MELO3C020248 (gene) Melon (DHL92) v3.5.1

NameMELO3C020248
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description3-ketoacyl-CoA synthase 9
Locationchr6 : 14632911 .. 14633288 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAGGATGATCATATCGATGATGATTCTATCAACTACAACCACATTGAAGATGAAGATGATGATTCTATCGAATTCAATTGCATTGAAGATGAAAAAGATGATGATCCTCTCAACTGCGTCTCATTAAAGATGAATATGATGATCGTCTTGGTTGCACCATATTGAAGATGAGGATGATGATCGTCTCGACTGGTCGCATGTCTTTGCTGCACCACATTGAAGATGAAGATGATGATCGACCGCATTGAAGACGAAAATGAAGATGATCCTCTCGGCTGTAGCCGCATTGAAGACGAAGATAAAGATGATCCTCTCGACTGTGACGACATTGAAGACGAAGATGATAATCCTCTTGACTGTAACATATGGTAA

mRNA sequence

ATGGAAAAGGATGATCATATCGATGATGATTCTATCAACTACAACCACATTGAAGATGAAGATGATGATTCTATCGAATTCAATTGCATTGAAGATGAAAAAGATGATGATCCTCTCAACTGCGTCTCATTAAAGATGAATATGATGATCGTCTTGATGAAGATGATGATCGACCGCATTGAAGACGAAAATGAAGATGATCCTCTCGGCTGTAGCCGCATTGAAGACGAAGATAAAGATGATCCTCTCGACTGTGACGACATTGAAGACGAAGATGATAATCCTCTTGACTGTAACATATGGTAA

Coding sequence (CDS)

ATGGAAAAGGATGATCATATCGATGATGATTCTATCAACTACAACCACATTGAAGATGAAGATGATGATTCTATCGAATTCAATTGCATTGAAGATGAAAAAGATGATGATCCTCTCAACTGCGTCTCATTAAAGATGAATATGATGATCGTCTTGATGAAGATGATGATCGACCGCATTGAAGACGAAAATGAAGATGATCCTCTCGGCTGTAGCCGCATTGAAGACGAAGATAAAGATGATCCTCTCGACTGTGACGACATTGAAGACGAAGATGATAATCCTCTTGACTGTAACATATGGTAA

Protein sequence

MEKDDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLDCNIW*
BLAST of MELO3C020248 vs. NCBI nr
Match: gi|659127358|ref|XP_008463661.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-16
Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 1

Query: 4   DDHIDDDSINYNHIEDED-DDSIEFNCIEDEKDD-DPLNCVSLKMNMMIVLMKMMIDRIE 63
           +D   DD++++  IEDED DD + ++ IEDE +D DP  C                  IE
Sbjct: 109 EDEGKDDTLDFLRIEDEDEDDPLGYDIIEDENEDHDPFGC----------------GNIE 168

Query: 64  DENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLDCN 100
           DE++DDPL C  IEDED+DDPLDC+ IEDEDD+PL CN
Sbjct: 169 DEDKDDPLDCGYIEDEDEDDPLDCNSIEDEDDDPLSCN 190

BLAST of MELO3C020248 vs. NCBI nr
Match: gi|659127358|ref|XP_008463661.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-16
Identity = 64/149 (42.95%), Postives = 79/149 (53.02%), Query Frame = 1

Query: 2   EKDDHI--------DDDSINYNHIEDEDDDSI--------------EFNCIEDEKD-DDP 61
           +KDD I        DDDSIN+N IEDEDDD I              + +C++++KD DDP
Sbjct: 29  KKDDPINFNRIKDEDDDSINFNRIEDEDDDPIGCDRIKDKDDDHLCDDDCLDEDKDEDDP 88

Query: 62  LNCVSLKM----------NMMIVLMKMMID--RIEDENEDDPL---------------GC 100
           L+C  ++           N+        +D  RIEDE+EDDPL               GC
Sbjct: 89  LSCSDIEYEDEDDPFGCGNIEDEGKDDTLDFLRIEDEDEDDPLGYDIIEDENEDHDPFGC 148


HSP 2 Score: 49.7 bits (117), Expect = 3.6e-03
Identity = 24/51 (47.06%), Postives = 38/51 (74.51%), Query Frame = 1

