MELO3C020217 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C020217
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPhosphoglycerate kinase family protein
Locationchr6 : 15353819 .. 15354010 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGTCTCAGCCACATGATCAACCTCCATAAGAACAAAGCTGAAGAGAAATGCCTCAAAACTCATAATATGAAAACATTCTTTAAGGAGGAAGAAATGGAAGTTGAGAACGAAATTGAAGAAGAAGAAGAAGCTGAGAAGTTGAGTTCCTTAACCCGTAAAAGGAAAAAGCGAGGACAAGACCTCTAG

mRNA sequence

ATGACAAGTCTCAGCCACATGATCAACCTCCATAAGAACAAAGCTGAAGAGAAATGCCTCAAAACTCATAATATGAAAACATTCTTTAAGGAGGAAGAAATGGAAGTTGAGAACGAAATTGAAGAAGAAGAAGAAGCTGAGAAGTTGAGTTCCTTAACCCGTAAAAGGAAAAAGCGAGGACAAGACCTCTAG

Coding sequence (CDS)

ATGACAAGTCTCAGCCACATGATCAACCTCCATAAGAACAAAGCTGAAGAGAAATGCCTCAAAACTCATAATATGAAAACATTCTTTAAGGAGGAAGAAATGGAAGTTGAGAACGAAATTGAAGAAGAAGAAGAAGCTGAGAAGTTGAGTTCCTTAACCCGTAAAAGGAAAAAGCGAGGACAAGACCTCTAG

Protein sequence

MTSLSHMINLHKNKAEEKCLKTHNMKTFFKEEEMEVENEIEEEEEAEKLSSLTRKRKKRGQDL*
Homology
[Close]
BLAST of MELO3C020217 vs. TrEMBL
Match: A0A0A0KTK5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G406560 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.8e-07
Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 1 

Query: 1  MTSLSHMINLHKNKAEEKCLKTHNMKTFFKEEEMEVENEIEEEEEAEKLSSLTRKRKKRG 60
          MT L+ MINLHKNKAE K LK+  M+T  + +EMEV+N+ EEE E EK + L  KRK + 
Sbjct: 1  MTGLNCMINLHKNKAERKRLKSKKMETIVENKEMEVDND-EEEREKEKQTPLVHKRKGKD 60

Query: 61 Q 62
          +
Sbjct: 61 E 60

[Close]
BLAST of MELO3C020217 vs. NCBI nr
Match: gi|700195834|gb|KGN51011.1| (hypothetical protein Csa_5G406560 [Cucumis sativus])

HSP 1 Score: 62.8 bits (151), Expect = 2.6e-07
Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 1 

Query: 1  MTSLSHMINLHKNKAEEKCLKTHNMKTFFKEEEMEVENEIEEEEEAEKLSSLTRKRKKRG 60
          MT L+ MINLHKNKAE K LK+  M+T  + +EMEV+N+ EEE E EK + L  KRK + 
Sbjct: 1  MTGLNCMINLHKNKAERKRLKSKKMETIVENKEMEVDND-EEEREKEKQTPLVHKRKGKD 60

Query: 61 Q 62
          +
Sbjct: 61 E 60

The following BLAST results are available for this feature:
BLAST of MELO3C020217 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTK5_CUCSA1.8e-0754.10Uncharacterized protein OS=Cucumis sativus GN=Csa_5G406560 PE=4 SV=1[more]
BLAST of MELO3C020217 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700195834|gb|KGN51011.1|2.6e-0754.10hypothetical protein Csa_5G406560 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020217T1MELO3C020217T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 26..49
scor