 129

The following BLAST results are available for this feature:

BLAST of MELO3C020254 vs. Swiss-Prot


Match Name	E-value	Identity	Description
IPO11_MOUSE	6.2e-14	33.85	Importin-11 OS=Mus musculus GN=Ipo11 PE=1 SV=1	[more]
IPO11_HUMAN	1.1e-13	33.85	Importin-11 OS=Homo sapiens GN=IPO11 PE=1 SV=1	[more]
KA120_YEAST	3.0e-08	31.82	Importin beta-like protein KAP120 OS=Saccharomyces cerevisiae (strain ATCC 20450...	[more]
SXM1_YEAST	6.2e-06	32.65	Importin beta SMX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=S...	[more]

BLAST of MELO3C020254 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA08_CUCSA	5.4e-65	94.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G313240 PE=4 SV=1	[more]
A0A059DCE6_EUCGR	9.8e-43	67.91	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00543 PE=4 SV=1	[more]
A0A059DC37_EUCGR	9.8e-43	67.91	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00543 PE=4 SV=1	[more]
A0A078I1E1_BRANA	9.8e-43	67.16	BnaA05g29360D protein OS=Brassica napus GN=BnaA05g29360D PE=4 SV=1	[more]
M4ELR6_BRARP	9.8e-43	67.16	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]

BLAST of MELO3C020254 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G08960.1	1.4e-43	64.93	ARM repeat superfamily protein	[more]
AT1G26170.1	1.2e-10	32.50	ARM repeat superfamily protein	[more]

BLAST of MELO3C020254 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114414\|ref\|XP_008457041.1\|	1.1e-68	100.00	PREDICTED: importin-11 [Cucumis melo]	[more]
gi\|778680809\|ref\|XP_011651399.1\|	7.7e-65	94.03	PREDICTED: importin-11 [Cucumis sativus]	[more]
gi\|700202676\|gb\|KGN57809.1\|	7.7e-65	94.03	hypothetical protein Csa_3G313240 [Cucumis sativus]	[more]
gi\|729395574\|ref\|XP_010553104.1\|	4.4e-44	68.66	PREDICTED: importin-11 [Tarenaya hassleriana]	[more]
gi\|702238775\|ref\|XP_010033090.1\|	1.4e-42	67.91	PREDICTED: importin-11 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001494	Importin-beta_N
IPR011989	ARM-like
IPR016024	ARM-type_fold

Vocabulary: **Biological Process**
Term	Definition
GO:0006886	intracellular protein transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0008536	Ran GTPase binding
GO:0005488	binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0042991	transcription factor import into nucleus
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005635	nuclear envelope
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008536	Ran GTPase binding
molecular_function	GO:0005488	binding
molecular_function	GO:0008565	protein transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020254T1	MELO3C020254T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001494	Importin-beta, N-terminal domain	PFAM	PF03810	IBN_N	coord: 29..107 score: 5.8
IPR001494	Importin-beta, N-terminal domain	SMART	SM00913	IBN_N_2	coord: 29..109 score: 1.0
IPR001494	Importin-beta, N-terminal domain	PROFILE	PS50166	IMPORTIN_B_NT	coord: 29..109 score: 17
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 5..135 score: 8.1
IPR016024	Armadillo-type fold	unknown	SSF48371	ARM repeat	coord: 3..135 score: 2.07
None	No IPR available	PANTHER	PTHR10997	IMPORTIN-7, 8, 11	coord: 3..134 score: 1.1
None	No IPR available	PANTHER	PTHR10997:SF7	IMPORTIN-11	coord: 3..134 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C020254	Csa3G313240	Cucumber (Chinese Long) v2	cumeB246
MELO3C020254	Cla013195	Watermelon (97103) v1	mewmB461
MELO3C020254	ClCG05G011270	Watermelon (Charleston Gray)	mewcgB427
MELO3C020254	Cla97C05G093420	Watermelon (97103) v2	mewmbB434
MELO3C020254	Bhi01G001509	Wax gourd	mewgoB542
MELO3C020254	CSPI03G21440	Wild cucumber (PI 183967)	cpimeB243
MELO3C020254	Cucsa.375360	Cucumber (Gy14) v1	cgymeB609
MELO3C020254	CmaCh01G003660	Cucurbita maxima (Rimu)	cmameB431
MELO3C020254	CmoCh01G003830	Cucurbita moschata (Rifu)	cmomeB421
MELO3C020254	Lsi05G003330	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C020254	Cp4.1LG02g16940	Cucurbita pepo (Zucchini)	cpemeB529
MELO3C020254	CsGy3G020720	Cucumber (Gy14) v2	cgybmeB212
MELO3C020254	Carg07453	Silver-seed gourd	carmeB0756
MELO3C020254	CsaV3_3G021150	Cucumber (Chinese Long) v3	cucmeB249

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020254	Cucurbita maxima (Rimu)	cmameB243
MELO3C020254	Cucurbita moschata (Rifu)	cmomeB231
MELO3C020254	Cucurbita pepo (Zucchini)	cpemeB586
MELO3C020254	Silver-seed gourd	carmeB0515