Query: 4   DDHIDDDSINYNHIEDED-DDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLM 54
           +D   DD ++  +IEDED DD ++ N IE ++DDDPL+C +LKM MM++++
Sbjct: 152 EDEDKDDPLDCGYIEDEDEDDPLDCNSIE-DEDDDPLSCNTLKMKMMMMIL 201


HSP 3 Score: 93.6 bits (231), Expect = 2.2e-16
Identity = 59/111 (53.15%), Postives = 69/111 (62.16%), Query Frame = 1

Query: 2   EKDDHID-------DDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLM- 61
           E DD ID       DDSI+ +HIED+DDD I ++  EDE DDD L CV+LKM MMIV + 
Sbjct: 44  EDDDFIDFYIEDEDDDSIDCDHIEDKDDDPIGWDRFEDE-DDDRLGCVALKMKMMIVSVI 103

Query: 62  -------KMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLD 98
                   +  D IEDE+E DP  C  IEDED DD L    IEDEDD+PLD
Sbjct: 104 FEDGDDDPLGYDNIEDEDE-DPFSCGCIEDED-DDSLSYSHIEDEDDDPLD 151

BLAST of MELO3C020248 vs. NCBI nr
Match: gi|659114284|ref|XP_008456992.1| (PREDICTED: prostatic spermine-binding protein-like [Cucumis melo])

HSP 1 Score: 79.7 bits (195), Expect = 3.2e-12
Identity = 49/98 (50.00%), Postives = 61/98 (62.24%), Query Frame = 1

Query: 1  MEKDDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLMKMMIDRI 60
          MEKDD IDDD I++N I+DEDDDSI+F  IEDE DD     +  + +  I         I
Sbjct: 1  MEKDDLIDDDPIDFNRIKDEDDDSIDF-YIEDEDDDSIDFYIENEDDDFIDFY------I 60

Query: 61 EDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLDC 99
          EDE +DD + C  IED+D DDP+  D  EDEDD+ L C
Sbjct: 61 EDE-DDDSIDCDHIEDKD-DDPIGWDRFEDEDDDRLGC 89


HSP 2 Score: 75.9 bits (185), Expect = 4.7e-11
Identity = 53/144 (36.81%), Postives = 66/144 (45.83%), Query Frame = 1

Query: 1   MEKDDHIDDDSINYNHIEDEDDDSIEFNCIEDE-----------------------KDDD 60
           MEKDD IDDD I++N I+DEDDDSI+F  IEDE                       +DDD
Sbjct: 1   MEKDDLIDDDPIDFNRIKDEDDDSIDFY-IEDEDDDSIDFYIENEDDDFIDFYIEDEDDD 60

Query: 61  PLNCVSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDED------------------- 99
            ++C                D IED+ +DDP+G  R EDED                   
Sbjct: 61  SIDC----------------DHIEDK-DDDPIGWDRFEDEDDDRLGCVALKMKMMIVSVI 120


HSP 3 Score: 82.8 bits (203), Expect = 3.8e-13
Identity = 54/133 (40.60%), Postives = 68/133 (51.13%), Query Frame = 1

Query: 1   MEKDDHIDDDSINYNHIEDEDDDSIEFNCIED--------------------EKDDDPLN 60
           ME D  I+DD I+ N I+DEDDDSI++N IED                    E +DDP +
Sbjct: 7   MENDTLINDDPIDLNCIKDEDDDSIDYNYIEDGDDHLDYEDEDPFGWGQIQDEDEDDPFS 66

Query: 61  CVSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLD------------CDDI 102
              ++        +   D IED++ED PL C  IEDED+ DPL             C  I
Sbjct: 67  YDHIEDEDEDNPFEN--DFIEDKDEDYPLDCGCIEDEDEYDPLSYGCIEDEDEPPCCGRI 126

BLAST of MELO3C020248 vs. NCBI nr
Match: gi|659083329|ref|XP_008442294.1| (PREDICTED: protein bfr2-like [Cucumis melo])

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-11
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 1

Query: 4   DDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLMKMMIDRIEDE 63
           DD  +D S+N ++I+DE D  ++++ IEDE +DDPLN                IDR ED+
Sbjct: 251 DDEHEDASLNLDNIKDEYDP-LDYDRIEDEDEDDPLN----------------IDRSEDK 310

Query: 64  NEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPLDCNIW 102
           +++DPLG   I+DE  DD L    I+DEDD+PLDCN W
Sbjct: 311 DDNDPLGFRCIKDE-VDDTLGFGRIKDEDDHPLDCNKW 330

BLAST of MELO3C020248 vs. NCBI nr
Match: gi|659083329|ref|XP_008442294.1| (PREDICTED: protein bfr2-like [Cucumis melo])

HSP 1 Score: 75.9 bits (185), Expect = 4.7e-11
Identity = 41/86 (47.67%), Postives = 53/86 (61.63%), Query Frame = 1

Query: 9   DDSINYNHIEDED-DDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLMKMMIDRIEDENEDD 68
           DD  +Y+HIEDED DD + + CIEDE +DD L C   +        +   D ++   ED 
Sbjct: 109 DDPFDYSHIEDEDEDDPLGYVCIEDEDEDDLLGCGCSQD-------EDEDDLLDYSYEDH 168

Query: 69  PLGCSRIEDEDKDDPLDCDDIEDEDD 94
           PLGC  IE++D DDPL CD I+DEDD
Sbjct: 169 PLGCDCIENKDDDDPLICDRIKDEDD 187


HSP 2 Score: 75.5 bits (184), Expect = 6.1e-11
Identity = 42/97 (43.30%), Postives = 59/97 (60.82%), Query Frame = 1

Query: 4   DDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLMKMMIDRIEDE 63
           +D   DD++NY  +ED+DD   +++ IEDE +DDPL  V ++      L+     + EDE
Sbjct: 92  EDENKDDALNYGCMEDKDDP-FDYSHIEDEDEDDPLGYVCIEDEDEDDLLGCGCSQDEDE 151

Query: 64  N-------EDDPLGCSRIEDEDKDDPLDCDDIEDEDD 94
           +       ED PLGC  IE++D DDPL CD I+DEDD
Sbjct: 152 DDLLDYSYEDHPLGCDCIENKDDDDPLICDRIKDEDD 187


HSP 3 Score: 73.6 bits (179), Expect = 2.3e-10
Identity = 47/111 (42.34%), Postives = 62/111 (55.86%), Query Frame = 1

Query: 7   IDDDSINYNHIEDEDDDSIE-FNC--IEDEKDDDPLNCVSLKMNMMIVLMKMMIDRIEDE 66
           ++ D   Y+ IEDE  D  + F C  I+DE +D  LN  ++K         +  DRIEDE
Sbjct: 224 VEFDPFCYDRIEDEGKDEDDPFGCRRIDDEHEDASLNLDNIKDEYD----PLDYDRIEDE 283

Query: 67  NEDDPLGCSRIEDEDKDDPL-------DCDD------IEDEDDNPLDCNIW 102
           +EDDPL   R ED+D +DPL       + DD      I+DEDD+PLDCN W
Sbjct: 284 DEDDPLNIDRSEDKDDNDPLGFRCIKDEVDDTLGFGRIKDEDDHPLDCNKW 330


HSP 4 Score: 71.2 bits (173), Expect = 1.1e-09
Identity = 45/106 (42.45%), Postives = 62/106 (58.49%), Query Frame = 1

Query: 8   DDDSINYNHIEDEDDDS-IEFNCIEDEKDDDPLNCVSLKMNMMIVLMKMMIDRIEDE--N 67
           +DD      IEDED+D  ++F  I+D+ ++DPL+C  +++           DRIEDE  +
Sbjct: 185 EDDLFYCGCIEDEDEDGPLDFVLIKDKDENDPLSCGRIEVEFD----PFCYDRIEDEGKD 244

Query: 68  EDDPLGCSRIEDEDKD------------DPLDCDDIEDED-DNPLD 98
           EDDP GC RI+DE +D            DPLD D IEDED D+PL+
Sbjct: 245 EDDPFGCRRIDDEHEDASLNLDNIKDEYDPLDYDRIEDEDEDDPLN 286


HSP 5 Score: 70.9 bits (172), Expect = 1.5e-09
Identity = 45/98 (45.92%), Postives = 58/98 (59.18%), Query Frame = 1

Query: 9   DDSINYNHIEDED-DDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLMK-------MMIDRI 68
           DD  +Y+HIEDED DD + + CIEDE +DD L C   +      L+        +  D I
Sbjct: 109 DDPFDYSHIEDEDEDDPLGYVCIEDEDEDDLLGCGCSQDEDEDDLLDYSYEDHPLGCDCI 168

Query: 69  EDENEDDPLGCSRIEDEDKDDPLDCDDIEDED-DNPLD 98
           E++++DDPL C RI+DE  DD   C  IEDED D PLD
Sbjct: 169 ENKDDDDPLICDRIKDE--DDLFYCGCIEDEDEDGPLD 204


HSP 6 Score: 69.7 bits (169), Expect = 3.3e-09
Identity = 48/115 (41.74%), Postives = 61/115 (53.04%), Query Frame = 1

Query: 8   DDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLK----------MNMMIVLMKMMI 67
           DDD +  + I+DEDD      CIEDE +D PL+ V +K            + +       
Sbjct: 173 DDDPLICDRIKDEDD-LFYCGCIEDEDEDGPLDFVLIKDKDENDPLSCGRIEVEFDPFCY 232

Query: 68  DRIEDE--NEDDPLGCSRIEDEDKD------------DPLDCDDIEDED-DNPLD 98
           DRIEDE  +EDDP GC RI+DE +D            DPLD D IEDED D+PL+
Sbjct: 233 DRIEDEGKDEDDPFGCRRIDDEHEDASLNLDNIKDEYDPLDYDRIEDEDEDDPLN 286


HSP 7 Score: 62.8 bits (151), Expect = 4.1e-07
Identity = 39/101 (38.61%), Postives = 56/101 (55.45%), Query Frame = 1

Query: 3   KDDHIDD------DSINYNHIEDED-DDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLMKM 62
           +D+H DD      D ++ +  EDE+ DD++ + C+ED+  DDP +               
Sbjct: 71  EDEHEDDPLGCGHDLLDCSRNEDENKDDALNYGCMEDK--DDPFD--------------- 130

Query: 63  MIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIEDEDDNPL 97
               IEDE+EDDPLG   IEDED+DD L C   +DED++ L
Sbjct: 131 -YSHIEDEDEDDPLGYVCIEDEDEDDLLGCGCSQDEDEDDL 153


HSP 8 Score: 62.8 bits (151), Expect = 4.1e-07
Identity = 37/83 (44.58%), Postives = 48/83 (57.83%), Query Frame = 1

Query: 17 IEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLMKMMIDRIEDENEDDPLGCSRIED 76
          IE+E++  + F+C   E +D+PL+C S                IED +EDDP  C RIED
Sbjct: 16 IEEENEKDL-FSCDYIEDEDNPLDCGS----------------IEDYDEDDPFCCGRIED 75

Query: 77 EDKDDPLDCDDIEDE-DDNPLDC 99
          ED  DPL C  IEDE +D+PL C
Sbjct: 76 EDGYDPLCCGHIEDEHEDDPLGC 81


HSP 9 Score: 62.4 bits (150), Expect = 5.3e-07
Identity = 44/118 (37.29%), Postives = 58/118 (49.15%), Query Frame = 1

Query: 4   DDHIDDDSINYNHIEDED-DDSIEFNCIEDEKDDD---------PLNCVSLKMNMMIVLM 63
           +D  +DD + Y  IEDED DD +   C +DE +DD         PL C            
Sbjct: 118 EDEDEDDPLGYVCIEDEDEDDLLGCGCSQDEDEDDLLDYSYEDHPLGC------------ 177

Query: 64  KMMIDRIEDENEDDPLGCSRI------------EDEDKDDPLDCDDIEDEDDN-PLDC 99
               D IE++++DDPL C RI            EDED+D PLD   I+D+D+N PL C
Sbjct: 178 ----DCIENKDDDDPLICDRIKDEDDLFYCGCIEDEDEDGPLDFVLIKDKDENDPLSC 219


HSP 10 Score: 62.0 bits (149), Expect = 7.0e-07
Identity = 44/106 (41.51%), Postives = 55/106 (51.89%), Query Frame = 1

Query: 4   DDHIDDDSINYNHIEDEDD-DSIEFNCIEDEKDDDPLNCVSLKMNMMIVLMKMMIDRIED 63
           +D+ +DD      IEDED  D +    IEDE +DDPL C    ++           R ED
Sbjct: 43  EDYDEDDPFCCGRIEDEDGYDPLCCGHIEDEHEDDPLGCGHDLLDC---------SRNED 102

Query: 64  ENEDDPL--GC----------SRIEDEDKDDPLDCDDIEDEDDNPL 97
           EN+DD L  GC          S IEDED+DDPL    IEDED++ L
Sbjct: 103 ENKDDALNYGCMEDKDDPFDYSHIEDEDEDDPLGYVCIEDEDEDDL 139


HSP 11 Score: 59.7 bits (143), Expect = 3.4e-06
Identity = 47/111 (42.34%), Postives = 58/111 (52.25%), Query Frame = 1

Query: 2   EKD----DHIDDDS--INYNHIEDEDDDSIEFNC--IEDEKDDDPLNCVSLKMNMMIVLM 61
           EKD    D+I+D+   ++   IED D+D   F C  IEDE   DPL C            
Sbjct: 21  EKDLFSCDYIEDEDNPLDCGSIEDYDEDD-PFCCGRIEDEDGYDPLCC------------ 80

Query: 62  KMMIDRIEDENEDDPLG-------CSRIEDEDKDDPLDCDDIEDEDDNPLD 98
                 IEDE+EDDPLG       CSR EDE+KDD L+   +ED+DD P D
Sbjct: 81  ----GHIEDEHEDDPLGCGHDLLDCSRNEDENKDDALNYGCMEDKDD-PFD 113


HSP 12 Score: 55.8 bits (133), Expect = 5.0e-05
Identity = 42/132 (31.82%), Postives = 59/132 (44.70%), Query Frame = 1

Query: 4   DDHIDDDSINYNHIEDEDDDSI------------------------EFNCIEDEKDDDPL 63
           +D  +DD + Y  IEDED+D +                          +CIE++ DDDPL
Sbjct: 118 EDEDEDDPLGYVCIEDEDEDDLLGCGCSQDEDEDDLLDYSYEDHPLGCDCIENKDDDDPL 177

Query: 64  NCVSLKMNMMIVLMKMMIDR----------IEDENEDDPLGCSRIEDEDKDDPLDCDDIE 99
            C  +K    +     + D           I+D++E+DPL C RIE E   DP   D IE
Sbjct: 178 ICDRIKDEDDLFYCGCIEDEDEDGPLDFVLIKDKDENDPLSCGRIEVE--FDPFCYDRIE 237


HSP 13 Score: 44.7 bits (104), Expect = 1.1e-01
Identity = 23/51 (45.10%), Postives = 32/51 (62.75%), Query Frame = 1

Query: 49 MIVLMKMMIDRIEDENEDDPLGCSRIEDEDKDDPLDCDDIED-EDDNPLDC 99
          +I+    ++  IE+ENE D   C  IEDE  D+PLDC  IED ++D+P  C
Sbjct: 5  IILSTATILKTIEEENEKDLFSCDYIEDE--DNPLDCGSIEDYDEDDPFCC 53


HSP 14 Score: 59.7 bits (143), Expect = 3.4e-06
Identity = 33/92 (35.87%), Postives = 51/92 (55.43%), Query Frame = 1

Query: 2   EKDDHIDDDSINYNHIEDEDDDSIEFNCIEDEKDDDPLNCVSLKMNMMIVLMKMMIDRIE 61
           + DD  DDD  + +  +D+DDD       +D+ DDD      + M MM+++ +    R +
Sbjct: 16  DDDDDDDDDDDDGDDDDDDDDDD------DDDDDDDNKGVGVMMMMMMMMMRRRRRRRRD 75

Query: 62  DENEDDPLGCSRIEDEDKDDPLDCDDIEDEDD 94
           DEN+DD  G    +D+D DD  D DD +D+DD
Sbjct: 76  DENDDDDDGDDDDDDDDDDDDDDDDDDDDDDD 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659127358|ref|XP_008463661.1|1.3e-1648.98PREDICTED: prostatic spermine-binding protein-like [Cucumis melo][more]
gi|659127358|ref|XP_008463661.1|1.7e-1642.95PREDICTED: prostatic spermine-binding protein-like [Cucumis melo][more]
gi|659114284|ref|XP_008456992.1|3.2e-1250.00PREDICTED: prostatic spermine-binding protein-like [Cucumis melo][more]
gi|659083329|ref|XP_008442294.1|2.1e-1144.90PREDICTED: protein bfr2-like [Cucumis melo][more]
gi|659083329|ref|XP_008442294.1|4.7e-1147.67PREDICTED: protein bfr2-like [Cucumis melo][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020248T1MELO3C020248T1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None